© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g171.t1 |
| Gene name | |
| Location | scaffold_001:571955..574870 |
| Strand | - |
| Gene length (bp) | 2915 |
| Transcript length (bp) | 2778 |
| Coding sequence length (bp) | 2778 |
| Protein length (aa) | 926 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13424 | TPR_12 | Tetratricopeptide repeat | 1.7E-16 | 771 | 844 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 7.6E-09 | 858 | 924 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 1.5E-03 | 728 | 759 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 2.0E-07 | 771 | 807 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 3.4E-05 | 813 | 848 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 6.7E-05 | 860 | 894 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 1.3E-04 | 774 | 803 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 2.1E-05 | 816 | 849 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 3.3E-02 | 859 | 884 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 7.2E-03 | 728 | 755 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 1.0E-01 | 772 | 798 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 1.1E-02 | 815 | 840 |
| PF00931 | NB-ARC | NB-ARC domain | 4.4E-15 | 330 | 574 |
| PF17874 | TPR_MalT | MalT-like TPR region | 2.9E-13 | 703 | 887 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0043531 | ADP binding | Yes |
| GO:0005515 | protein binding | Yes |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043167 | ion binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g171.t1 MAAAEAMLDEVHPVPPVDKSDQNTYIVGAIHEHNVVIASLPFGVYGTISAAVVASQLRASFPSVRIRLMVRIGGG VPVSDNSSTEDDIRLGDVVVSKPSGTSGGVIQYDFGKTGREGRFHRISCLNKPPQILLTAIAKLEAGHIGHESRI SDILADLQSRQPGVAAKFRYPGPQCDQLFPAEYEHFEESSTCERCDQSKLIARQDRASTHPKIHYGLIASGNQVM KHGITRDRLAGELDVKCFEMEAAGLMDHFPCLVVRGICDYCDSHKNKRWQPYAAATAAAYAKELLSVIPGAPKSD EGRNEPFRVPFDLTGIPVMNGFLGRRGDLLRLWNCLQPGKRNQQKVVVIQGLGGMGKTQLAVEFARRHKNDFTAV LWVNGQSRETVLHSMVSILSRLPGIQGFKDEFAEESIEEKASHTLRWLSMNENSKWLLVFDNVDHDGENICDSFP PADHGSILITTRHAKLARLGNYQQIRRLPTEEAMQLLVNCSGYEIAREKSAPTVNNEAKDLVNRLGCLPLAIVMA GSYIHGTGISFRNYLRHYEQSWKRMQQTTTAHLEYSNGNLLTTWKISYDEVRKRNAAAANLLLLLSYFDNQDVWF QLIRSGNIAICSIIPQWFQSIVSDETSFLANVNLLISFSLVESNPQCSSYSVHPVVHDWCHYELLGELNQPTRMQ LRMTALATIGHAVPSVAEKQHWVLQQRVLPHANRMLACLSKSPSIPQEPALIQALHNLGLLYKSQRKPNEAKQMY QLALTRLETSAGLNYPLASRLQIINNLANLYRNQKEFHQAESLYQRALAGFEETHGPRSESILAILGNLGNLYSD QRKFAEAEEVYRRALMGFENALGHSSSSTLKIVLNLGTLYTDQGKWKEAKQMFRRAVNSLHRTLDFNDPATLTVV VNIGDLCIKSGKSRKAKRIYEDALL* |
