Protein ID | Ani_SJS100_1|g1644.t1 |
Gene name | |
Location | scaffold_006:207964..210784 |
Strand | - |
Gene length (bp) | 2820 |
Transcript length (bp) | 2760 |
Coding sequence length (bp) | 2760 |
Protein length (aa) | 920 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01487 | DHquinase_I | Type I 3-dehydroquinase | 1.1E-37 | 336 | 567 |
PF08501 | Shikimate_dh_N | Shikimate dehydrogenase substrate binding domain | 1.3E-21 | 580 | 660 |
PF01202 | SKI | Shikimate kinase | 1.4E-20 | 108 | 218 |
PF18317 | SDH_C | Shikimate 5'-dehydrogenase C-terminal domain | 9.8E-10 | 862 | 892 |
PF01488 | Shikimate_DH | Shikimate / quinate 5-dehydrogenase | 2.1E-06 | 721 | 765 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | Yes |
GO:0003855 | 3-dehydroquinate dehydratase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | No |
GO:0016491 | oxidoreductase activity | No |
GO:0016836 | hydro-lyase activity | No |
GO:0016829 | lyase activity | No |
GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | No |
GO:0016835 | carbon-oxygen lyase activity | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1644.t1 MSILVNPPKRKLDELEGPVEHQSSRRLSHLPFTSNTPHAVDPTPGNDAPPRPRVNSAPQTEHSEASPWLNASLRE LSSNRQSPVSFDGPFQAQRKFAPNASIVLTGIRGTGKSSLAVILAATSGRRLIDADRYFQQVTGRTRASYKKEFD LVEYRQQEARVMESMLSENQEGCVIACGPGSMERSGQTLLREYAKTHPVIYILRDPESIQSYLKAWNTDKVRRFL ELSGPIYRACSNLEFFNVSEKGLADHPIPKDGHHDSQLESELDQRVQAITPFLTLKQLQRDFLCFIAFATGDTTD LSRHNSSFPLSMQPVESRTYTYAVTVPISSMLERDLDIEELESTSDAFELKLDVAEPPSSHLGLDSSFADTISRA FANVRRNTVVPLIYHVESNVCRYGLSAEHKDPSRRSDPEYLKLVQHGLRLAPEFVTVDMSYDDKVLSQVIAYKGS SKVIGHFAATQPPARGWDDAQYVELYERAKRLGCDMVRLTQPAVTIDDNFAVQRFRDHIKSLPTPQLPVIAYNAG PLGRLSCCFNPILTPVTHPSMVAEMQSKGLPCITLREAQEALYASFTLDPLHFFVFGANITYSLSPAMHNAAYKR CGMPHHYKLHQSSTLRGLNELVENPHFGGTSVSLPFKTEAIPLLHSMSPHARAIGAVNTLIPIRMLGDKALDADN SSLYMEKSRAGPIKALHGDNTDWIGIGNCFRRGLSPANAIRPSSTGLVIGAGGMARAAIYSMIHLGVQNIFVYNR TLANAEKLAYHYNRQNLPSPGQAGSVARPQVHVLQSLQDSWPASYKQPTVVCSCIPTHSIGGQPAPNFEMPVQWL ESPTGGVVVELAYKTLNTPLMKQIRALSHRGWVALDGLDVLPEQGFAQFELFTGRRAPRRLMRTVVLKEYEGEEG QYDEQAIQSRIESLDGQPT* |
