Protein ID | Ani_SJS100_1|g169.t1 |
Gene name | |
Location | scaffold_001:556123..556969 |
Strand | + |
Gene length (bp) | 846 |
Transcript length (bp) | 846 |
Coding sequence length (bp) | 846 |
Protein length (aa) | 282 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12706 | Lactamase_B_2 | Beta-lactamase superfamily domain | 6.7E-12 | 70 | 243 |
Orthofinder run ID | 3 |
Orthogroup | 1984 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g169.t1 MAPFQGSVSVTHITTATAVINIDGICFLTDPVFCPAGSEYIYDGWAKADWKEWGFNGRPPTSTLRSFEGPALQLH DLPPIDAVLLSHEDHVDNLDPLGRQLLDGRRVFTTPDGTKNLAPRPGVVGLQPWQTVEKLIGGKHFRITGTPCKH FPGGEVTGFIVECDSFGVSDDGLPNVVYFSGDTVWIDELAEIRKKWHVSVAVLNLGNALFESPKGMLQITFDGQQ AAHLMRVIGVDVMVPIHFESWEHFTEHQADLKRVFEKEEVEGKVCWLVPGVEKRVL* |
Coding | >Ani_SJS100_1|g169.t1 ATGGCTCCCTTCCAAGGTTCCGTCTCAGTCACCCACATCACCACTGCCACCGCAGTCATCAACATCGACGGCATC TGCTTCCTCACCGACCCAGTCTTCTGCCCAGCCGGGTCCGAATACATCTACGACGGTTGGGCAAAAGCGGACTGG AAAGAATGGGGCTTCAACGGCCGCCCTCCAACCTCAACGCTTCGCAGCTTCGAGGGTCCCGCGCTCCAGCTTCAC GACCTCCCGCCCATCGATGCTGTGCTCCTTAGCCACGAAGACCATGTCGACAACCTCGACCCCCTGGGCCGACAG CTCCTTGACGGCCGCCGCGTCTTCACCACTCCTGACGGTACCAAGAACCTGGCTCCTCGGCCCGGCGTCGTCGGC CTCCAGCCCTGGCAGACAGTTGAGAAGTTGATCGGCGGCAAGCACTTCCGTATCACCGGTACGCCATGCAAGCAT TTTCCCGGTGGAGAGGTCACTGGGTTTATTGTTGAGTGTGACTCCTTCGGGGTCAGCGATGATGGATTGCCGAAT GTGGTGTATTTCTCGGGCGATACTGTTTGGATTGATGAGCTAGCGGAAATTAGAAAGAAGTGGCATGTTTCTGTG GCAGTGCTGAACCTGGGGAATGCGTTGTTCGAGTCGCCAAAGGGGATGTTGCAGATAACGTTTGATGGGCAGCAG GCGGCGCATTTGATGCGAGTGATTGGGGTGGATGTTATGGTGCCGATTCACTTTGAGTCGTGGGAGCATTTTACC GAACATCAGGCGGATTTGAAGCGCGTGTTTGAGAAGGAAGAGGTTGAGGGGAAGGTGTGTTGGTTGGTGCCGGGG GTGGAGAAAAGGGTTCTCTAG |
Transcript | >Ani_SJS100_1|g169.t1 ATGGCTCCCTTCCAAGGTTCCGTCTCAGTCACCCACATCACCACTGCCACCGCAGTCATCAACATCGACGGCATC TGCTTCCTCACCGACCCAGTCTTCTGCCCAGCCGGGTCCGAATACATCTACGACGGTTGGGCAAAAGCGGACTGG AAAGAATGGGGCTTCAACGGCCGCCCTCCAACCTCAACGCTTCGCAGCTTCGAGGGTCCCGCGCTCCAGCTTCAC GACCTCCCGCCCATCGATGCTGTGCTCCTTAGCCACGAAGACCATGTCGACAACCTCGACCCCCTGGGCCGACAG CTCCTTGACGGCCGCCGCGTCTTCACCACTCCTGACGGTACCAAGAACCTGGCTCCTCGGCCCGGCGTCGTCGGC CTCCAGCCCTGGCAGACAGTTGAGAAGTTGATCGGCGGCAAGCACTTCCGTATCACCGGTACGCCATGCAAGCAT TTTCCCGGTGGAGAGGTCACTGGGTTTATTGTTGAGTGTGACTCCTTCGGGGTCAGCGATGATGGATTGCCGAAT GTGGTGTATTTCTCGGGCGATACTGTTTGGATTGATGAGCTAGCGGAAATTAGAAAGAAGTGGCATGTTTCTGTG GCAGTGCTGAACCTGGGGAATGCGTTGTTCGAGTCGCCAAAGGGGATGTTGCAGATAACGTTTGATGGGCAGCAG GCGGCGCATTTGATGCGAGTGATTGGGGTGGATGTTATGGTGCCGATTCACTTTGAGTCGTGGGAGCATTTTACC GAACATCAGGCGGATTTGAAGCGCGTGTTTGAGAAGGAAGAGGTTGAGGGGAAGGTGTGTTGGTTGGTGCCGGGG GTGGAGAAAAGGGTTCTCTAG |
Gene | >Ani_SJS100_1|g169.t1 ATGGCTCCCTTCCAAGGTTCCGTCTCAGTCACCCACATCACCACTGCCACCGCAGTCATCAACATCGACGGCATC TGCTTCCTCACCGACCCAGTCTTCTGCCCAGCCGGGTCCGAATACATCTACGACGGTTGGGCAAAAGCGGACTGG AAAGAATGGGGCTTCAACGGCCGCCCTCCAACCTCAACGCTTCGCAGCTTCGAGGGTCCCGCGCTCCAGCTTCAC GACCTCCCGCCCATCGATGCTGTGCTCCTTAGCCACGAAGACCATGTCGACAACCTCGACCCCCTGGGCCGACAG CTCCTTGACGGCCGCCGCGTCTTCACCACTCCTGACGGTACCAAGAACCTGGCTCCTCGGCCCGGCGTCGTCGGC CTCCAGCCCTGGCAGACAGTTGAGAAGTTGATCGGCGGCAAGCACTTCCGTATCACCGGTACGCCATGCAAGCAT TTTCCCGGTGGAGAGGTCACTGGGTTTATTGTTGAGTGTGACTCCTTCGGGGTCAGCGATGATGGATTGCCGAAT GTGGTGTATTTCTCGGGCGATACTGTTTGGATTGATGAGCTAGCGGAAATTAGAAAGAAGTGGCATGTTTCTGTG GCAGTGCTGAACCTGGGGAATGCGTTGTTCGAGTCGCCAAAGGGGATGTTGCAGATAACGTTTGATGGGCAGCAG GCGGCGCATTTGATGCGAGTGATTGGGGTGGATGTTATGGTGCCGATTCACTTTGAGTCGTGGGAGCATTTTACC GAACATCAGGCGGATTTGAAGCGCGTGTTTGAGAAGGAAGAGGTTGAGGGGAAGGTGTGTTGGTTGGTGCCGGGG GTGGAGAAAAGGGTTCTCTAG |