Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g1926.t1
Gene name
Location	scaffold_007:443128..443902
Strand	-
Gene length (bp)	774
Transcript length (bp)	774
Coding sequence length (bp)	774
Protein length (aa)	258

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01300	Sua5_yciO_yrdC	Telomere recombination	9.7E-13	25	193

GO

GO Term	Description	Terminal node
GO:0003725	double-stranded RNA binding	Yes
GO:0003676	nucleic acid binding	No
GO:0005488	binding	No
GO:1901363	heterocyclic compound binding	No
GO:0097159	organic cyclic compound binding	No
GO:0003723	RNA binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 49	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g1926.t1 MAPRFIPEQGTAPNVPRDAKQTYDTLKNGGVVIIPTDVGYALLTSTQAGVQQIFSAKDRREGHNIGIIGTYKQHY EIHVLSEAKFEMTRVLTEDMAMIVGIIAKYDTENLHPRLAALDPATLSQVTKGDTVSIAVPEGPFLRELGRLCDD DPTGMLMFGTSANLTGQGQRFRVEDIEPKVINAVDLVVDYGLQKWQVYKRGGMNFDAENMRVLRKGAGYEVFRDR MLRWFPHLLEEAGVTMEEDPECQTSEPKTAGY*
Coding	>Ani_SJS100_1\|g1926.t1 ATGGCTCCCCGTTTCATACCCGAACAAGGCACTGCGCCTAATGTCCCTCGCGATGCTAAGCAGACCTACGACACT CTAAAAAACGGTGGAGTCGTCATCATCCCAACCGATGTCGGCTATGCACTCTTGACGAGCACGCAGGCTGGAGTC CAGCAGATATTCTCAGCCAAAGATCGCCGAGAGGGTCACAACATCGGTATCATCGGGACATACAAACAGCATTAT GAGATTCACGTGCTCTCGGAGGCCAAATTCGAGATGACACGGGTTCTGACTGAAGATATGGCGATGATTGTCGGG ATCATTGCCAAATATGATACCGAAAATCTTCACCCGCGTTTGGCAGCTCTCGATCCGGCGACGCTATCGCAAGTC ACGAAGGGCGATACAGTCAGTATAGCAGTCCCTGAAGGCCCATTCTTGCGAGAACTGGGTCGCCTTTGCGACGAT GATCCGACGGGTATGTTGATGTTCGGAACTTCTGCCAATCTGACAGGCCAAGGACAGCGATTCCGGGTCGAGGAC ATTGAGCCCAAGGTGATCAACGCGGTAGACTTGGTGGTGGATTACGGCCTACAGAAATGGCAAGTGTACAAGCGC GGTGGTATGAATTTCGATGCGGAGAATATGAGGGTGCTGCGGAAGGGAGCCGGATATGAAGTCTTTCGCGACCGG ATGTTGAGATGGTTCCCTCATTTGCTGGAGGAAGCTGGTGTTACTATGGAGGAGGATCCAGAATGTCAAACCAGC GAGCCGAAAACTGCAGGCTATTAG
Transcript	>Ani_SJS100_1\|g1926.t1 ATGGCTCCCCGTTTCATACCCGAACAAGGCACTGCGCCTAATGTCCCTCGCGATGCTAAGCAGACCTACGACACT CTAAAAAACGGTGGAGTCGTCATCATCCCAACCGATGTCGGCTATGCACTCTTGACGAGCACGCAGGCTGGAGTC CAGCAGATATTCTCAGCCAAAGATCGCCGAGAGGGTCACAACATCGGTATCATCGGGACATACAAACAGCATTAT GAGATTCACGTGCTCTCGGAGGCCAAATTCGAGATGACACGGGTTCTGACTGAAGATATGGCGATGATTGTCGGG ATCATTGCCAAATATGATACCGAAAATCTTCACCCGCGTTTGGCAGCTCTCGATCCGGCGACGCTATCGCAAGTC ACGAAGGGCGATACAGTCAGTATAGCAGTCCCTGAAGGCCCATTCTTGCGAGAACTGGGTCGCCTTTGCGACGAT GATCCGACGGGTATGTTGATGTTCGGAACTTCTGCCAATCTGACAGGCCAAGGACAGCGATTCCGGGTCGAGGAC ATTGAGCCCAAGGTGATCAACGCGGTAGACTTGGTGGTGGATTACGGCCTACAGAAATGGCAAGTGTACAAGCGC GGTGGTATGAATTTCGATGCGGAGAATATGAGGGTGCTGCGGAAGGGAGCCGGATATGAAGTCTTTCGCGACCGG ATGTTGAGATGGTTCCCTCATTTGCTGGAGGAAGCTGGTGTTACTATGGAGGAGGATCCAGAATGTCAAACCAGC GAGCCGAAAACTGCAGGCTATTAG
Gene	>Ani_SJS100_1\|g1926.t1 ATGGCTCCCCGTTTCATACCCGAACAAGGCACTGCGCCTAATGTCCCTCGCGATGCTAAGCAGACCTACGACACT CTAAAAAACGGTGGAGTCGTCATCATCCCAACCGATGTCGGCTATGCACTCTTGACGAGCACGCAGGCTGGAGTC CAGCAGATATTCTCAGCCAAAGATCGCCGAGAGGGTCACAACATCGGTATCATCGGGACATACAAACAGCATTAT GAGATTCACGTGCTCTCGGAGGCCAAATTCGAGATGACACGGGTTCTGACTGAAGATATGGCGATGATTGTCGGG ATCATTGCCAAATATGATACCGAAAATCTTCACCCGCGTTTGGCAGCTCTCGATCCGGCGACGCTATCGCAAGTC ACGAAGGGCGATACAGTCAGTATAGCAGTCCCTGAAGGCCCATTCTTGCGAGAACTGGGTCGCCTTTGCGACGAT GATCCGACGGGTATGTTGATGTTCGGAACTTCTGCCAATCTGACAGGCCAAGGACAGCGATTCCGGGTCGAGGAC ATTGAGCCCAAGGTGATCAACGCGGTAGACTTGGTGGTGGATTACGGCCTACAGAAATGGCAAGTGTACAAGCGC GGTGGTATGAATTTCGATGCGGAGAATATGAGGGTGCTGCGGAAGGGAGCCGGATATGAAGTCTTTCGCGACCGG ATGTTGAGATGGTTCCCTCATTTGCTGGAGGAAGCTGGTGTTACTATGGAGGAGGATCCAGAATGTCAAACCAGC GAGCCGAAAACTGCAGGCTATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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