| Coding | >Ani_SJS100_1|g171.t1 ATGGCCGCGGCGGAAGCGATGCTGGATGAGGTGCATCCTGTCCCACCTGTTGACAAATCCGATCAAAACACTTAC ATAGTGGGGGCAATTCACGAACACAACGTTGTTATCGCCTCCCTACCCTTCGGAGTATATGGTACCATATCCGCA GCGGTTGTCGCGAGCCAACTCCGCGCCTCCTTCCCGTCTGTCCGAATTAGGTTAATGGTCAGAATTGGTGGAGGG GTGCCTGTATCCGACAATTCTTCAACGGAAGATGATATTCGGCTGGGGGATGTGGTCGTCAGCAAACCGTCGGGG ACCTCAGGCGGAGTGATCCAGTACGACTTTGGTAAAACCGGTCGAGAAGGCCGGTTTCACCGAATCTCGTGCCTC AATAAACCTCCTCAGATATTGTTGACTGCCATAGCAAAATTGGAAGCCGGTCATATAGGACATGAAAGCAGAATT TCGGATATCCTAGCCGATTTGCAGTCGAGGCAACCTGGTGTAGCTGCCAAGTTCAGATATCCTGGTCCGCAATGC GACCAACTTTTCCCTGCAGAGTATGAGCATTTCGAAGAGAGCAGTACGTGTGAGAGATGCGATCAAAGCAAACTC ATTGCTCGACAGGACCGAGCTTCAACACATCCTAAGATTCACTACGGGTTGATTGCCTCAGGAAATCAGGTGATG AAACACGGAATAACGCGAGATCGCCTGGCAGGAGAATTGGATGTCAAATGCTTCGAAATGGAAGCCGCCGGGTTG ATGGATCATTTCCCCTGTCTAGTGGTTCGTGGGATATGCGACTATTGCGATTCGCACAAGAACAAGAGATGGCAG CCATACGCCGCGGCTACCGCCGCGGCCTATGCGAAGGAGCTTCTCTCAGTGATCCCGGGCGCTCCCAAGTCTGAC GAAGGTAGAAACGAGCCGTTTCGGGTTCCATTTGACTTGACAGGCATCCCAGTCATGAATGGATTTCTTGGTCGT CGGGGAGACTTACTCCGGTTATGGAATTGTTTACAGCCGGGAAAACGAAACCAGCAAAAGGTAGTGGTCATTCAA GGACTTGGGGGGATGGGAAAGACACAGCTGGCCGTTGAATTTGCCCGACGTCACAAGAACGACTTTACAGCCGTT CTTTGGGTCAATGGGCAGAGCAGAGAAACGGTTCTTCATTCAATGGTATCGATTTTGTCGAGGCTGCCTGGTATA CAAGGATTCAAAGATGAATTTGCGGAGGAAAGCATTGAGGAAAAGGCCAGCCATACTCTCCGCTGGCTTAGCATG AATGAAAATTCCAAGTGGCTACTTGTGTTTGACAATGTCGATCATGACGGTGAAAATATTTGCGACTCCTTCCCA CCGGCTGATCATGGATCAATTTTGATCACTACCCGCCATGCGAAGCTGGCACGACTTGGTAATTACCAGCAGATT AGGCGACTTCCCACTGAAGAAGCGATGCAGCTTCTGGTGAACTGCTCGGGATATGAGATTGCACGTGAGAAATCT GCCCCAACAGTCAACAACGAAGCAAAAGACCTCGTCAATCGACTGGGGTGCCTACCCCTTGCTATCGTAATGGCC GGCTCCTACATTCACGGTACCGGAATAAGCTTCCGGAATTACCTGCGCCATTATGAACAGTCGTGGAAAAGAATG CAACAGACGACCACAGCCCACCTCGAATACTCGAACGGGAACCTCTTGACAACATGGAAGATTTCCTACGACGAA GTACGCAAAAGAAATGCAGCGGCTGCGAACTTACTGCTGCTTCTTTCTTACTTCGATAATCAAGACGTCTGGTTC CAGCTAATAAGGAGTGGAAATATTGCAATTTGCAGTATAATCCCCCAGTGGTTCCAAAGTATAGTTTCAGATGAA