Protein ID | Ani_SJS100_1|g202.t1 |
Gene name | |
Location | scaffold_001:660948..663455 |
Strand | - |
Gene length (bp) | 2507 |
Transcript length (bp) | 2454 |
Coding sequence length (bp) | 2454 |
Protein length (aa) | 818 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF17390 | Bac_rhamnosid_C | Bacterial alpha-L-rhamnosidase C-terminal domain | 1.0E-13 | 718 | 788 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 19 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g202.t1 MRIYPGLALLVPSVVCGALYAPSSQPTYQRKTYTLAAGDPLPVSNGTVYKLSSNGSSPAIVILDYGKDVEGYATF EVTRQSGDTSCFEMSYGETREAMDLYMADGPIPFSAAMDTYRINRYNISQPTVQVNRLIQGGLRYQKLNLSSAGE LEIKALGFKPTVDSTPVSHLPGSFACSDPALSRIWNVGARTVQLNEFPANSLPNFWVISDEGAFIDSLSPQPFAA DYAAMLTAYELDFTVKPVKNGFGFTVLSDTLGNGIYILVNAANSSISAYAGPTEVGSPVLASAVLPFPVTLNNWH TVESTVNLTQISVMIDGAPVFNFTQNSAFYGSFGLGASFQQAAVFTNVSLTVSGTQMYSSSLSDESALQDFLVGT NPLPVSVDGSRRDRIAYGGDLDITTSSSFASTYGREYINGTITLLGSARMLPGFFMPNVKVQQPPRTSDIQANIT GLISYSFNLVSAMAQYYEQTGDSVFLSKWAPKAAGLLDWAHSQTLPNGIFNISNPIFGGDWNHYDPSVSGIVSKF NLVYAYALNQWLPIMTAGGLNATLYASRLRSLQNAINSELWSDSLQAYYLSDSHRDFFSQEANALAILSGTASSG PEDRTQAILASMSRELYVPAGALSFSNKSAAYGWAQKISPYASGYHLKAAFQANDSANAKRLLYSLWGPMSDPTH KTYTGCYWEVLDSDGTPGLDIGTSLCHAWSAGPTADLSRYVLGVQPVTPGFRQWQVAPQSFELGWAEGKYPTPQG ALSVKWSFGKNGFVLMQVNSPSGTNGTVYLPQPLQKEIGSYHVSGGVPNGKGGFIVQGTNFTFRQTS* |
Coding | >Ani_SJS100_1|g202.t1 ATGAGGATTTATCCTGGTTTGGCCCTTCTAGTACCCTCCGTCGTCTGCGGAGCGCTCTATGCTCCTTCGTCTCAG CCGACCTATCAACGGAAGACCTACACACTCGCAGCTGGCGATCCATTGCCGGTGAGTAATGGTACAGTTTATAAG TTGTCTTCCAATGGAAGCAGCCCTGCCATTGTCATTCTAGACTATGGTAAAGATGTGGAAGGATACGCTACGTTT GAGGTGACCCGACAGAGTGGTGACACCTCCTGTTTCGAGATGTCATATGGCGAGACACGTGAAGCTATGGACCTG TACATGGCTGATGGACCTATCCCCTTTTCCGCAGCTATGGACACCTACCGCATCAATAGATACAACATCAGCCAG CCGACGGTGCAAGTAAACCGCCTTATTCAGGGAGGTCTGCGGTATCAGAAACTAAACCTGTCCAGTGCTGGGGAG CTTGAAATCAAGGCTCTAGGGTTTAAGCCAACGGTCGATAGCACGCCCGTGTCTCACCTGCCAGGTTCTTTTGCA TGTTCAGACCCTGCTCTGAGCCGCATCTGGAACGTTGGTGCTCGCACCGTTCAACTAAATGAATTCCCCGCCAAT TCATTGCCAAACTTTTGGGTGATTTCTGACGAAGGCGCATTTATCGATAGCCTGAGTCCTCAGCCCTTCGCAGCG GACTATGCGGCTATGTTGACGGCTTATGAGCTGGACTTTACCGTGAAACCTGTAAAGAATGGCTTCGGTTTCACG GTGCTCAGTGACACCCTTGGAAATGGGATCTACATTCTTGTCAATGCAGCTAATTCATCAATATCAGCCTACGCG GGCCCCACAGAAGTCGGCTCACCAGTGCTTGCGTCGGCTGTCCTCCCATTTCCTGTGACTTTGAACAACTGGCAT