© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1686.t1 |
| Gene name | |
| Location | scaffold_006:339704..340929 |
| Strand | + |
| Gene length (bp) | 1225 |
| Transcript length (bp) | 1104 |
| Coding sequence length (bp) | 1104 |
| Protein length (aa) | 368 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 8.0E-25 | 48 | 232 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 2.8E-15 | 56 | 230 |
| PF08659 | KR | KR domain | 6.3E-07 | 48 | 155 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1686.t1 MHSLIPTIFYDSSPTTLGIYTILCGLFLYSASKLFGFGRNQFVVQGRTVVITGGSEGMGKAVACQLAEKGANVVL VARTESKLQDALEAVKGTAAEADRQRFHYICADLTNAAECDRVMAEVTEWNHGQSPDIVWCCAGYCSPGFFAETP VQTLRDQMDTVYWTAANTAHAILRRWLVPISPSQQMPLPPRHLIFTCSTLAFVPIAGYAPYSPAKAAIRSLSDTL SQEIEMYNGSRADKCRSEAPATDVKIHTVFPMGILSPGFDNEQKLKPELTKKLEAADKPQTPREVANIAIKALER GEYMITTMFVGDVMKGSALGGSQRNSFIKDTFTGWLSNLLFLHVSPDLRRQAWSWGEKHGVPSRPRE* |
| Coding | >Ani_SJS100_1|g1686.t1 ATGCATTCTCTGATACCCACCATCTTTTACGACTCTTCCCCGACGACGCTGGGAATTTATACCATTCTTTGCGGA CTATTCCTATACTCTGCTAGCAAATTGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCAGGACCGTCGTT ATCACGGGCGGTTCGGAGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTGCAGAGAAGGGTGCAAATGTTGTGCTT GTCGCACGCACGGAGTCGAAGCTCCAGGATGCCCTCGAGGCTGTCAAGGGTACGGCGGCTGAAGCCGACCGGCAG AGATTCCACTACATCTGTGCGGATCTGACCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAATGG AACCACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGATACTGCAGCCCCGGCTTCTTTGCCGAGACCCCC GTCCAGACATTGAGGGACCAAATGGATACGGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGACGG TGGCTAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTCCCAGACACCTTATCTTCACATGCTCTACCCTC GCATTTGTGCCCATTGCTGGTTATGCTCCTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTCTC AGCCAAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGTGCCGCTCGGAGGCTCCAGCCACGGACGTGAAG ATCCATACAGTCTTCCCCATGGGCATTCTCAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTACT AAGAAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGGTTGCAAACATTGCGATCAAGGCCCTGGAGAGG GGCGAGTACATGATCACCACGATGTTCGTTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGAAT TCATTCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGTTGTTCCTGCATGTCAGCCCCGATCTCAGGAGG CAGGCCTGGAGCTGGGGTGAGAAGCACGGCGTCCCATCTCGCCCGAGAGAGTAA |
| Transcript | >Ani_SJS100_1|g1686.t1 ATGCATTCTCTGATACCCACCATCTTTTACGACTCTTCCCCGACGACGCTGGGAATTTATACCATTCTTTGCGGA CTATTCCTATACTCTGCTAGCAAATTGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCAGGACCGTCGTT ATCACGGGCGGTTCGGAGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTGCAGAGAAGGGTGCAAATGTTGTGCTT GTCGCACGCACGGAGTCGAAGCTCCAGGATGCCCTCGAGGCTGTCAAGGGTACGGCGGCTGAAGCCGACCGGCAG AGATTCCACTACATCTGTGCGGATCTGACCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAATGG AACCACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGATACTGCAGCCCCGGCTTCTTTGCCGAGACCCCC GTCCAGACATTGAGGGACCAAATGGATACGGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGACGG TGGCTAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTCCCAGACACCTTATCTTCACATGCTCTACCCTC GCATTTGTGCCCATTGCTGGTTATGCTCCTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTCTC AGCCAAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGTGCCGCTCGGAGGCTCCAGCCACGGACGTGAAG ATCCATACAGTCTTCCCCATGGGCATTCTCAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTACT AAGAAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGGTTGCAAACATTGCGATCAAGGCCCTGGAGAGG GGCGAGTACATGATCACCACGATGTTCGTTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGAAT TCATTCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGTTGTTCCTGCATGTCAGCCCCGATCTCAGGAGG CAGGCCTGGAGCTGGGGTGAGAAGCACGGCGTCCCATCTCGCCCGAGAGAGTAA |
| Gene | >Ani_SJS100_1|g1686.t1 ATGCATTCTCTGATACCCACCATCTTTTACGACTCTTCCCCGACGACGCTGGGAATTTATACCATTCTTTGCGGA CTATTCCTATACTCTGCTAGCAAATTGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCAGGGTATGTTTC CATCGTCGCCTCCCATGTGTTGCCCTTAGCATGGTTGGCTAACCTCTTCTTTAGACCGTCGTTATCACGGGCGGT TCGGAGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTGCAGAGAAGGGTGCAAATGTTGTGCTTGTCGCACGCACG GAGTCGAAGCTCCAGGATGCCCTCGAGGCTGTCAAGGTAAGTAGAGCCTCGGTTTTTTTGGAAGAATCTCAGCTA ACTCTCAATTCTCTTGAAGGGTACGGCGGCTGAAGCCGACCGGCAGAGATTCCACTACATCTGTGCGGATCTGAC CAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAATGGAACCACGGACAATCTCCCGATATCGTATG GTGCTGCGCAGGATACTGCAGCCCCGGCTTCTTTGCCGAGACCCCCGTCCAGACATTGAGGGACCAAATGGATAC GGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGACGGTGGCTAGTACCTATTAGCCCCAGCCAGCA GATGCCACTACCTCCCAGACACCTTATCTTCACATGCTCTACCCTCGCATTTGTGCCCATTGCTGGTTATGCTCC TTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTCTCAGCCAAGAAATTGAGATGTACAACGGTTC TCGCGCCGACAAGTGCCGCTCGGAGGCTCCAGCCACGGACGTGAAGATCCATACAGTCTTCCCCATGGGCATTCT CAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTACTAAGAAGCTGGAGGCTGCTGACAAGCCACA GACTCCGAGGGAGGTTGCAAACATTGCGATCAAGGCCCTGGAGAGGGGCGAGTACATGATCACCACGATGTTCGT TGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGAATTCATTCATTAAGGATACTTTCACTGGCTG GCTCAGCAACTTGTTGTTCCTGCATGTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCTGGGGTGAGAAGCACGG CGTCCCATCTCGCCCGAGAGAGTAA |