Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g1752.t1
Gene name
Location	scaffold_006:558913..559745
Strand	+
Gene length (bp)	832
Transcript length (bp)	684
Coding sequence length (bp)	684
Protein length (aa)	228

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12352	V-SNARE_C	Snare region anchored in the vesicle membrane C-terminus	5.6E-14	140	202

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	209	226	17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g1752.t1 MATSTGTGWAQLRQQARSLETQTENLFHTYSQYASLTKLPPTPSEEEQRIESQLKDLLERRDSLISQLARLLDSE ATLTSSALKQNNLARHREVLHDHRRELQRLKSAIAESRDRANLLSNVRSDIDAYRNSNPGQAEADYMLEERGRID ESHNMIDGVLSQAYAINENFGLQRETLASINRRIVGAANSVPGMNALIGKIGSKRRRDALILGAFIGFCFLMLLW LR*
Coding	>Ani_SJS100_1\|g1752.t1 ATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGACCGAGAAC CTCTTCCACACATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGAGGAAGAACAGCGGATC GAATCGCAGCTCAAAGACCTCCTAGAACGACGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTCCGAA GCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGT GAACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTCCGAT ATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCGGAAGCAGATTACATGCTTGAGGAGCGGGGTCGGATTGAT GAGAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTTGGTCTGCAGCGTGAG ACGCTCGCTAGTATTAATCGACGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCATGAATGCGTTGATTGGGAAG ATCGGGTCCAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCTTTGG TTGAGGTGA
Transcript	>Ani_SJS100_1\|g1752.t1 ATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGACCGAGAAC CTCTTCCACACATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGAGGAAGAACAGCGGATC GAATCGCAGCTCAAAGACCTCCTAGAACGACGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTCCGAA GCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGT GAACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTCCGAT ATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCGGAAGCAGATTACATGCTTGAGGAGCGGGGTCGGATTGAT GAGAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTTGGTCTGCAGCGTGAG ACGCTCGCTAGTATTAATCGACGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCATGAATGCGTTGATTGGGAAG ATCGGGTCCAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCTTTGG TTGAGGTGA
Gene	>Ani_SJS100_1\|g1752.t1 ATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGGTACGAGCA TCGCTTCCCTGTCATACGGAATGGAAATCCTAACAATGTGTATACATGATCATAGACCGAGAACCTCTTCCACAC ATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGAGGAAGAACAGCGGATCGAATCGCAGCT CAAAGACCTCCTAGAACGAGTACGCATCCACTATGCCCATTCCATCACAGTTACCATCCTAATACCACAATCACA TGAACTAATCTAATGGATCAATCACCAGCGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTCCGAAGC AACCCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGA ACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTCCGATAT CGATGCCTACCGCAACTCGAACCCGGGTCAGGCGGAAGCAGATTACATGCTTGAGGAGCGGGGTCGGATTGATGA GAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTTGGTCTGCAGCGTGAGAC GCTCGCTAGTATTAATCGACGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCATGAATGCGTTGATTGGGAAGAT CGGGTCCAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCTTTGGTT GAGGTGA

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