© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1874.t1 |
| Gene name | |
| Location | scaffold_007:288228..289447 |
| Strand | - |
| Gene length (bp) | 1219 |
| Transcript length (bp) | 1152 |
| Coding sequence length (bp) | 1152 |
| Protein length (aa) | 384 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.7E-23 | 1 | 316 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 31 | 53 | 22 |
| 2 | 60 | 82 | 22 |
| 3 | 97 | 119 | 22 |
| 4 | 132 | 154 | 22 |
| 5 | 209 | 231 | 22 |
| 6 | 238 | 257 | 19 |
| 7 | 267 | 289 | 22 |
| 8 | 302 | 324 | 22 |
| 9 | 347 | 369 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1874.t1 MSGVAASLCMPSAMSIIAEHFPSGKLRNLAFALMGSGQPIGFGVGLLLGGVFADTVSWRWGFYSAAIANTPVFLL SIWQLPGRNSGQQGISWRNLFFGIDWIGALTASAALALLSYAIAVITDDVSEIHESSTIIFLSLSCALMVFFVLW QGQQEHQSRPTLIKNSLWKDSGFTCICTNVFLIWGEFNAFEQIANFFFQDVQQLSVFSTSVRFVPVTVMGVLTSL VTGMILHRVRADALINWATILSSLSPLLMALIDPAWTYWRSAFIAMCLNPVAADVLFTVSTIIIAGMFPAETQGL AAGVFNTVSQFGRSIGLALVALIANSVTDRYSQSENKDSPEALMVGYRAAFWFLFAMNIASLVASLIGLRRIGNV GRKRSLEI* |
| Coding | >Ani_SJS100_1|g1874.t1 ATGTCTGGTGTAGCAGCTTCACTTTGTATGCCGTCTGCTATGAGTATCATTGCCGAACACTTTCCATCTGGAAAG CTCAGAAATCTTGCCTTTGCTCTGATGGGATCGGGTCAACCCATCGGCTTTGGTGTCGGTCTCCTTCTGGGAGGC GTTTTTGCGGACACTGTGAGCTGGCGCTGGGGCTTTTACAGCGCCGCGATCGCCAATACTCCGGTCTTCCTTCTA TCAATATGGCAATTGCCCGGTAGAAACTCCGGACAACAGGGTATTTCATGGCGTAATCTCTTCTTCGGAATTGAC TGGATTGGAGCCCTGACTGCCAGTGCCGCGCTGGCTCTTCTCTCCTATGCTATAGCTGTCATCACCGATGATGTA TCAGAGATCCACGAATCAAGCACGATTATATTCCTCTCCCTGTCCTGCGCCCTGATGGTCTTCTTTGTCCTCTGG CAAGGCCAACAAGAGCATCAGTCCCGACCCACCCTAATTAAGAACTCCTTGTGGAAGGACTCGGGCTTTACCTGC ATTTGCACCAACGTCTTCCTGATCTGGGGTGAATTCAATGCTTTTGAGCAAATCGCCAACTTCTTCTTCCAGGAC GTGCAGCAGCTCTCGGTATTCAGTACTTCTGTGCGCTTTGTTCCAGTAACTGTCATGGGCGTACTCACCAGCCTG GTCACTGGGATGATATTGCACCGAGTGCGCGCAGATGCCCTGATCAACTGGGCTACTATCCTCTCATCGCTCTCA CCACTACTAATGGCGCTTATTGACCCAGCGTGGACGTATTGGCGCAGTGCGTTCATTGCCATGTGCCTTAACCCC GTTGCGGCTGATGTCCTCTTCACTGTTTCGACCATAATTATTGCTGGCATGTTCCCTGCGGAGACGCAGGGTCTG GCTGCCGGCGTATTCAACACTGTGTCGCAGTTCGGGCGAAGCATTGGATTGGCGTTGGTGGCGTTGATCGCGAAT AGTGTTACTGATAGGTACTCGCAATCAGAGAACAAGGATAGTCCCGAGGCATTGATGGTGGGCTATCGGGCAGCT TTTTGGTTCCTTTTTGCGATGAATATTGCCAGTCTTGTGGCGAGTTTAATCGGGTTGCGGAGGATTGGGAATGTG GGACGGAAAAGGTCTCTGGAAATCTGA |