ACCGTTGAGTCTACCGTCAACCTTACTCAGATATCAGTGATGATCGACGGGGCGCCAGTATTCAACTTTACCCAG AACAGCGCATTCTACGGCTCATTTGGCTTAGGGGCCTCCTTCCAACAGGCTGCTGTTTTCACCAATGTCTCTTTG ACAGTCTCCGGGACCCAGATGTATTCCTCGTCCCTCTCAGACGAATCTGCCTTACAGGACTTCTTGGTGGGAACC AATCCACTGCCAGTAAGCGTGGATGGTTCGCGAAGAGACCGCATCGCTTATGGAGGGGATCTTGATATAACCACT TCTTCCTCTTTTGCAAGTACGTACGGCCGCGAATATATCAATGGGACCATTACTCTTCTCGGGTCAGCACGTATG CTGCCTGGCTTTTTCATGCCTAATGTCAAAGTGCAACAACCCCCTCGCACCAGCGACATTCAGGCCAACATTACG GGATTGATCAGTTATTCGTTCAATCTGGTGAGCGCTATGGCACAGTATTACGAACAGACCGGGGACTCTGTTTTC CTCTCAAAGTGGGCCCCCAAGGCAGCTGGTTTACTTGATTGGGCTCACTCACAGACGTTACCCAACGGCATTTTC AATATCTCCAACCCGATATTTGGTGGGGACTGGAATCACTATGACCCTTCAGTGAGCGGTATTGTCTCCAAATTC AATCTCGTCTATGCCTATGCTCTCAACCAATGGCTCCCCATCATGACTGCTGGCGGCTTGAACGCTACTCTGTAC GCATCCCGGTTGCGATCGCTGCAAAACGCAATCAATTCCGAGCTTTGGAGCGACTCCCTCCAAGCTTACTACCTA TCTGACTCGCATAGAGACTTCTTTTCTCAGGAAGCCAATGCCCTCGCCATCCTTAGTGGCACCGCATCATCTGGA CCAGAAGACAGAACGCAGGCCATCCTCGCCAGTATGTCGAGGGAGCTTTACGTTCCTGCTGGAGCACTGTCCTTT TCTAATAAGAGTGCTGCATACGGATGGGCACAGAAGATCAGCCCCTACGCCTCTGGGTATCACTTGAAGGCAGCA TTCCAAGCCAATGACAGCGCTAATGCAAAGCGCCTTCTTTACAGTCTCTGGGGTCCAATGAGCGACCCTACTCAT AAAACTTATACGGGATGTTACTGGGAGGTATTGGACAGCGATGGGACCCCGGGACTAGACATTGGTACTTCCCTC TGCCATGCTTGGAGTGCGGGACCTACGGCCGATCTGAGCCGTTATGTTTTGGGAGTTCAACCCGTGACGCCCGGC TTTAGACAGTGGCAGGTTGCACCTCAATCTTTCGAACTTGGCTGGGCTGAGGGCAAGTACCCAACCCCCCAAGGT GCTCTCAGTGTTAAGTGGTCGTTTGGAAAGAATGGCTTCGTTCTAATGCAAGTTAACTCACCGAGCGGAACGAAT GGCACCGTCTATCTACCCCAGCCCCTTCAGAAGGAGATAGGCTCTTATCACGTCTCCGGTGGAGTCCCAAATGGA AAAGGAGGTTTCATAGTTCAGGGGACGAACTTCACCTTCCGCCAAACAAGCTGA |
Transcript | >Ani_SJS100_1|g202.t1 ATGAGGATTTATCCTGGTTTGGCCCTTCTAGTACCCTCCGTCGTCTGCGGAGCGCTCTATGCTCCTTCGTCTCAG CCGACCTATCAACGGAAGACCTACACACTCGCAGCTGGCGATCCATTGCCGGTGAGTAATGGTACAGTTTATAAG TTGTCTTCCAATGGAAGCAGCCCTGCCATTGTCATTCTAGACTATGGTAAAGATGTGGAAGGATACGCTACGTTT GAGGTGACCCGACAGAGTGGTGACACCTCCTGTTTCGAGATGTCATATGGCGAGACACGTGAAGCTATGGACCTG TACATGGCTGATGGACCTATCCCCTTTTCCGCAGCTATGGACACCTACCGCATCAATAGATACAACATCAGCCAG CCGACGGTGCAAGTAAACCGCCTTATTCAGGGAGGTCTGCGGTATCAGAAACTAAACCTGTCCAGTGCTGGGGAG CTTGAAATCAAGGCTCTAGGGTTTAAGCCAACGGTCGATAGCACGCCCGTGTCTCACCTGCCAGGTTCTTTTGCA TGTTCAGACCCTGCTCTGAGCCGCATCTGGAACGTTGGTGCTCGCACCGTTCAACTAAATGAATTCCCCGCCAAT