ACAAGCTTTCTCGCCAACGTCAATTTGCTGATTTCATTTTCTTTGGTGGAGTCAAATCCACAATGTTCCAGCTAC TCCGTGCACCCCGTGGTTCACGACTGGTGTCACTACGAACTACTGGGCGAACTGAATCAGCCCACGCGTATGCAA CTCAGGATGACTGCCCTTGCTACAATCGGACATGCCGTGCCCTCGGTCGCTGAGAAGCAACACTGGGTTTTGCAG CAGCGCGTCCTCCCCCACGCCAACCGGATGCTGGCTTGTCTTTCAAAGAGCCCTTCAATACCACAGGAGCCGGCA CTGATCCAAGCGCTTCATAACTTGGGGCTTCTATACAAAAGTCAACGAAAGCCGAACGAGGCCAAGCAAATGTAC CAGCTTGCTCTGACCCGGCTGGAAACTTCGGCAGGACTTAATTACCCCCTGGCGTCCCGACTCCAAATCATCAAC AATCTCGCCAATCTTTATCGCAATCAGAAGGAATTTCACCAAGCAGAGAGTCTATATCAGCGTGCTCTGGCTGGA TTTGAGGAGACGCACGGACCGCGAAGTGAGTCCATTCTGGCAATTCTTGGGAACCTGGGAAATCTCTACAGCGAT CAAAGAAAATTCGCGGAGGCAGAGGAGGTGTATCGCAGAGCATTGATGGGATTTGAAAATGCTCTTGGCCATAGT AGCTCTTCGACGCTCAAAATTGTCCTCAATCTGGGGACTCTTTACACTGACCAAGGTAAATGGAAGGAAGCCAAA CAGATGTTTCGCCGGGCAGTGAATAGTCTTCACAGGACTCTAGATTTCAATGACCCGGCAACTCTGACGGTGGTT GTGAACATAGGGGATCTTTGCATCAAATCCGGGAAGTCCAGAAAGGCGAAACGAATCTATGAGGATGCGTTGTTA TGA |
| Transcript | >Ani_SJS100_1|g171.t1 ATGGCCGCGGCGGAAGCGATGCTGGATGAGGTGCATCCTGTCCCACCTGTTGACAAATCCGATCAAAACACTTAC ATAGTGGGGGCAATTCACGAACACAACGTTGTTATCGCCTCCCTACCCTTCGGAGTATATGGTACCATATCCGCA GCGGTTGTCGCGAGCCAACTCCGCGCCTCCTTCCCGTCTGTCCGAATTAGGTTAATGGTCAGAATTGGTGGAGGG GTGCCTGTATCCGACAATTCTTCAACGGAAGATGATATTCGGCTGGGGGATGTGGTCGTCAGCAAACCGTCGGGG ACCTCAGGCGGAGTGATCCAGTACGACTTTGGTAAAACCGGTCGAGAAGGCCGGTTTCACCGAATCTCGTGCCTC AATAAACCTCCTCAGATATTGTTGACTGCCATAGCAAAATTGGAAGCCGGTCATATAGGACATGAAAGCAGAATT TCGGATATCCTAGCCGATTTGCAGTCGAGGCAACCTGGTGTAGCTGCCAAGTTCAGATATCCTGGTCCGCAATGC GACCAACTTTTCCCTGCAGAGTATGAGCATTTCGAAGAGAGCAGTACGTGTGAGAGATGCGATCAAAGCAAACTC ATTGCTCGACAGGACCGAGCTTCAACACATCCTAAGATTCACTACGGGTTGATTGCCTCAGGAAATCAGGTGATG AAACACGGAATAACGCGAGATCGCCTGGCAGGAGAATTGGATGTCAAATGCTTCGAAATGGAAGCCGCCGGGTTG ATGGATCATTTCCCCTGTCTAGTGGTTCGTGGGATATGCGACTATTGCGATTCGCACAAGAACAAGAGATGGCAG CCATACGCCGCGGCTACCGCCGCGGCCTATGCGAAGGAGCTTCTCTCAGTGATCCCGGGCGCTCCCAAGTCTGAC GAAGGTAGAAACGAGCCGTTTCGGGTTCCATTTGACTTGACAGGCATCCCAGTCATGAATGGATTTCTTGGTCGT CGGGGAGACTTACTCCGGTTATGGAATTGTTTACAGCCGGGAAAACGAAACCAGCAAAAGGTAGTGGTCATTCAA GGACTTGGGGGGATGGGAAAGACACAGCTGGCCGTTGAATTTGCCCGACGTCACAAGAACGACTTTACAGCCGTT CTTTGGGTCAATGGGCAGAGCAGAGAAACGGTTCTTCATTCAATGGTATCGATTTTGTCGAGGCTGCCTGGTATA CAAGGATTCAAAGATGAATTTGCGGAGGAAAGCATTGAGGAAAAGGCCAGCCATACTCTCCGCTGGCTTAGCATG