| Transcript | >Ani_SJS100_1|g1874.t1 ATGTCTGGTGTAGCAGCTTCACTTTGTATGCCGTCTGCTATGAGTATCATTGCCGAACACTTTCCATCTGGAAAG CTCAGAAATCTTGCCTTTGCTCTGATGGGATCGGGTCAACCCATCGGCTTTGGTGTCGGTCTCCTTCTGGGAGGC GTTTTTGCGGACACTGTGAGCTGGCGCTGGGGCTTTTACAGCGCCGCGATCGCCAATACTCCGGTCTTCCTTCTA TCAATATGGCAATTGCCCGGTAGAAACTCCGGACAACAGGGTATTTCATGGCGTAATCTCTTCTTCGGAATTGAC TGGATTGGAGCCCTGACTGCCAGTGCCGCGCTGGCTCTTCTCTCCTATGCTATAGCTGTCATCACCGATGATGTA TCAGAGATCCACGAATCAAGCACGATTATATTCCTCTCCCTGTCCTGCGCCCTGATGGTCTTCTTTGTCCTCTGG CAAGGCCAACAAGAGCATCAGTCCCGACCCACCCTAATTAAGAACTCCTTGTGGAAGGACTCGGGCTTTACCTGC ATTTGCACCAACGTCTTCCTGATCTGGGGTGAATTCAATGCTTTTGAGCAAATCGCCAACTTCTTCTTCCAGGAC GTGCAGCAGCTCTCGGTATTCAGTACTTCTGTGCGCTTTGTTCCAGTAACTGTCATGGGCGTACTCACCAGCCTG GTCACTGGGATGATATTGCACCGAGTGCGCGCAGATGCCCTGATCAACTGGGCTACTATCCTCTCATCGCTCTCA CCACTACTAATGGCGCTTATTGACCCAGCGTGGACGTATTGGCGCAGTGCGTTCATTGCCATGTGCCTTAACCCC GTTGCGGCTGATGTCCTCTTCACTGTTTCGACCATAATTATTGCTGGCATGTTCCCTGCGGAGACGCAGGGTCTG GCTGCCGGCGTATTCAACACTGTGTCGCAGTTCGGGCGAAGCATTGGATTGGCGTTGGTGGCGTTGATCGCGAAT AGTGTTACTGATAGGTACTCGCAATCAGAGAACAAGGATAGTCCCGAGGCATTGATGGTGGGCTATCGGGCAGCT TTTTGGTTCCTTTTTGCGATGAATATTGCCAGTCTTGTGGCGAGTTTAATCGGGTTGCGGAGGATTGGGAATGTG GGACGGAAAAGGTCTCTGGAAATCTGA |
| Gene | >Ani_SJS100_1|g1874.t1 ATGTCTGGTGTAGCAGCTTCACTTTGTATGCCGTCTGCTATGAGTATCATTGCCGAACACTTTCCATCTGGAAAG CTCAGAAATCTTGCCTTTGCTCTGATGGGATCGGGTCAACCCATCGGCTTTGGTGTCGGTCTCCTTCTGGGAGGC GTTTTTGCGGACACTGTGAGCTGGCGCTGGGGCTTTTACAGCGCCGCGATCGCCAATACTCCGGTCTTCCTTCTA TCAATATGGCAATTGCCCGGTAGAAACTCCGGACAACAGGGTATTTCATGGCGTAATCTCTTCTTCGGAATTGAC TGGATTGGAGCCCTGACTGCCAGTGCCGCGCTGGCTCTTCTCTCCTATGCTATAGCGTGCGTATATAAGACCTAG TTCGAGTTGAGCTGAAAGATCACTGACTTGCTTTTCTCTCCGTGTTAGTGTCATCACCGATGATGTATCAGAGAT CCACGAATCAAGCACGATTATATTCCTCTCCCTGTCCTGCGCCCTGATGGTCTTCTTTGTCCTCTGGCAAGGCCA ACAAGAGCATCAGTCCCGACCCACCCTAATTAAGAACTCCTTGTGGAAGGACTCGGGCTTTACCTGCATTTGCAC CAACGTCTTCCTGATCTGGGGTGAATTCAATGCTTTTGAGCAAATCGCCAACTTCTTCTTCCAGGACGTGCAGCA GCTCTCGGTATTCAGTACTTCTGTGCGCTTTGTTCCAGTAACTGTCATGGGCGTACTCACCAGCCTGGTCACTGG GATGATATTGCACCGAGTGCGCGCAGATGCCCTGATCAACTGGGCTACTATCCTCTCATCGCTCTCACCACTACT AATGGCGCTTATTGACCCAGCGTGGACGTATTGGCGCAGTGCGTTCATTGCCATGTGCCTTAACCCCGTTGCGGC TGATGTCCTCTTCACTGTTTCGACCATAATTATTGCTGGCATGTTCCCTGCGGAGACGCAGGGTCTGGCTGCCGG CGTATTCAACACTGTGTCGCAGTTCGGGCGAAGCATTGGATTGGCGTTGGTGGCGTTGATCGCGAATAGTGTTAC TGATAGGTACTCGCAATCAGAGAACAAGGATAGTCCCGAGGCATTGATGGTGGGCTATCGGGCAGCTTTTTGGTT CCTTTTTGCGATGAATATTGCCAGTCTTGTGGCGAGTTTAATCGGGTTGCGGAGGATTGGGAATGTGGGACGGAA AAGGTCTCTGGAAATCTGA |