Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g1921.t1
Gene name
Location	scaffold_007:429058..429907
Strand	-
Gene length (bp)	849
Transcript length (bp)	849
Coding sequence length (bp)	849
Protein length (aa)	283

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	259	281	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g1921.t1 MNYLPYLSWAVLVVNSVIAMGDGTPDVSSGIFEVDLIFPRNETYTPQALMPIVFALQNPSLASPLAATITWGLRE GNNWSAPGSITGGAFELSTLNLPTTGPGFATSIFNTLSYPDGSWTFAWNLQLYNCSVADSASCLLSESVNCSLAY NPDQIIEIYNTVVFTVSQSGQAPSLEAATSSDMCGTMEAYAFNVTSTRAACGFLAPSPTTNPCAATINNSAASSI WATATDFACDPRTHSEYPNVTCPTPSSKSNGARQYGMVAALTLLTLFTMATALIHLG*
Coding	>Ani_SJS100_1\|g1921.t1 ATGAACTACCTTCCATATCTTTCTTGGGCCGTATTGGTGGTAAACTCGGTGATTGCAATGGGCGACGGCACACCA GATGTCTCTTCTGGCATCTTCGAAGTGGACTTGATTTTCCCACGCAATGAAACGTACACCCCTCAGGCGCTGATG CCCATAGTTTTCGCGCTGCAGAATCCGTCCCTGGCTTCCCCTCTGGCAGCTACTATCACCTGGGGGTTGCGAGAA GGCAACAACTGGTCTGCCCCAGGTTCCATCACCGGCGGGGCTTTTGAGCTCTCTACATTGAATCTTCCGACTACT GGGCCTGGATTTGCCACCAGCATCTTCAACACTCTCTCCTACCCGGACGGCTCTTGGACCTTTGCCTGGAACCTA CAACTTTACAATTGCTCCGTAGCTGACAGCGCAAGTTGCTTGTTGTCTGAAAGCGTGAATTGCTCTTTGGCTTAC AACCCAGATCAAATCATCGAAATATACAATACCGTTGTTTTCACAGTCAGCCAGTCAGGGCAGGCACCCAGTCTC GAAGCAGCCACATCTTCCGACATGTGTGGCACCATGGAAGCCTATGCGTTCAACGTGACATCTACCAGGGCAGCC TGCGGCTTCCTTGCGCCCAGTCCGACCACCAACCCGTGCGCGGCGACAATCAACAATTCCGCGGCGTCCAGTATA TGGGCAACAGCCACCGATTTTGCTTGTGACCCTCGAACGCATTCGGAATACCCCAACGTCACCTGTCCGACCCCC TCCTCCAAATCCAACGGCGCGAGACAATATGGAATGGTCGCAGCATTGACATTGCTCACGCTCTTTACCATGGCG ACTGCCTTGATCCACCTTGGGTGA
Transcript	>Ani_SJS100_1\|g1921.t1 ATGAACTACCTTCCATATCTTTCTTGGGCCGTATTGGTGGTAAACTCGGTGATTGCAATGGGCGACGGCACACCA GATGTCTCTTCTGGCATCTTCGAAGTGGACTTGATTTTCCCACGCAATGAAACGTACACCCCTCAGGCGCTGATG CCCATAGTTTTCGCGCTGCAGAATCCGTCCCTGGCTTCCCCTCTGGCAGCTACTATCACCTGGGGGTTGCGAGAA GGCAACAACTGGTCTGCCCCAGGTTCCATCACCGGCGGGGCTTTTGAGCTCTCTACATTGAATCTTCCGACTACT GGGCCTGGATTTGCCACCAGCATCTTCAACACTCTCTCCTACCCGGACGGCTCTTGGACCTTTGCCTGGAACCTA CAACTTTACAATTGCTCCGTAGCTGACAGCGCAAGTTGCTTGTTGTCTGAAAGCGTGAATTGCTCTTTGGCTTAC AACCCAGATCAAATCATCGAAATATACAATACCGTTGTTTTCACAGTCAGCCAGTCAGGGCAGGCACCCAGTCTC GAAGCAGCCACATCTTCCGACATGTGTGGCACCATGGAAGCCTATGCGTTCAACGTGACATCTACCAGGGCAGCC TGCGGCTTCCTTGCGCCCAGTCCGACCACCAACCCGTGCGCGGCGACAATCAACAATTCCGCGGCGTCCAGTATA TGGGCAACAGCCACCGATTTTGCTTGTGACCCTCGAACGCATTCGGAATACCCCAACGTCACCTGTCCGACCCCC TCCTCCAAATCCAACGGCGCGAGACAATATGGAATGGTCGCAGCATTGACATTGCTCACGCTCTTTACCATGGCG ACTGCCTTGATCCACCTTGGGTGA
Gene	>Ani_SJS100_1\|g1921.t1 ATGAACTACCTTCCATATCTTTCTTGGGCCGTATTGGTGGTAAACTCGGTGATTGCAATGGGCGACGGCACACCA GATGTCTCTTCTGGCATCTTCGAAGTGGACTTGATTTTCCCACGCAATGAAACGTACACCCCTCAGGCGCTGATG CCCATAGTTTTCGCGCTGCAGAATCCGTCCCTGGCTTCCCCTCTGGCAGCTACTATCACCTGGGGGTTGCGAGAA GGCAACAACTGGTCTGCCCCAGGTTCCATCACCGGCGGGGCTTTTGAGCTCTCTACATTGAATCTTCCGACTACT GGGCCTGGATTTGCCACCAGCATCTTCAACACTCTCTCCTACCCGGACGGCTCTTGGACCTTTGCCTGGAACCTA CAACTTTACAATTGCTCCGTAGCTGACAGCGCAAGTTGCTTGTTGTCTGAAAGCGTGAATTGCTCTTTGGCTTAC AACCCAGATCAAATCATCGAAATATACAATACCGTTGTTTTCACAGTCAGCCAGTCAGGGCAGGCACCCAGTCTC GAAGCAGCCACATCTTCCGACATGTGTGGCACCATGGAAGCCTATGCGTTCAACGTGACATCTACCAGGGCAGCC TGCGGCTTCCTTGCGCCCAGTCCGACCACCAACCCGTGCGCGGCGACAATCAACAATTCCGCGGCGTCCAGTATA TGGGCAACAGCCACCGATTTTGCTTGTGACCCTCGAACGCATTCGGAATACCCCAACGTCACCTGTCCGACCCCC TCCTCCAAATCCAACGGCGCGAGACAATATGGAATGGTCGCAGCATTGACATTGCTCACGCTCTTTACCATGGCG ACTGCCTTGATCCACCTTGGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail