Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1674.t1
Gene name
Locationscaffold_006:291596..292486
Strand-
Gene length (bp)890
Transcript length (bp)612
Coding sequence length (bp)612
Protein length (aa) 204

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01105 EMP24_GP25L emp24/gp25L/p24 family/GOLD 5.9E-49 22 198

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1674.t1
MRFSATTLLITALAWFSTVTAHNIQLRAHSRECFHESLHKDDKMTVSFQVGDREFGGSGNLEIDFWVEDPLGNRQ
YYKHAISSEDYSFNAHADGKYVYCFSNEGWASNSKEVSFNVHGIVYVPESELAQDPLEAEVRKLSEALAQVKDEQ
SYIVVRERVHRNTAESTNARVKWWSIFQLAVLIGEGIFQVWWLKRFFEVKRVV*
Coding >Ani_SJS100_1|g1674.t1
ATGCGATTCTCCGCAACGACCCTCCTGATCACGGCGCTGGCGTGGTTCAGCACCGTGACCGCACACAACATCCAG
CTCCGGGCTCACTCCCGCGAATGCTTCCACGAGTCATTGCACAAGGATGACAAGATGACTGTCTCCTTCCAGGTC
GGTGACCGGGAATTTGGAGGCAGTGGCAACCTGGAGATCGATTTCTGGGTCGAGGACCCCCTTGGTAACCGTCAA
TACTACAAGCACGCCATCTCGTCGGAGGATTACTCGTTCAACGCGCACGCGGACGGCAAATACGTCTACTGCTTC
AGCAACGAAGGATGGGCCTCGAACTCCAAGGAAGTCTCGTTCAACGTTCACGGAATTGTCTACGTCCCCGAATCG
GAATTGGCGCAGGATCCCTTGGAGGCGGAAGTCCGCAAGCTCTCGGAGGCTCTCGCACAGGTTAAGGATGAGCAG
TCGTACATTGTTGTGAGAGAGCGGGTTCACCGGAACACGGCCGAGAGCACCAACGCCCGGGTGAAGTGGTGGAGT
ATCTTCCAGCTGGCTGTGCTGATCGGCGAGGGTATTTTCCAGGTGTGGTGGCTCAAGAGATTCTTCGAGGTCAAG
CGTGTTGTCTAA
Transcript >Ani_SJS100_1|g1674.t1
ATGCGATTCTCCGCAACGACCCTCCTGATCACGGCGCTGGCGTGGTTCAGCACCGTGACCGCACACAACATCCAG
CTCCGGGCTCACTCCCGCGAATGCTTCCACGAGTCATTGCACAAGGATGACAAGATGACTGTCTCCTTCCAGGTC
GGTGACCGGGAATTTGGAGGCAGTGGCAACCTGGAGATCGATTTCTGGGTCGAGGACCCCCTTGGTAACCGTCAA
TACTACAAGCACGCCATCTCGTCGGAGGATTACTCGTTCAACGCGCACGCGGACGGCAAATACGTCTACTGCTTC
AGCAACGAAGGATGGGCCTCGAACTCCAAGGAAGTCTCGTTCAACGTTCACGGAATTGTCTACGTCCCCGAATCG
GAATTGGCGCAGGATCCCTTGGAGGCGGAAGTCCGCAAGCTCTCGGAGGCTCTCGCACAGGTTAAGGATGAGCAG
TCGTACATTGTTGTGAGAGAGCGGGTTCACCGGAACACGGCCGAGAGCACCAACGCCCGGGTGAAGTGGTGGAGT
ATCTTCCAGCTGGCTGTGCTGATCGGCGAGGGTATTTTCCAGGTGTGGTGGCTCAAGAGATTCTTCGAGGTCAAG
CGTGTTGTCTAA
Gene >Ani_SJS100_1|g1674.t1
ATGCGATTCTCCGCAACGACCCTCCTGATCACGGCGCTGGCGTGGTTCAGCACCGTGACCGCACACAACATCCAG
CTCCGGGCTCACTCCCGCGAATGCTTCCACGAGTCATTGCACAAGGATGACAAGATGACTGTCTCCTTCCAGGTC
GGTGACCGGGAATTTGGAGGCAGTGGCAACCTGGAGATCGATTTCTGGGTAGGTTCCCTGAATAGCATACTAGCT
GTCAATCTCCGCGCGGACTTTGGGGTGGTTTGATATCCCATATCAAGCTTCCAAACCTGCAAAACCAATCCGAAG
AATATAGTCGCTCACGTGTGATTGGAACAAACAGGTCGAGGACCCCCTTGGTAACCGTCAATACTACAAGCACGC
CATCTCGTCGGAGGATTACTCGTTCAACGCGCACGCGGACGGCAAATACGTCTACTGCTTCAGCAACGAAGGATG
GGCCTCGAACTCCAAGGAAGTCTCGTTCAACGTTCACGGAATTGTCTACGTCCCCGAATCGGAATTGGCGCAGGA
TCCCTTGGAGGCGGAAGGTAGGATTGAATACCCAATCATCGTTTATACAAATCCTCGGCGACCGTATGAGCTAAC
CGCGGTTGTCTTCTACATCGCAGTCCGCAAGCTCTCGGAGGCTCTCGCACAGGTTAAGGATGAGCAGTCGTACAT
TGTTGTGAGAGAGCGGGTTCACCGGAACACGGCCGAGAGCACCAACGCCCGGGTGAAGTGGTGGAGTATCTTCCA
GCTGGCTGTGCTGATCGGCGAGGGTATTTTCCAGGTGTGGTGGCTCAAGAGATTCTTCGAGGTTAGTCAATCCTT
TCTTCGTCCGTCTAGGTGACTATGACTAACGATGGGAACGTGTATAGGTCAAGCGTGTTGTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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