Protein ID | Ani_SJS100_1|g1758.t1 |
Gene name | |
Location | scaffold_006:578188..580368 |
Strand | - |
Gene length (bp) | 2180 |
Transcript length (bp) | 2106 |
Coding sequence length (bp) | 2106 |
Protein length (aa) | 702 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08144 | CPL | CPL (NUC119) domain | 8.5E-28 | 480 | 610 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003723 | RNA binding | Yes |
GO:0003676 | nucleic acid binding | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 67 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1758.t1 MVGVKRRVDAGDERNGKRTKTKTPVSVPAKKSKSTAAPVKASKSVSKKGDKGGKKDKKTPSKKKAQKEESESEDD DDEDDFDLDDVDDSEIDALDDEDDEEDVAMDDVEEVEEKEDTGKKPKSADADAQQNKSTSRESHAKQKALLQERR AARPNADMIGRSKKLWEQLRRKSHVPLEERKKLIKELFEIITGRVKDFVFKHDSVRVIQTALKYANMEQRKMIAT ELKGSYNELAQSRYAKFLVGKLIVHGDAEVRDLIVPEFYGHVKRLIRHPEGSWILDDIYRTVATKEQKANLLREW YGPEFVIFRDDKNGPPSADLSKILEAHPEKRGPIMHYLWELVNQLVQKRNSGFTILHDAMLQYYLNTKPGSSEAN EFVELLKGDEEGDLVKNLAFTKSGARVMSLSLAYSNAKDRKLLTRFYRDTIKMMAGDLHGHLVLLTAYEVIDDTK LTSKLIFPELLNQGMDAEARNEELLFQVNDLTARIPILYPFVGDRVKWLLPDGDHELLKEIRDIRKETSKKDPEL RRQELVKAASASVLELISARADSLLETSFGCQFISEVLFEADGDKSAALAAVAEAAKSRADTKDSPFVGRLLKSL VQGGRFNAAEKKVEKVQPPLNFHGLLYEQIQEETMSWATGSNVFVVVALAESDDFEKKAELLKTLKKNKKALEKA SSETSKDGKKGSPVSSGAKLLLEKIR* |
Coding | >Ani_SJS100_1|g1758.t1 ATGGTCGGGGTTAAGCGTCGAGTAGACGCCGGTGACGAGCGCAATGGAAAACGGACCAAGACGAAGACGCCGGTG TCCGTGCCCGCGAAGAAGTCCAAGTCGACTGCGGCTCCCGTGAAGGCATCCAAGTCTGTGTCGAAGAAGGGCGAC AAGGGTGGAAAGAAGGATAAGAAGACTCCCAGCAAGAAGAAGGCGCAGAAGGAGGAATCTGAGTCTGAGGATGAT GATGATGAGGATGACTTTGACTTGGATGATGTTGATGATTCGGAAATTGATGCTCTGGATGATGAGGATGACGAG GAGGATGTTGCTATGGATGATGTTGAGGAGGTCGAGGAGAAGGAAGATACTGGGAAGAAGCCCAAGTCTGCGGAT GCAGATGCTCAGCAAAATAAGTCTACGTCGCGCGAATCGCATGCGAAGCAAAAGGCCCTCCTGCAAGAGCGCAGG GCCGCCAGACCCAACGCTGATATGATCGGTCGCTCGAAGAAGCTGTGGGAGCAGCTGCGTCGCAAGTCCCATGTT CCGCTCGAGGAGCGGAAGAAGCTCATCAAGGAACTTTTTGAAATCATTACTGGACGTGTGAAGGACTTCGTTTTC AAGCATGACTCGGTCCGTGTCATCCAGACGGCCCTCAAATACGCCAACATGGAGCAACGGAAGATGATCGCCACG