Coding | >Ani_SJS100_1|g1644.t1 ATGTCAATCCTCGTGAATCCTCCCAAACGCAAGCTAGACGAGCTGGAAGGTCCGGTCGAGCATCAGAGCAGCAGG CGCTTGTCGCATCTCCCTTTCACCTCGAATACCCCCCATGCAGTAGATCCTACTCCCGGCAACGATGCGCCTCCA CGTCCCCGTGTCAATTCCGCTCCCCAGACGGAACACTCAGAGGCGTCGCCTTGGTTGAATGCTTCCTTGCGCGAG CTGAGCTCCAATCGTCAGTCGCCAGTTTCTTTTGACGGGCCTTTCCAGGCTCAAAGGAAATTCGCTCCCAATGCG TCCATTGTGTTGACCGGAATCCGCGGCACGGGAAAGTCCAGTCTAGCAGTCATTCTGGCGGCGACCTCGGGTAGG CGACTGATCGATGCAGACCGGTATTTTCAGCAGGTGACCGGTCGTACACGCGCTTCCTACAAGAAAGAGTTCGAT CTGGTTGAGTATCGCCAGCAGGAAGCCAGGGTGATGGAGTCCATGCTCTCCGAAAACCAAGAAGGCTGCGTCATT GCGTGCGGGCCTGGTTCCATGGAGCGCAGTGGGCAGACGCTGCTGAGGGAGTACGCGAAGACCCATCCAGTCATC TACATCCTCCGAGACCCCGAGAGCATCCAGTCTTACCTGAAAGCGTGGAACACAGACAAGGTTCGTCGTTTTCTG GAACTCTCGGGGCCCATCTATCGCGCCTGTTCCAACCTCGAATTCTTCAATGTCTCCGAGAAGGGCCTTGCGGAC CATCCGATTCCAAAAGACGGTCACCATGACTCGCAATTAGAATCGGAACTTGATCAACGAGTCCAAGCAATCACT CCTTTCCTTACCCTCAAACAATTACAGCGGGATTTTCTGTGTTTCATTGCGTTCGCAACGGGCGACACCACAGAC CTCAGCCGCCATAACTCATCCTTCCCTCTGTCGATGCAACCAGTTGAATCGCGCACCTATACTTATGCCGTAACC GTCCCTATCTCGTCCATGTTAGAACGTGATCTGGACATCGAGGAGCTAGAGTCGACCTCCGATGCGTTTGAGCTG AAGCTGGATGTGGCCGAGCCACCTTCCTCCCATCTCGGTTTGGACTCGAGCTTTGCCGATACCATTAGTCGGGCG TTCGCCAATGTCCGACGGAACACCGTCGTTCCATTAATATACCATGTGGAGAGTAATGTATGTCGTTATGGCTTG AGCGCAGAACACAAGGATCCCTCGCGGCGGTCGGATCCTGAGTATCTCAAATTAGTCCAGCACGGCCTACGATTA GCCCCGGAGTTTGTGACAGTAGATATGTCCTACGACGACAAGGTACTTTCACAGGTCATAGCATATAAAGGGTCC AGCAAAGTGATCGGGCACTTTGCTGCTACGCAGCCACCGGCGCGGGGCTGGGATGATGCACAGTATGTCGAGCTC TACGAGCGAGCCAAAAGGTTAGGATGCGACATGGTTCGGTTGACACAGCCGGCGGTGACAATTGACGACAACTTT GCCGTGCAACGCTTTCGCGACCATATCAAGTCCCTTCCTACCCCGCAACTGCCTGTCATCGCGTACAATGCGGGC CCATTGGGCCGGTTGTCATGCTGTTTCAACCCGATCTTGACCCCTGTCACCCATCCGTCAATGGTCGCCGAGATG CAGTCCAAAGGGTTGCCGTGTATCACCCTGCGTGAGGCACAGGAGGCTCTGTACGCCTCGTTCACATTGGACCCC TTGCACTTCTTTGTTTTCGGCGCCAACATCACCTACAGTCTGTCTCCTGCCATGCATAATGCCGCCTATAAGCGA TGCGGAATGCCGCACCATTACAAGCTCCACCAGTCGTCGACTCTGCGAGGCCTCAATGAGTTGGTGGAGAATCCG CATTTTGGTGGCACCAGTGTCAGCCTGCCGTTCAAAACCGAAGCCATTCCGTTACTGCATTCCATGTCTCCCCAT GCTCGAGCCATTGGCGCCGTGAACACGCTAATTCCTATTCGGATGTTGGGAGACAAAGCCCTCGACGCCGATAAT TCCTCGTTGTACATGGAGAAGAGTCGCGCAGGGCCGATCAAGGCCTTGCACGGAGACAATACCGACTGGATCGGA ATTGGAAATTGTTTCCGAAGAGGCCTGTCACCCGCGAACGCCATCCGCCCCTCGTCCACTGGGCTAGTCATTGGC GCGGGTGGCATGGCGCGCGCTGCCATCTACTCCATGATCCACCTGGGCGTGCAGAATATCTTCGTCTACAATCGG ACCCTAGCGAATGCCGAAAAACTCGCCTACCATTATAATCGCCAGAATCTCCCTTCCCCGGGCCAGGCCGGGTCG GTGGCACGGCCTCAGGTGCACGTGCTGCAAAGCCTACAGGACAGCTGGCCTGCCAGTTACAAGCAACCGACCGTC GTCTGTTCATGTATCCCAACTCACAGCATCGGAGGGCAGCCGGCCCCGAACTTCGAAATGCCAGTGCAGTGGCTC GAAAGCCCGACGGGAGGCGTTGTCGTTGAGTTGGCGTATAAAACGCTCAATACCCCATTGATGAAACAAATCCGA GCACTTTCGCACCGTGGCTGGGTCGCTCTGGACGGACTAGATGTCCTCCCGGAGCAAGGTTTCGCCCAGTTCGAG CTGTTCACAGGTCGCCGGGCGCCGCGACGGCTCATGCGGACCGTAGTCTTGAAGGAATACGAGGGCGAAGAAGGT CAATACGACGAGCAGGCAATCCAAAGCAGGATTGAGAGTCTAGATGGACAACCCACCTGA |
