© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g176.t1 |
| Gene name | |
| Location | scaffold_001:593414..593993 |
| Strand | - |
| Gene length (bp) | 579 |
| Transcript length (bp) | 579 |
| Coding sequence length (bp) | 579 |
| Protein length (aa) | 193 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12296 | HsbA | Hydrophobic surface binding protein A | 3.3E-26 | 36 | 162 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 24 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g176.t1 MKMNISYLLTLLFTAAVAVATATPSKVLLPFKRDASSVVSAVNTISTQLVTLNTTVSSYPGGIEGTLSALQIQAE TIQLEVDLKTAIRLTRQYANFTDTESQKVAEAFVTLEPQIASTLANIVSKKSDFDDGLLGIASLSFLVKFDLQEL SILSKALGSAVQDKLSGTYADLAPLILNEISAAFKKAIAAYS* |
| Coding | >Ani_SJS100_1|g176.t1 ATGAAAATGAACATCTCCTACCTCCTTACATTGCTTTTCACTGCCGCGGTAGCAGTAGCAACTGCAACACCGTCC AAAGTCCTACTCCCTTTCAAACGAGATGCTTCTAGCGTTGTTTCCGCCGTGAACACCATCTCCACCCAGCTGGTT ACCCTGAACACCACCGTGAGCAGCTACCCGGGCGGCATTGAAGGAACATTATCCGCCCTGCAGATTCAAGCGGAA ACCATCCAGCTCGAAGTCGACCTTAAAACTGCAATCAGATTGACGCGACAGTATGCCAATTTCACCGACACCGAG TCGCAGAAGGTAGCGGAAGCTTTCGTCACGTTAGAGCCCCAGATCGCGTCTACACTGGCCAACATTGTGTCGAAA AAGTCGGATTTTGACGATGGATTGTTGGGCATCGCATCATTGAGTTTCCTTGTCAAGTTCGATCTGCAGGAGTTG AGCATTTTGTCGAAGGCGCTGGGGTCAGCCGTGCAGGACAAGTTGTCAGGGACGTATGCAGATTTGGCACCGCTA ATCCTGAATGAGATCTCCGCTGCATTTAAGAAGGCCATTGCGGCTTACTCATAG |
| Transcript | >Ani_SJS100_1|g176.t1 ATGAAAATGAACATCTCCTACCTCCTTACATTGCTTTTCACTGCCGCGGTAGCAGTAGCAACTGCAACACCGTCC AAAGTCCTACTCCCTTTCAAACGAGATGCTTCTAGCGTTGTTTCCGCCGTGAACACCATCTCCACCCAGCTGGTT ACCCTGAACACCACCGTGAGCAGCTACCCGGGCGGCATTGAAGGAACATTATCCGCCCTGCAGATTCAAGCGGAA ACCATCCAGCTCGAAGTCGACCTTAAAACTGCAATCAGATTGACGCGACAGTATGCCAATTTCACCGACACCGAG TCGCAGAAGGTAGCGGAAGCTTTCGTCACGTTAGAGCCCCAGATCGCGTCTACACTGGCCAACATTGTGTCGAAA AAGTCGGATTTTGACGATGGATTGTTGGGCATCGCATCATTGAGTTTCCTTGTCAAGTTCGATCTGCAGGAGTTG AGCATTTTGTCGAAGGCGCTGGGGTCAGCCGTGCAGGACAAGTTGTCAGGGACGTATGCAGATTTGGCACCGCTA ATCCTGAATGAGATCTCCGCTGCATTTAAGAAGGCCATTGCGGCTTACTCATAG |
| Gene | >Ani_SJS100_1|g176.t1 ATGAAAATGAACATCTCCTACCTCCTTACATTGCTTTTCACTGCCGCGGTAGCAGTAGCAACTGCAACACCGTCC AAAGTCCTACTCCCTTTCAAACGAGATGCTTCTAGCGTTGTTTCCGCCGTGAACACCATCTCCACCCAGCTGGTT ACCCTGAACACCACCGTGAGCAGCTACCCGGGCGGCATTGAAGGAACATTATCCGCCCTGCAGATTCAAGCGGAA ACCATCCAGCTCGAAGTCGACCTTAAAACTGCAATCAGATTGACGCGACAGTATGCCAATTTCACCGACACCGAG TCGCAGAAGGTAGCGGAAGCTTTCGTCACGTTAGAGCCCCAGATCGCGTCTACACTGGCCAACATTGTGTCGAAA AAGTCGGATTTTGACGATGGATTGTTGGGCATCGCATCATTGAGTTTCCTTGTCAAGTTCGATCTGCAGGAGTTG AGCATTTTGTCGAAGGCGCTGGGGTCAGCCGTGCAGGACAAGTTGTCAGGGACGTATGCAGATTTGGCACCGCTA ATCCTGAATGAGATCTCCGCTGCATTTAAGAAGGCCATTGCGGCTTACTCATAG |