Protein ID | Ani_SJS100_1|g1918.t1 |
Gene name | |
Location | scaffold_007:419132..420284 |
Strand | - |
Gene length (bp) | 1152 |
Transcript length (bp) | 1152 |
Coding sequence length (bp) | 1152 |
Protein length (aa) | 384 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04666 | Glyco_transf_54 | N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region | 2.4E-10 | 62 | 215 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 234 | 251 | 17 |
2 | 261 | 283 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1918.t1 MLALWYLLSVGYYRSASHRDPTSFFFNPSRAYEKRYSAHRIQEAESFLVRAGDFPSPAKPSGNTQATICVGIVTV RRRKDQYVGLTVASLLEGLTESERSTIFLDILIAHTDPSTLPIFSEKWVEVLPDRVLLYPKEDNPDYEQIREWEE GGWYRNKTIYDFTHLMKDCYDTGADYVAMIEDDTLAAKGWLSSTLHALDVIHQRSIAGQDWVYLRLFYVDNLLGW NSEEWPRYLALSFVIWATLTGAMVFIKRRFFKSTPASAIWMTSLIFIPAFIGLHFIAGRQTMWPIRSGVHEMNKY GCCSQGLVFPRSIVPQFLEHTDLTTDWLVDMMVEKIANKEEWKRYAVVPPVLQHIGATSSKGYGFDKSAKTIWNF RYEEYPYR* |
Coding | >Ani_SJS100_1|g1918.t1 ATGCTCGCTCTTTGGTATCTACTCTCGGTCGGCTATTATCGGTCGGCGAGTCACCGCGATCCTACCTCCTTCTTC TTCAACCCCAGTCGTGCCTACGAGAAACGGTATTCCGCGCATCGAATTCAAGAGGCAGAGTCCTTTCTCGTCAGG GCTGGCGACTTTCCCTCCCCAGCAAAGCCATCTGGCAACACCCAGGCTACGATTTGCGTGGGGATAGTGACGGTT CGCCGAAGAAAAGACCAATATGTTGGGTTGACAGTCGCCTCTCTTCTGGAGGGCTTGACCGAGTCGGAACGAAGC ACTATATTCCTCGATATACTCATTGCACATACCGATCCCTCTACCCTCCCGATCTTCTCAGAGAAATGGGTAGAA GTTCTACCCGACCGCGTCCTCCTGTACCCGAAAGAAGATAATCCCGATTACGAGCAAATCCGCGAATGGGAGGAG GGAGGATGGTATCGCAACAAGACCATCTACGATTTTACACATTTGATGAAGGATTGCTATGATACGGGCGCAGAT TATGTCGCTATGATTGAAGATGATACATTGGCTGCCAAGGGCTGGCTCTCTTCTACGTTGCATGCCCTTGATGTG ATCCACCAGCGCAGCATAGCAGGGCAAGACTGGGTCTATCTTCGTCTATTCTATGTTGATAACCTGCTTGGTTGG AACTCGGAGGAGTGGCCACGTTATCTCGCGTTGTCTTTCGTTATCTGGGCTACTTTAACGGGTGCCATGGTATTC ATAAAAAGGAGGTTCTTCAAGTCAACACCTGCGAGTGCTATCTGGATGACATCTCTCATTTTTATCCCGGCATTC ATCGGACTACACTTCATCGCAGGACGGCAGACAATGTGGCCGATTCGTTCCGGGGTCCACGAGATGAACAAGTAC GGATGCTGCTCGCAGGGCCTGGTCTTCCCACGTTCGATAGTACCGCAATTTCTGGAACATACCGACTTGACAACC GATTGGCTAGTTGATATGATGGTCGAGAAAATTGCCAACAAAGAGGAGTGGAAACGTTACGCGGTAGTTCCACCA GTCCTTCAACATATCGGTGCCACGAGCTCGAAAGGGTATGGATTTGATAAGTCGGCGAAGACAATCTGGAATTTT AGATACGAAGAGTATCCATATAGATAG |
