Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g1958.t1
Gene name
Location	scaffold_007:537551..538392
Strand	-
Gene length (bp)	841
Transcript length (bp)	786
Coding sequence length (bp)	786
Protein length (aa)	262

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 52	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	10	29	19
2	41	60	19
3	70	92	22
4	105	127	22
5	142	164	22
6	176	195	19
7	215	237	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g1958.t1 MGTVTYRDGIAILQLVVFPFIFGAAIFIWNRAGWRVGSRIWRYPATLSLIRIAGSIASLLSINHDSKNVEIAIAV CELIGLAPLLLTYVGVLRQIDINQVVPVKWLNIVTIVGIIGLIIGIAGVSTASDNGGSYQPTNTVKASMAIFIAL FVIYHLLAAFMYLQMGHLKAFQKKLFLSIIFSTPFILVRVVYAAIGDFTTIERFSIISTNGSPTIYLVMDVLEEI VAMAITMFLGMSAVLEPDFVRLTPAQLDSEPKPEVA*
Coding	>Ani_SJS100_1\|g1958.t1 ATGGGCACCGTGACTTACCGTGATGGCATTGCTATCTTGCAACTTGTTGTCTTTCCCTTTATCTTCGGTGCTGCA ATCTTCATATGGAACCGGGCTGGCTGGAGGGTCGGGAGCAGAATCTGGCGATACCCTGCTACGCTCTCTCTCATT CGAATCGCGGGCAGTATCGCATCGCTGTTGTCAATCAATCATGATTCCAAGAACGTCGAGATTGCCATCGCAGTA TGCGAGTTGATTGGTCTCGCACCTCTATTGTTGACCTATGTCGGAGTTCTCAGACAAATTGATATCAATCAAGTA GTCCCCGTCAAATGGCTCAACATTGTGACTATAGTTGGTATCATCGGTCTCATCATCGGTATTGCGGGTGTCAGT ACCGCAAGTGACAACGGAGGCAGCTACCAGCCAACCAACACCGTCAAAGCATCCATGGCAATTTTTATCGCTCTT TTTGTGATTTATCATCTGCTCGCCGCTTTTATGTACCTCCAGATGGGTCATTTGAAGGCCTTCCAAAAGAAGTTG TTCCTCTCCATCATCTTCTCCACTCCTTTCATCTTGGTCCGCGTCGTCTACGCAGCGATCGGCGACTTCACCACC ATCGAGCGGTTCTCCATCATCAGCACTAATGGAAGCCCCACCATCTACCTGGTCATGGATGTGCTGGAAGAAATT GTTGCCATGGCTATCACGATGTTTTTGGGCATGTCGGCTGTGCTTGAGCCTGACTTTGTGCGCCTGACCCCGGCC CAGTTGGACTCTGAGCCGAAGCCTGAGGTCGCGTAA
Transcript	>Ani_SJS100_1\|g1958.t1 ATGGGCACCGTGACTTACCGTGATGGCATTGCTATCTTGCAACTTGTTGTCTTTCCCTTTATCTTCGGTGCTGCA ATCTTCATATGGAACCGGGCTGGCTGGAGGGTCGGGAGCAGAATCTGGCGATACCCTGCTACGCTCTCTCTCATT CGAATCGCGGGCAGTATCGCATCGCTGTTGTCAATCAATCATGATTCCAAGAACGTCGAGATTGCCATCGCAGTA TGCGAGTTGATTGGTCTCGCACCTCTATTGTTGACCTATGTCGGAGTTCTCAGACAAATTGATATCAATCAAGTA GTCCCCGTCAAATGGCTCAACATTGTGACTATAGTTGGTATCATCGGTCTCATCATCGGTATTGCGGGTGTCAGT ACCGCAAGTGACAACGGAGGCAGCTACCAGCCAACCAACACCGTCAAAGCATCCATGGCAATTTTTATCGCTCTT TTTGTGATTTATCATCTGCTCGCCGCTTTTATGTACCTCCAGATGGGTCATTTGAAGGCCTTCCAAAAGAAGTTG TTCCTCTCCATCATCTTCTCCACTCCTTTCATCTTGGTCCGCGTCGTCTACGCAGCGATCGGCGACTTCACCACC ATCGAGCGGTTCTCCATCATCAGCACTAATGGAAGCCCCACCATCTACCTGGTCATGGATGTGCTGGAAGAAATT GTTGCCATGGCTATCACGATGTTTTTGGGCATGTCGGCTGTGCTTGAGCCTGACTTTGTGCGCCTGACCCCGGCC CAGTTGGACTCTGAGCCGAAGCCTGAGGTCGCGTAA
Gene	>Ani_SJS100_1\|g1958.t1 ATGGGCACCGTGACTTACCGTGATGGCATTGCTATCTTGCAACTTGTTGTCTTTCCCTTTATCTTCGGTGCTGCA ATCTTCATATGGAACCGGGCTGGCTGGAGGGTCGGGAGCAGAATCTGGCGATACCCTGCTACGCTCTCTCTCATT CGAATCGCGGGCAGTATCGCATCGCTGTTGTCAATCAATCATGATTCCAAGAACGTCGAGATTGCCATCGCAGTA TGCGAGTTGATTGGTCTCGCACCTCTATTGTTGACCTATGTCGGAGTTCTCAGACAAATGTGAGTCCCCTCAGAT AAGCCGCAGAGATACACATGAAGCTAACACTTCTACTAGTGATATCAATCAAGTAGTCCCCGTCAAATGGCTCAA CATTGTGACTATAGTTGGTATCATCGGTCTCATCATCGGTATTGCGGGTGTCAGTACCGCAAGTGACAACGGAGG CAGCTACCAGCCAACCAACACCGTCAAAGCATCCATGGCAATTTTTATCGCTCTTTTTGTGATTTATCATCTGCT CGCCGCTTTTATGTACCTCCAGATGGGTCATTTGAAGGCCTTCCAAAAGAAGTTGTTCCTCTCCATCATCTTCTC CACTCCTTTCATCTTGGTCCGCGTCGTCTACGCAGCGATCGGCGACTTCACCACCATCGAGCGGTTCTCCATCAT CAGCACTAATGGAAGCCCCACCATCTACCTGGTCATGGATGTGCTGGAAGAAATTGTTGCCATGGCTATCACGAT GTTTTTGGGCATGTCGGCTGTGCTTGAGCCTGACTTTGTGCGCCTGACCCCGGCCCAGTTGGACTCTGAGCCGAA GCCTGAGGTCGCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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