© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g1930.t1 |
| Gene name | |
| Location | scaffold_007:454097..455556 |
| Strand | - |
| Gene length (bp) | 1459 |
| Transcript length (bp) | 1356 |
| Coding sequence length (bp) | 1356 |
| Protein length (aa) | 452 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05730 | CFEM | CFEM domain | 1.1E-04 | 34 | 98 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 235 | 254 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1930.t1 MNLQQAIQHFFSINTQQADSDDAISRSHLVAHKLGEIPRCSLNCLYPLILSTCSHTDYTCLCTNLPTVAATAQFQ SCFHECPINPDQRLTPNSLLSLCNVFDIHPTLPEYMAPIINLNRRGEYINEVRTIYSIVTTIYASTQSTSEPTST EDPLATATAGVVSSIDSDDTSSSTIAPTTSSDDDTATTTSQQPNVVTVTETRLVSTMYMTSVATQTSSSDHKDAA GLSTGAKAGIGVAVPIAVAIIALLIFAWFQRRRKRKQQMGGINSSEESGQASAIQHAGGKNQSMTQNTTNLLPEI DGAPLNESDSRPVHSSADRPVFELSTGSVRKPRRGDPEIGSGVGGISGVDAKQGASGGEVASSASATLGEVPAEL SSDGVRDGESIASVVAYERMSSSELQEELARVARSRERLQYLQTLEEREDMIRRVLAGHGEDAVSRAESREDGGG G* |
| Coding | >Ani_SJS100_1|g1930.t1 ATGAACCTGCAACAAGCTATACAGCATTTCTTCTCAATCAACACACAACAAGCAGATTCTGACGATGCTATCTCT CGAAGTCATCTCGTCGCTCACAAGCTCGGCGAAATCCCCCGCTGCTCATTAAACTGCCTCTATCCTCTTATCCTC TCCACCTGCTCCCATACCGACTACACATGTCTGTGCACCAACTTACCAACAGTAGCAGCGACTGCACAATTTCAA TCATGTTTCCACGAATGTCCCATCAACCCCGACCAGCGATTAACACCCAACTCCCTTCTCTCCCTCTGCAACGTC TTCGACATCCATCCAACCCTCCCAGAATACATGGCGCCAATAATCAATCTCAACCGGCGAGGCGAGTACATCAAC GAGGTGCGGACCATCTATTCCATCGTGACAACAATCTACGCATCCACACAATCAACATCCGAACCAACATCAACC GAAGACCCATTAGCAACAGCCACCGCGGGAGTGGTCTCGAGCATCGACTCGGACGATACATCCTCCTCTACCATC GCTCCCACGACATCCTCAGATGACGACACCGCCACAACAACATCCCAACAACCCAACGTCGTCACAGTAACAGAG ACTCGTCTCGTCTCCACAATGTATATGACCTCAGTAGCAACGCAAACATCTTCCTCCGATCATAAAGATGCAGCT GGTCTATCCACCGGCGCAAAGGCCGGAATAGGAGTCGCGGTGCCCATCGCTGTTGCCATCATCGCGCTTCTAATA TTTGCCTGGTTTCAGCGGCGCAGGAAGAGGAAGCAGCAGATGGGAGGTATTAATAGTAGCGAAGAGAGCGGACAG GCTTCAGCGATACAGCATGCAGGGGGGAAGAATCAAAGTATGACTCAGAACACTACGAATTTGCTCCCTGAGATC GACGGTGCGCCACTCAACGAATCCGATAGTCGGCCCGTACATAGCTCGGCTGATCGGCCTGTGTTTGAGCTGAGT ACTGGGTCGGTTCGCAAGCCGAGGCGGGGTGATCCGGAGATTGGATCTGGGGTTGGTGGGATAAGTGGAGTGGAT GCTAAGCAGGGTGCTAGTGGAGGTGAAGTAGCTTCATCAGCCTCGGCTACATTGGGCGAAGTACCGGCTGAACTA TCGTCTGATGGCGTTAGGGACGGGGAATCGATAGCGTCAGTGGTGGCATATGAAAGGATGAGTTCGTCTGAGTTG CAGGAGGAATTGGCTAGGGTGGCGAGGAGTAGAGAGCGATTGCAGTATTTACAGACGTTGGAGGAGAGGGAGGAT ATGATTCGGAGGGTGCTTGCGGGGCATGGGGAGGATGCGGTGTCAAGGGCTGAGAGTCGGGAAGACGGCGGTGGT GGGTGA |