Transcript | >Ani_SJS100_1|g1918.t1 ATGCTCGCTCTTTGGTATCTACTCTCGGTCGGCTATTATCGGTCGGCGAGTCACCGCGATCCTACCTCCTTCTTC TTCAACCCCAGTCGTGCCTACGAGAAACGGTATTCCGCGCATCGAATTCAAGAGGCAGAGTCCTTTCTCGTCAGG GCTGGCGACTTTCCCTCCCCAGCAAAGCCATCTGGCAACACCCAGGCTACGATTTGCGTGGGGATAGTGACGGTT CGCCGAAGAAAAGACCAATATGTTGGGTTGACAGTCGCCTCTCTTCTGGAGGGCTTGACCGAGTCGGAACGAAGC ACTATATTCCTCGATATACTCATTGCACATACCGATCCCTCTACCCTCCCGATCTTCTCAGAGAAATGGGTAGAA GTTCTACCCGACCGCGTCCTCCTGTACCCGAAAGAAGATAATCCCGATTACGAGCAAATCCGCGAATGGGAGGAG GGAGGATGGTATCGCAACAAGACCATCTACGATTTTACACATTTGATGAAGGATTGCTATGATACGGGCGCAGAT TATGTCGCTATGATTGAAGATGATACATTGGCTGCCAAGGGCTGGCTCTCTTCTACGTTGCATGCCCTTGATGTG ATCCACCAGCGCAGCATAGCAGGGCAAGACTGGGTCTATCTTCGTCTATTCTATGTTGATAACCTGCTTGGTTGG AACTCGGAGGAGTGGCCACGTTATCTCGCGTTGTCTTTCGTTATCTGGGCTACTTTAACGGGTGCCATGGTATTC ATAAAAAGGAGGTTCTTCAAGTCAACACCTGCGAGTGCTATCTGGATGACATCTCTCATTTTTATCCCGGCATTC ATCGGACTACACTTCATCGCAGGACGGCAGACAATGTGGCCGATTCGTTCCGGGGTCCACGAGATGAACAAGTAC GGATGCTGCTCGCAGGGCCTGGTCTTCCCACGTTCGATAGTACCGCAATTTCTGGAACATACCGACTTGACAACC GATTGGCTAGTTGATATGATGGTCGAGAAAATTGCCAACAAAGAGGAGTGGAAACGTTACGCGGTAGTTCCACCA GTCCTTCAACATATCGGTGCCACGAGCTCGAAAGGGTATGGATTTGATAAGTCGGCGAAGACAATCTGGAATTTT AGATACGAAGAGTATCCATATAGATAG |
Gene | >Ani_SJS100_1|g1918.t1 ATGCTCGCTCTTTGGTATCTACTCTCGGTCGGCTATTATCGGTCGGCGAGTCACCGCGATCCTACCTCCTTCTTC TTCAACCCCAGTCGTGCCTACGAGAAACGGTATTCCGCGCATCGAATTCAAGAGGCAGAGTCCTTTCTCGTCAGG GCTGGCGACTTTCCCTCCCCAGCAAAGCCATCTGGCAACACCCAGGCTACGATTTGCGTGGGGATAGTGACGGTT CGCCGAAGAAAAGACCAATATGTTGGGTTGACAGTCGCCTCTCTTCTGGAGGGCTTGACCGAGTCGGAACGAAGC ACTATATTCCTCGATATACTCATTGCACATACCGATCCCTCTACCCTCCCGATCTTCTCAGAGAAATGGGTAGAA GTTCTACCCGACCGCGTCCTCCTGTACCCGAAAGAAGATAATCCCGATTACGAGCAAATCCGCGAATGGGAGGAG GGAGGATGGTATCGCAACAAGACCATCTACGATTTTACACATTTGATGAAGGATTGCTATGATACGGGCGCAGAT TATGTCGCTATGATTGAAGATGATACATTGGCTGCCAAGGGCTGGCTCTCTTCTACGTTGCATGCCCTTGATGTG ATCCACCAGCGCAGCATAGCAGGGCAAGACTGGGTCTATCTTCGTCTATTCTATGTTGATAACCTGCTTGGTTGG AACTCGGAGGAGTGGCCACGTTATCTCGCGTTGTCTTTCGTTATCTGGGCTACTTTAACGGGTGCCATGGTATTC ATAAAAAGGAGGTTCTTCAAGTCAACACCTGCGAGTGCTATCTGGATGACATCTCTCATTTTTATCCCGGCATTC ATCGGACTACACTTCATCGCAGGACGGCAGACAATGTGGCCGATTCGTTCCGGGGTCCACGAGATGAACAAGTAC GGATGCTGCTCGCAGGGCCTGGTCTTCCCACGTTCGATAGTACCGCAATTTCTGGAACATACCGACTTGACAACC GATTGGCTAGTTGATATGATGGTCGAGAAAATTGCCAACAAAGAGGAGTGGAAACGTTACGCGGTAGTTCCACCA GTCCTTCAACATATCGGTGCCACGAGCTCGAAAGGGTATGGATTTGATAAGTCGGCGAAGACAATCTGGAATTTT AGATACGAAGAGTATCCATATAGATAG |