GAACTGAAGGGCAGCTACAATGAGCTTGCGCAGAGCCGATATGCCAAGTTCCTGGTCGGAAAGTTGATTGTTCAC GGTGATGCTGAGGTTCGTGATTTGATCGTGCCCGAGTTCTACGGACATGTCAAGAGACTCATCAGACACCCCGAG GGGTCTTGGATTCTCGACGATATCTACCGCACGGTTGCGACGAAGGAACAGAAGGCGAACCTCCTCCGTGAGTGG TATGGCCCGGAATTCGTCATCTTTAGGGATGACAAGAACGGCCCCCCCAGTGCAGACCTCTCTAAGATCCTTGAG GCGCACCCGGAGAAGAGGGGCCCCATCATGCACTACCTCTGGGAGCTTGTCAACCAGCTGGTGCAGAAGCGCAAC TCTGGTTTCACCATCCTGCACGACGCCATGCTGCAGTACTACCTTAACACTAAGCCGGGCAGCTCCGAGGCTAAT GAGTTCGTTGAGCTGCTGAAGGGTGATGAAGAGGGAGACCTGGTGAAGAACTTGGCTTTTACCAAGTCTGGTGCA CGGGTGATGTCGTTGAGTCTGGCGTACTCCAACGCCAAGGACCGCAAGCTCCTTACCCGCTTCTACAGAGATACC ATCAAGATGATGGCCGGCGATCTCCACGGACATCTGGTTCTGTTGACGGCATATGAAGTTATTGACGATACCAAG CTTACCTCGAAGTTGATCTTCCCCGAACTTCTGAACCAGGGAATGGACGCCGAGGCACGGAACGAAGAGCTGCTT TTCCAAGTGAACGACTTGACAGCGCGTATCCCCATCCTGTATCCGTTTGTCGGCGACCGGGTCAAGTGGCTTCTG CCTGACGGCGACCATGAGTTGCTGAAGGAGATTCGTGACATTCGTAAGGAGACCTCCAAGAAGGATCCCGAGCTT CGACGACAGGAGCTGGTCAAGGCTGCGTCGGCGAGCGTGCTCGAGCTTATTTCCGCACGTGCCGACTCTCTCCTC GAGACGAGCTTTGGATGCCAATTCATCTCCGAGGTGTTGTTCGAAGCCGATGGAGACAAGAGCGCCGCATTGGCC GCCGTGGCTGAGGCCGCCAAATCCAGAGCCGACACCAAGGACTCTCCGTTCGTGGGTCGGTTGCTCAAGTCACTG GTTCAGGGTGGACGGTTTAACGCTGCCGAGAAGAAGGTCGAGAAGGTGCAGCCTCCGCTCAACTTCCACGGTCTC CTTTACGAGCAGATCCAAGAAGAGACCATGTCGTGGGCCACGGGATCCAATGTGTTTGTCGTGGTGGCTCTTGCG GAGTCGGACGACTTCGAGAAGAAGGCCGAGTTGCTGAAGACGCTGAAGAAGAACAAGAAGGCGCTGGAGAAGGCG TCGTCGGAGACTAGCAAGGATGGCAAGAAGGGCAGCCCAGTCAGCAGTGGTGCGAAGCTGCTGCTGGAGAAGATC CGGTAG |
Transcript | >Ani_SJS100_1|g1758.t1 ATGGTCGGGGTTAAGCGTCGAGTAGACGCCGGTGACGAGCGCAATGGAAAACGGACCAAGACGAAGACGCCGGTG TCCGTGCCCGCGAAGAAGTCCAAGTCGACTGCGGCTCCCGTGAAGGCATCCAAGTCTGTGTCGAAGAAGGGCGAC AAGGGTGGAAAGAAGGATAAGAAGACTCCCAGCAAGAAGAAGGCGCAGAAGGAGGAATCTGAGTCTGAGGATGAT GATGATGAGGATGACTTTGACTTGGATGATGTTGATGATTCGGAAATTGATGCTCTGGATGATGAGGATGACGAG GAGGATGTTGCTATGGATGATGTTGAGGAGGTCGAGGAGAAGGAAGATACTGGGAAGAAGCCCAAGTCTGCGGAT GCAGATGCTCAGCAAAATAAGTCTACGTCGCGCGAATCGCATGCGAAGCAAAAGGCCCTCCTGCAAGAGCGCAGG