| Transcript | >Ani_SJS100_1|g1930.t1 ATGAACCTGCAACAAGCTATACAGCATTTCTTCTCAATCAACACACAACAAGCAGATTCTGACGATGCTATCTCT CGAAGTCATCTCGTCGCTCACAAGCTCGGCGAAATCCCCCGCTGCTCATTAAACTGCCTCTATCCTCTTATCCTC TCCACCTGCTCCCATACCGACTACACATGTCTGTGCACCAACTTACCAACAGTAGCAGCGACTGCACAATTTCAA TCATGTTTCCACGAATGTCCCATCAACCCCGACCAGCGATTAACACCCAACTCCCTTCTCTCCCTCTGCAACGTC TTCGACATCCATCCAACCCTCCCAGAATACATGGCGCCAATAATCAATCTCAACCGGCGAGGCGAGTACATCAAC GAGGTGCGGACCATCTATTCCATCGTGACAACAATCTACGCATCCACACAATCAACATCCGAACCAACATCAACC GAAGACCCATTAGCAACAGCCACCGCGGGAGTGGTCTCGAGCATCGACTCGGACGATACATCCTCCTCTACCATC GCTCCCACGACATCCTCAGATGACGACACCGCCACAACAACATCCCAACAACCCAACGTCGTCACAGTAACAGAG ACTCGTCTCGTCTCCACAATGTATATGACCTCAGTAGCAACGCAAACATCTTCCTCCGATCATAAAGATGCAGCT GGTCTATCCACCGGCGCAAAGGCCGGAATAGGAGTCGCGGTGCCCATCGCTGTTGCCATCATCGCGCTTCTAATA TTTGCCTGGTTTCAGCGGCGCAGGAAGAGGAAGCAGCAGATGGGAGGTATTAATAGTAGCGAAGAGAGCGGACAG GCTTCAGCGATACAGCATGCAGGGGGGAAGAATCAAAGTATGACTCAGAACACTACGAATTTGCTCCCTGAGATC GACGGTGCGCCACTCAACGAATCCGATAGTCGGCCCGTACATAGCTCGGCTGATCGGCCTGTGTTTGAGCTGAGT ACTGGGTCGGTTCGCAAGCCGAGGCGGGGTGATCCGGAGATTGGATCTGGGGTTGGTGGGATAAGTGGAGTGGAT GCTAAGCAGGGTGCTAGTGGAGGTGAAGTAGCTTCATCAGCCTCGGCTACATTGGGCGAAGTACCGGCTGAACTA TCGTCTGATGGCGTTAGGGACGGGGAATCGATAGCGTCAGTGGTGGCATATGAAAGGATGAGTTCGTCTGAGTTG CAGGAGGAATTGGCTAGGGTGGCGAGGAGTAGAGAGCGATTGCAGTATTTACAGACGTTGGAGGAGAGGGAGGAT ATGATTCGGAGGGTGCTTGCGGGGCATGGGGAGGATGCGGTGTCAAGGGCTGAGAGTCGGGAAGACGGCGGTGGT GGGTGA |
| Gene | >Ani_SJS100_1|g1930.t1 ATGAACCTGCAACAAGCTATACAGCATTTCTTCTCAATCAACACACAACAAGCAGATTCTGACGATGCTATCTCT CGAAGTCATCTCGTCGCTCACAAGCTCGGCGAAATCCCCCGCTGCTCAGTACTGGCCCCGGTCTACCACCTAACC TCCTACTAACCTCTTGCACATAGTTAAACTGCCTCTATCCTCTTATCCTCTCCACCTGCTCCCATACCGACTACA CATGTCTGTGCACCAACTTACCAACAGTAGCAGCGACTGCACAATTTCAATCATGTTTCCACGAATGTCCCATCA ACCCCGACCAGCGATGTCAGTACATCCCTCTCCCTACCTAACCGACGCCCTAACTCACAAGTAAACAGTAACACC CAACTCCCTTCTCTCCCTCTGCAACGTCTTCGACATCCATCCAACCCTCCCAGAATACATGGCGCCAATAATCAA TCTCAACCGGCGAGGCGAGTACATCAACGAGGTGCGGACCATCTATTCCATCGTGACAACAATCTACGCATCCAC ACAATCAACATCCGAACCAACATCAACCGAAGACCCATTAGCAACAGCCACCGCGGGAGTGGTCTCGAGCATCGA CTCGGACGATACATCCTCCTCTACCATCGCTCCCACGACATCCTCAGATGACGACACCGCCACAACAACATCCCA ACAACCCAACGTCGTCACAGTAACAGAGACTCGTCTCGTCTCCACAATGTATATGACCTCAGTAGCAACGCAAAC ATCTTCCTCCGATCATAAAGATGCAGCTGGTCTATCCACCGGCGCAAAGGCCGGAATAGGAGTCGCGGTGCCCAT CGCTGTTGCCATCATCGCGCTTCTAATATTTGCCTGGTTTCAGCGGCGCAGGAAGAGGAAGCAGCAGATGGGAGG TATTAATAGTAGCGAAGAGAGCGGACAGGCTTCAGCGATACAGCATGCAGGGGGGAAGAATCAAAGTATGACTCA GAACACTACGAATTTGCTCCCTGAGATCGACGGTGCGCCACTCAACGAATCCGATAGTCGGCCCGTACATAGCTC GGCTGATCGGCCTGTGTTTGAGCTGAGTACTGGGTCGGTTCGCAAGCCGAGGCGGGGTGATCCGGAGATTGGATC TGGGGTTGGTGGGATAAGTGGAGTGGATGCTAAGCAGGGTGCTAGTGGAGGTGAAGTAGCTTCATCAGCCTCGGC TACATTGGGCGAAGTACCGGCTGAACTATCGTCTGATGGCGTTAGGGACGGGGAATCGATAGCGTCAGTGGTGGC ATATGAAAGGATGAGTTCGTCTGAGTTGCAGGAGGAATTGGCTAGGGTGGCGAGGAGTAGAGAGCGATTGCAGTA TTTACAGACGTTGGAGGAGAGGGAGGATATGATTCGGAGGGTGCTTGCGGGGCATGGGGAGGATGCGGTGTCAAG GGCTGAGAGTCGGGAAGACGGCGGTGGTGGGTGA |