TCATTGCCAAACTTTTGGGTGATTTCTGACGAAGGCGCATTTATCGATAGCCTGAGTCCTCAGCCCTTCGCAGCG GACTATGCGGCTATGTTGACGGCTTATGAGCTGGACTTTACCGTGAAACCTGTAAAGAATGGCTTCGGTTTCACG GTGCTCAGTGACACCCTTGGAAATGGGATCTACATTCTTGTCAATGCAGCTAATTCATCAATATCAGCCTACGCG GGCCCCACAGAAGTCGGCTCACCAGTGCTTGCGTCGGCTGTCCTCCCATTTCCTGTGACTTTGAACAACTGGCAT ACCGTTGAGTCTACCGTCAACCTTACTCAGATATCAGTGATGATCGACGGGGCGCCAGTATTCAACTTTACCCAG AACAGCGCATTCTACGGCTCATTTGGCTTAGGGGCCTCCTTCCAACAGGCTGCTGTTTTCACCAATGTCTCTTTG ACAGTCTCCGGGACCCAGATGTATTCCTCGTCCCTCTCAGACGAATCTGCCTTACAGGACTTCTTGGTGGGAACC AATCCACTGCCAGTAAGCGTGGATGGTTCGCGAAGAGACCGCATCGCTTATGGAGGGGATCTTGATATAACCACT TCTTCCTCTTTTGCAAGTACGTACGGCCGCGAATATATCAATGGGACCATTACTCTTCTCGGGTCAGCACGTATG CTGCCTGGCTTTTTCATGCCTAATGTCAAAGTGCAACAACCCCCTCGCACCAGCGACATTCAGGCCAACATTACG GGATTGATCAGTTATTCGTTCAATCTGGTGAGCGCTATGGCACAGTATTACGAACAGACCGGGGACTCTGTTTTC CTCTCAAAGTGGGCCCCCAAGGCAGCTGGTTTACTTGATTGGGCTCACTCACAGACGTTACCCAACGGCATTTTC AATATCTCCAACCCGATATTTGGTGGGGACTGGAATCACTATGACCCTTCAGTGAGCGGTATTGTCTCCAAATTC AATCTCGTCTATGCCTATGCTCTCAACCAATGGCTCCCCATCATGACTGCTGGCGGCTTGAACGCTACTCTGTAC GCATCCCGGTTGCGATCGCTGCAAAACGCAATCAATTCCGAGCTTTGGAGCGACTCCCTCCAAGCTTACTACCTA TCTGACTCGCATAGAGACTTCTTTTCTCAGGAAGCCAATGCCCTCGCCATCCTTAGTGGCACCGCATCATCTGGA CCAGAAGACAGAACGCAGGCCATCCTCGCCAGTATGTCGAGGGAGCTTTACGTTCCTGCTGGAGCACTGTCCTTT TCTAATAAGAGTGCTGCATACGGATGGGCACAGAAGATCAGCCCCTACGCCTCTGGGTATCACTTGAAGGCAGCA TTCCAAGCCAATGACAGCGCTAATGCAAAGCGCCTTCTTTACAGTCTCTGGGGTCCAATGAGCGACCCTACTCAT AAAACTTATACGGGATGTTACTGGGAGGTATTGGACAGCGATGGGACCCCGGGACTAGACATTGGTACTTCCCTC TGCCATGCTTGGAGTGCGGGACCTACGGCCGATCTGAGCCGTTATGTTTTGGGAGTTCAACCCGTGACGCCCGGC TTTAGACAGTGGCAGGTTGCACCTCAATCTTTCGAACTTGGCTGGGCTGAGGGCAAGTACCCAACCCCCCAAGGT GCTCTCAGTGTTAAGTGGTCGTTTGGAAAGAATGGCTTCGTTCTAATGCAAGTTAACTCACCGAGCGGAACGAAT GGCACCGTCTATCTACCCCAGCCCCTTCAGAAGGAGATAGGCTCTTATCACGTCTCCGGTGGAGTCCCAAATGGA AAAGGAGGTTTCATAGTTCAGGGGACGAACTTCACCTTCCGCCAAACAAGCTGA |
Gene | >Ani_SJS100_1|g202.t1 ATGAGGATTTATCCTGGTTTGGCCCTTCTAGTACCCTCCGTCGTCTGCGGAGCGCTCTATGCTCCTTCGTCTCAG CCGACCTATCAACGGAAGACCTACACACTCGCAGCTGGCGATCCATTGCCGGTGAGTAATGGTACAGTTTATAAG TTGTCTTCCAATGGAAGCAGCCCTGCCATTGTCATTCTAGACTATGGTAAAGATGTGGAAGGATACGCTACGTTT GAGGTGACCCGACAGAGTGGTGACACCTCCTGTTTCGAGATGTCATATGGCGAGACACGTGAAGCTATGGACCTG