AATGAAAATTCCAAGTGGCTACTTGTGTTTGACAATGTCGATCATGACGGTGAAAATATTTGCGACTCCTTCCCA CCGGCTGATCATGGATCAATTTTGATCACTACCCGCCATGCGAAGCTGGCACGACTTGGTAATTACCAGCAGATT AGGCGACTTCCCACTGAAGAAGCGATGCAGCTTCTGGTGAACTGCTCGGGATATGAGATTGCACGTGAGAAATCT GCCCCAACAGTCAACAACGAAGCAAAAGACCTCGTCAATCGACTGGGGTGCCTACCCCTTGCTATCGTAATGGCC GGCTCCTACATTCACGGTACCGGAATAAGCTTCCGGAATTACCTGCGCCATTATGAACAGTCGTGGAAAAGAATG CAACAGACGACCACAGCCCACCTCGAATACTCGAACGGGAACCTCTTGACAACATGGAAGATTTCCTACGACGAA GTACGCAAAAGAAATGCAGCGGCTGCGAACTTACTGCTGCTTCTTTCTTACTTCGATAATCAAGACGTCTGGTTC CAGCTAATAAGGAGTGGAAATATTGCAATTTGCAGTATAATCCCCCAGTGGTTCCAAAGTATAGTTTCAGATGAA ACAAGCTTTCTCGCCAACGTCAATTTGCTGATTTCATTTTCTTTGGTGGAGTCAAATCCACAATGTTCCAGCTAC TCCGTGCACCCCGTGGTTCACGACTGGTGTCACTACGAACTACTGGGCGAACTGAATCAGCCCACGCGTATGCAA CTCAGGATGACTGCCCTTGCTACAATCGGACATGCCGTGCCCTCGGTCGCTGAGAAGCAACACTGGGTTTTGCAG CAGCGCGTCCTCCCCCACGCCAACCGGATGCTGGCTTGTCTTTCAAAGAGCCCTTCAATACCACAGGAGCCGGCA CTGATCCAAGCGCTTCATAACTTGGGGCTTCTATACAAAAGTCAACGAAAGCCGAACGAGGCCAAGCAAATGTAC CAGCTTGCTCTGACCCGGCTGGAAACTTCGGCAGGACTTAATTACCCCCTGGCGTCCCGACTCCAAATCATCAAC AATCTCGCCAATCTTTATCGCAATCAGAAGGAATTTCACCAAGCAGAGAGTCTATATCAGCGTGCTCTGGCTGGA TTTGAGGAGACGCACGGACCGCGAAGTGAGTCCATTCTGGCAATTCTTGGGAACCTGGGAAATCTCTACAGCGAT CAAAGAAAATTCGCGGAGGCAGAGGAGGTGTATCGCAGAGCATTGATGGGATTTGAAAATGCTCTTGGCCATAGT AGCTCTTCGACGCTCAAAATTGTCCTCAATCTGGGGACTCTTTACACTGACCAAGGTAAATGGAAGGAAGCCAAA CAGATGTTTCGCCGGGCAGTGAATAGTCTTCACAGGACTCTAGATTTCAATGACCCGGCAACTCTGACGGTGGTT GTGAACATAGGGGATCTTTGCATCAAATCCGGGAAGTCCAGAAAGGCGAAACGAATCTATGAGGATGCGTTGTTA TGA |
| Gene | >Ani_SJS100_1|g171.t1 ATGGCCGCGGCGGAAGCGATGCTGGATGAGGTGCATCCTGTCCCACCTGTTGACAAATCCGATCAAAACACTTAC ATAGTGGGGGCAATTCACGAACACAACGTTGTTATCGCCTCCCTACCCTTCGGAGTATATGGTACCATATCCGCA GCGGTTGTCGCGAGCCAACTCCGCGCCTCCTTCCCGTCTGTCCGAATTAGGTTAATGGTCAGAATTGGTGGAGGG GTGCCTGTATCCGACAATTCTTCAACGGAAGATGATATTCGGCTGGGGGATGTGGTCGTCAGCAAACCGTCGGGG ACCTCAGGCGGAGTGATCCAGTACGACTTTGGTAAAACCGGTCGAGAAGGCCGGTTTCACCGAATCTCGTGCCTC AATAAACCTCCTCAGATATTGTTGACTGCCATAGCAAAATTGGAAGCCGGTCATATAGGACATGAAAGCAGAATT TCGGATATCCTAGCCGATTTGCAGTCGAGGCAACCTGGTGTAGCTGCCAAGTTCAGATATCCTGGTCCGCAATGC GACCAACTTTTCCCTGCAGAGTATGAGCATTTCGAAGAGAGCAGTACGTGTGAGAGATGCGATCAAAGCAAACTC ATTGCTCGACAGGACCGAGCTTCAACACATCCTAAGATTCACTACGGGTTGATTGCCTCAGGAAATCAGGTGATG