GCCGCCAGACCCAACGCTGATATGATCGGTCGCTCGAAGAAGCTGTGGGAGCAGCTGCGTCGCAAGTCCCATGTT CCGCTCGAGGAGCGGAAGAAGCTCATCAAGGAACTTTTTGAAATCATTACTGGACGTGTGAAGGACTTCGTTTTC AAGCATGACTCGGTCCGTGTCATCCAGACGGCCCTCAAATACGCCAACATGGAGCAACGGAAGATGATCGCCACG GAACTGAAGGGCAGCTACAATGAGCTTGCGCAGAGCCGATATGCCAAGTTCCTGGTCGGAAAGTTGATTGTTCAC GGTGATGCTGAGGTTCGTGATTTGATCGTGCCCGAGTTCTACGGACATGTCAAGAGACTCATCAGACACCCCGAG GGGTCTTGGATTCTCGACGATATCTACCGCACGGTTGCGACGAAGGAACAGAAGGCGAACCTCCTCCGTGAGTGG TATGGCCCGGAATTCGTCATCTTTAGGGATGACAAGAACGGCCCCCCCAGTGCAGACCTCTCTAAGATCCTTGAG GCGCACCCGGAGAAGAGGGGCCCCATCATGCACTACCTCTGGGAGCTTGTCAACCAGCTGGTGCAGAAGCGCAAC TCTGGTTTCACCATCCTGCACGACGCCATGCTGCAGTACTACCTTAACACTAAGCCGGGCAGCTCCGAGGCTAAT GAGTTCGTTGAGCTGCTGAAGGGTGATGAAGAGGGAGACCTGGTGAAGAACTTGGCTTTTACCAAGTCTGGTGCA CGGGTGATGTCGTTGAGTCTGGCGTACTCCAACGCCAAGGACCGCAAGCTCCTTACCCGCTTCTACAGAGATACC ATCAAGATGATGGCCGGCGATCTCCACGGACATCTGGTTCTGTTGACGGCATATGAAGTTATTGACGATACCAAG CTTACCTCGAAGTTGATCTTCCCCGAACTTCTGAACCAGGGAATGGACGCCGAGGCACGGAACGAAGAGCTGCTT TTCCAAGTGAACGACTTGACAGCGCGTATCCCCATCCTGTATCCGTTTGTCGGCGACCGGGTCAAGTGGCTTCTG CCTGACGGCGACCATGAGTTGCTGAAGGAGATTCGTGACATTCGTAAGGAGACCTCCAAGAAGGATCCCGAGCTT CGACGACAGGAGCTGGTCAAGGCTGCGTCGGCGAGCGTGCTCGAGCTTATTTCCGCACGTGCCGACTCTCTCCTC GAGACGAGCTTTGGATGCCAATTCATCTCCGAGGTGTTGTTCGAAGCCGATGGAGACAAGAGCGCCGCATTGGCC GCCGTGGCTGAGGCCGCCAAATCCAGAGCCGACACCAAGGACTCTCCGTTCGTGGGTCGGTTGCTCAAGTCACTG GTTCAGGGTGGACGGTTTAACGCTGCCGAGAAGAAGGTCGAGAAGGTGCAGCCTCCGCTCAACTTCCACGGTCTC CTTTACGAGCAGATCCAAGAAGAGACCATGTCGTGGGCCACGGGATCCAATGTGTTTGTCGTGGTGGCTCTTGCG GAGTCGGACGACTTCGAGAAGAAGGCCGAGTTGCTGAAGACGCTGAAGAAGAACAAGAAGGCGCTGGAGAAGGCG TCGTCGGAGACTAGCAAGGATGGCAAGAAGGGCAGCCCAGTCAGCAGTGGTGCGAAGCTGCTGCTGGAGAAGATC CGGTAG |