TACATGGTACGTGTATGGACCAGTTATGGGAACCATGAACGCTGACACTACCATCCCAGGCTGATGGACCTATCC CCTTTTCCGCAGCTATGGACACCTACCGCATCAATAGATACAACATCAGCCAGCCGACGGTGCAAGTAAACCGCC TTATTCAGGGAGGTCTGCGGTATCAGAAACTAAACCTGTCCAGTGCTGGGGAGCTTGAAATCAAGGCTCTAGGGT TTAAGCCAACGGTCGATAGCACGCCCGTGTCTCACCTGCCAGGTTCTTTTGCATGTTCAGACCCTGCTCTGAGCC GCATCTGGAACGTTGGTGCTCGCACCGTTCAACTAAATGAATTCCCCGCCAATTCATTGCCAAACTTTTGGGTGA TTTCTGACGAAGGCGCATTTATCGATAGCCTGAGTCCTCAGCCCTTCGCAGCGGACTATGCGGCTATGTTGACGG CTTATGAGCTGGACTTTACCGTGAAACCTGTAAAGAATGGCTTCGGTTTCACGGTGCTCAGTGACACCCTTGGAA ATGGGATCTACATTCTTGTCAATGCAGCTAATTCATCAATATCAGCCTACGCGGGCCCCACAGAAGTCGGCTCAC CAGTGCTTGCGTCGGCTGTCCTCCCATTTCCTGTGACTTTGAACAACTGGCATACCGTTGAGTCTACCGTCAACC TTACTCAGATATCAGTGATGATCGACGGGGCGCCAGTATTCAACTTTACCCAGAACAGCGCATTCTACGGCTCAT TTGGCTTAGGGGCCTCCTTCCAACAGGCTGCTGTTTTCACCAATGTCTCTTTGACAGTCTCCGGGACCCAGATGT ATTCCTCGTCCCTCTCAGACGAATCTGCCTTACAGGACTTCTTGGTGGGAACCAATCCACTGCCAGTAAGCGTGG ATGGTTCGCGAAGAGACCGCATCGCTTATGGAGGGGATCTTGATATAACCACTTCTTCCTCTTTTGCAAGTACGT ACGGCCGCGAATATATCAATGGGACCATTACTCTTCTCGGGTCAGCACGTATGCTGCCTGGCTTTTTCATGCCTA ATGTCAAAGTGCAACAACCCCCTCGCACCAGCGACATTCAGGCCAACATTACGGGATTGATCAGTTATTCGTTCA ATCTGGTGAGCGCTATGGCACAGTATTACGAACAGACCGGGGACTCTGTTTTCCTCTCAAAGTGGGCCCCCAAGG CAGCTGGTTTACTTGATTGGGCTCACTCACAGACGTTACCCAACGGCATTTTCAATATCTCCAACCCGATATTTG GTGGGGACTGGAATCACTATGACCCTTCAGTGAGCGGTATTGTCTCCAAATTCAATCTCGTCTATGCCTATGCTC TCAACCAATGGCTCCCCATCATGACTGCTGGCGGCTTGAACGCTACTCTGTACGCATCCCGGTTGCGATCGCTGC AAAACGCAATCAATTCCGAGCTTTGGAGCGACTCCCTCCAAGCTTACTACCTATCTGACTCGCATAGAGACTTCT TTTCTCAGGAAGCCAATGCCCTCGCCATCCTTAGTGGCACCGCATCATCTGGACCAGAAGACAGAACGCAGGCCA TCCTCGCCAGTATGTCGAGGGAGCTTTACGTTCCTGCTGGAGCACTGTCCTTTTCTAATAAGAGTGCTGCATACG GATGGGCACAGAAGATCAGCCCCTACGCCTCTGGGTATCACTTGAAGGCAGCATTCCAAGCCAATGACAGCGCTA ATGCAAAGCGCCTTCTTTACAGTCTCTGGGGTCCAATGAGCGACCCTACTCATAAAACTTATACGGGATGTTACT GGGAGGTATTGGACAGCGATGGGACCCCGGGACTAGACATTGGTACTTCCCTCTGCCATGCTTGGAGTGCGGGAC CTACGGCCGATCTGAGCCGTTATGTTTTGGGAGTTCAACCCGTGACGCCCGGCTTTAGACAGTGGCAGGTTGCAC CTCAATCTTTCGAACTTGGCTGGGCTGAGGGCAAGTACCCAACCCCCCAAGGTGCTCTCAGTGTTAAGTGGTCGT TTGGAAAGAATGGCTTCGTTCTAATGCAAGTTAACTCACCGAGCGGAACGAATGGCACCGTCTATCTACCCCAGC CCCTTCAGAAGGAGATAGGCTCTTATCACGTCTCCGGTGGAGTCCCAAATGGAAAAGGAGGTTTCATAGTTCAGG GGACGAACTTCACCTTCCGCCAAACAAGCTGA |