AAACACGGAATAACGCGAGATCGCCTGGCAGGAGAATTGGATGTCAAATGCTTCGAAATGGAAGCCGCCGGGTTG ATGGATCATTTCCCCTGTCTAGTGGTTCGTGGGATATGCGACTATTGCGATTCGCACAAGAACAAGAGATGGCAG CCATACGCCGCGGCTACCGCCGCGGCCTATGCGAAGGAGCTTCTCTCAGTGATCCCGGGCGCTCCCAAGTCTGAC GAAGGTGAGTTCGTCATCAGTAATGCTTATGTCCGTATGTTTGATTCAATCACGCTGACCGTCGATCTCAGGTAG AAACGAGCCGTTTCGGGTTCCATTTGACTTGACAGGCATCCCAGTCATGAATGGATTTCTTGGTCGTCGGGGAGA CTTACTCCGGTTATGGAATTGTTTACAGCCGGGAAAACGAAACCAGCAAAAGGTAGTGGTCATTCAAGGACTTGG GGGGATGGGAAAGACACAGCTGGCCGTTGAATTTGCCCGACGTCACAAGAACGACTTTACAGCCGTTCTTTGGGT CAATGGGCAGAGCAGAGAAACGGTTCTTCATTCAATGGTATCGATTTTGTCGAGGCTGCCTGGTATACAAGGATT CAAAGATGAATTTGCGGAGGAAAGCATTGAGGAAAAGGCCAGCCATACTCTCCGCTGGCTTAGCATGAATGAAAA TTCCAAGTGGCTACTTGTGTTTGACAATGTCGATCATGACGGTGAAAATATTTGCGACTCCTTCCCACCGGCTGA TCATGGATCAATTTTGATCACTACCCGCCATGCGAAGCTGGCACGACTTGGTAATTACCAGCAGATTAGGCGACT TCCCACTGAAGAAGCGATGCAGCTTCTGGTGAACTGCTCGGGATATGAGATTGCACGTGAGAAATCTGCCCCAAC AGTCAACAACGGTAAGGTCCTCTCTGGAATCTCTTTCCCATTATAGGATGTCAGGAACGGCGAAGTGCTCATATT ATATAGAAGCAAAAGACCTCGTCAATCGACTGGGGTGCCTACCCCTTGCTATCGTAATGGCCGGCTCCTACATTC ACGGTACCGGAATAAGCTTCCGGAATTACCTGCGCCATTATGAACAGTCGTGGAAAAGAATGCAACAGACGACCA CAGCCCACCTCGAATACTCGAACGGGAACCTCTTGACAACATGGAAGATTTCCTACGACGAAGTACGCAAAAGAA ATGCAGCGGCTGCGAACTTACTGCTGCTTCTTTCTTACTTCGATAATCAAGACGTCTGGTTCCAGCTAATAAGGA GTGGAAATATTGCAATTTGCAGTATAATCCCCCAGTGGTTCCAAAGTATAGTTTCAGATGAAACAAGCTTTCTCG CCAACGTCAATTTGCTGATTTCATTTTCTTTGGTGGAGTCAAATCCACAATGTTCCAGCTACTCCGTGCACCCCG TGGTTCACGACTGGTGTCACTACGAACTACTGGGCGAACTGAATCAGCCCACGCGTATGCAACTCAGGATGACTG CCCTTGCTACAATCGGACATGCCGTGCCCTCGGTCGCTGAGAAGCAACACTGGGTTTTGCAGCAGCGCGTCCTCC CCCACGCCAACCGGATGCTGGCTTGTCTTTCAAAGAGCCCTTCAATACCACAGGAGCCGGCACTGATCCAAGCGC TTCATAACTTGGGGCTTCTATACAAAAGTCAACGAAAGCCGAACGAGGCCAAGCAAATGTACCAGCTTGCTCTGA CCCGGCTGGAAACTTCGGCAGGACTTAATTACCCCCTGGCGTCCCGACTCCAAATCATCAACAATCTCGCCAATC TTTATCGCAATCAGAAGGAATTTCACCAAGCAGAGAGTCTATATCAGCGTGCTCTGGCTGGATTTGAGGAGACGC ACGGACCGCGAAGTGAGTCCATTCTGGCAATTCTTGGGAACCTGGGAAATCTCTACAGCGATCAAAGAAAATTCG CGGAGGCAGAGGAGGTGTATCGCAGAGCATTGATGGGATTTGAAAATGCTCTTGGCCATAGTAGCTCTTCGACGC TCAAAATTGTCCTCAATCTGGGGACTCTTTACACTGACCAAGGTAAATGGAAGGAAGCCAAACAGATGTTTCGCC GGGCAGTGAATAGTCTTCACAGGACTCTAGATTTCAATGACCCGGCAACTCTGACGGTGGTTGTGAACATAGGGG ATCTTTGCATCAAATCCGGGAAGTCCAGAAAGGCGAAACGAATCTATGAGGATGCGTTGTTATGA |