Gene | >Ani_SJS100_1|g1758.t1 ATGGTCGGGGTTAAGCGTCGAGTAGACGCCGGTGACGAGCGCAATGGAAAACGGACCAAGACGAAGACGCCGGTG TCCGTGCCCGCGAAGAAGTCCAAGTCGACTGCGGCTCCCGTGAAGGCATCCAAGTCTGTGTCGAAGAAGGGCGAC AAGGGTGGAAAGAAGGATAAGAAGACTCCCAGCAAGAAGAAGGCGCAGAAGGAGGAATCTGAGTCTGAGGATGAT GATGATGAGGATGACTTTGACTTGGATGATGTTGATGATTCGGAAATTGATGCTCTGGATGATGAGGATGACGAG GAGGATGTTGCTATGGATGATGTTGAGGAGGTCGAGGAGAAGGAAGATACTGGGAAGAAGCCCAAGTCTGCGGAT GCAGATGCTCAGCAAAGTATGATTGATTTATTGATTGATTTTTCCCTCGGTGAAAAGTCTGGTACTAATGTGTTG CTTTTGATTATTTAGATAAGTCTACGTCGCGCGAATCGCATGCGAAGCAAAAGGCCCTCCTGCAAGAGCGCAGGG CCGCCAGACCCAACGCTGATATGATCGGTCGCTCGAAGAAGCTGTGGGAGCAGCTGCGTCGCAAGTCCCATGTTC CGCTCGAGGAGCGGAAGAAGCTCATCAAGGAACTTTTTGAAATCATTACTGGACGTGTGAAGGACTTCGTTTTCA AGCATGACTCGGTCCGTGTCATCCAGACGGCCCTCAAATACGCCAACATGGAGCAACGGAAGATGATCGCCACGG AACTGAAGGGCAGCTACAATGAGCTTGCGCAGAGCCGATATGCCAAGTTCCTGGTCGGAAAGTTGATTGTTCACG GTGATGCTGAGGTTCGTGATTTGATCGTGCCCGAGTTCTACGGACATGTCAAGAGACTCATCAGACACCCCGAGG GGTCTTGGATTCTCGACGATATCTACCGCACGGTTGCGACGAAGGAACAGAAGGCGAACCTCCTCCGTGAGTGGT ATGGCCCGGAATTCGTCATCTTTAGGGATGACAAGAACGGCCCCCCCAGTGCAGACCTCTCTAAGATCCTTGAGG CGCACCCGGAGAAGAGGGGCCCCATCATGCACTACCTCTGGGAGCTTGTCAACCAGCTGGTGCAGAAGCGCAACT CTGGTTTCACCATCCTGCACGACGCCATGCTGCAGTACTACCTTAACACTAAGCCGGGCAGCTCCGAGGCTAATG AGTTCGTTGAGCTGCTGAAGGGTGATGAAGAGGGAGACCTGGTGAAGAACTTGGCTTTTACCAAGTCTGGTGCAC GGGTGATGTCGTTGAGTCTGGCGTACTCCAACGCCAAGGACCGCAAGCTCCTTACCCGCTTCTACAGAGATACCA TCAAGATGATGGCCGGCGATCTCCACGGACATCTGGTTCTGTTGACGGCATATGAAGTTATTGACGATACCAAGC TTACCTCGAAGTTGATCTTCCCCGAACTTCTGAACCAGGGAATGGACGCCGAGGCACGGAACGAAGAGCTGCTTT TCCAAGTGAACGACTTGACAGCGCGTATCCCCATCCTGTATCCGTTTGTCGGCGACCGGGTCAAGTGGCTTCTGC CTGACGGCGACCATGAGTTGCTGAAGGAGATTCGTGACATTCGTAAGGAGACCTCCAAGAAGGATCCCGAGCTTC GACGACAGGAGCTGGTCAAGGCTGCGTCGGCGAGCGTGCTCGAGCTTATTTCCGCACGTGCCGACTCTCTCCTCG AGACGAGCTTTGGATGCCAATTCATCTCCGAGGTGTTGTTCGAAGCCGATGGAGACAAGAGCGCCGCATTGGCCG CCGTGGCTGAGGCCGCCAAATCCAGAGCCGACACCAAGGACTCTCCGTTCGTGGGTCGGTTGCTCAAGTCACTGG TTCAGGGTGGACGGTTTAACGCTGCCGAGAAGAAGGTCGAGAAGGTGCAGCCTCCGCTCAACTTCCACGGTCTCC TTTACGAGCAGATCCAAGAAGAGACCATGTCGTGGGCCACGGGATCCAATGTGTTTGTCGTGGTGGCTCTTGCGG AGTCGGACGACTTCGAGAAGAAGGCCGAGTTGCTGAAGACGCTGAAGAAGAACAAGAAGGCGCTGGAGAAGGCGT CGTCGGAGACTAGCAAGGATGGCAAGAAGGGCAGCCCAGTCAGCAGTGGTGCGAAGCTGCTGCTGGAGAAGATCC GGTAG |