Transcript | >Ani_SJS100_1|g1644.t1 ATGTCAATCCTCGTGAATCCTCCCAAACGCAAGCTAGACGAGCTGGAAGGTCCGGTCGAGCATCAGAGCAGCAGG CGCTTGTCGCATCTCCCTTTCACCTCGAATACCCCCCATGCAGTAGATCCTACTCCCGGCAACGATGCGCCTCCA CGTCCCCGTGTCAATTCCGCTCCCCAGACGGAACACTCAGAGGCGTCGCCTTGGTTGAATGCTTCCTTGCGCGAG CTGAGCTCCAATCGTCAGTCGCCAGTTTCTTTTGACGGGCCTTTCCAGGCTCAAAGGAAATTCGCTCCCAATGCG TCCATTGTGTTGACCGGAATCCGCGGCACGGGAAAGTCCAGTCTAGCAGTCATTCTGGCGGCGACCTCGGGTAGG CGACTGATCGATGCAGACCGGTATTTTCAGCAGGTGACCGGTCGTACACGCGCTTCCTACAAGAAAGAGTTCGAT CTGGTTGAGTATCGCCAGCAGGAAGCCAGGGTGATGGAGTCCATGCTCTCCGAAAACCAAGAAGGCTGCGTCATT GCGTGCGGGCCTGGTTCCATGGAGCGCAGTGGGCAGACGCTGCTGAGGGAGTACGCGAAGACCCATCCAGTCATC TACATCCTCCGAGACCCCGAGAGCATCCAGTCTTACCTGAAAGCGTGGAACACAGACAAGGTTCGTCGTTTTCTG GAACTCTCGGGGCCCATCTATCGCGCCTGTTCCAACCTCGAATTCTTCAATGTCTCCGAGAAGGGCCTTGCGGAC CATCCGATTCCAAAAGACGGTCACCATGACTCGCAATTAGAATCGGAACTTGATCAACGAGTCCAAGCAATCACT CCTTTCCTTACCCTCAAACAATTACAGCGGGATTTTCTGTGTTTCATTGCGTTCGCAACGGGCGACACCACAGAC CTCAGCCGCCATAACTCATCCTTCCCTCTGTCGATGCAACCAGTTGAATCGCGCACCTATACTTATGCCGTAACC GTCCCTATCTCGTCCATGTTAGAACGTGATCTGGACATCGAGGAGCTAGAGTCGACCTCCGATGCGTTTGAGCTG AAGCTGGATGTGGCCGAGCCACCTTCCTCCCATCTCGGTTTGGACTCGAGCTTTGCCGATACCATTAGTCGGGCG TTCGCCAATGTCCGACGGAACACCGTCGTTCCATTAATATACCATGTGGAGAGTAATGTATGTCGTTATGGCTTG AGCGCAGAACACAAGGATCCCTCGCGGCGGTCGGATCCTGAGTATCTCAAATTAGTCCAGCACGGCCTACGATTA GCCCCGGAGTTTGTGACAGTAGATATGTCCTACGACGACAAGGTACTTTCACAGGTCATAGCATATAAAGGGTCC AGCAAAGTGATCGGGCACTTTGCTGCTACGCAGCCACCGGCGCGGGGCTGGGATGATGCACAGTATGTCGAGCTC TACGAGCGAGCCAAAAGGTTAGGATGCGACATGGTTCGGTTGACACAGCCGGCGGTGACAATTGACGACAACTTT GCCGTGCAACGCTTTCGCGACCATATCAAGTCCCTTCCTACCCCGCAACTGCCTGTCATCGCGTACAATGCGGGC CCATTGGGCCGGTTGTCATGCTGTTTCAACCCGATCTTGACCCCTGTCACCCATCCGTCAATGGTCGCCGAGATG CAGTCCAAAGGGTTGCCGTGTATCACCCTGCGTGAGGCACAGGAGGCTCTGTACGCCTCGTTCACATTGGACCCC TTGCACTTCTTTGTTTTCGGCGCCAACATCACCTACAGTCTGTCTCCTGCCATGCATAATGCCGCCTATAAGCGA TGCGGAATGCCGCACCATTACAAGCTCCACCAGTCGTCGACTCTGCGAGGCCTCAATGAGTTGGTGGAGAATCCG CATTTTGGTGGCACCAGTGTCAGCCTGCCGTTCAAAACCGAAGCCATTCCGTTACTGCATTCCATGTCTCCCCAT GCTCGAGCCATTGGCGCCGTGAACACGCTAATTCCTATTCGGATGTTGGGAGACAAAGCCCTCGACGCCGATAAT TCCTCGTTGTACATGGAGAAGAGTCGCGCAGGGCCGATCAAGGCCTTGCACGGAGACAATACCGACTGGATCGGA ATTGGAAATTGTTTCCGAAGAGGCCTGTCACCCGCGAACGCCATCCGCCCCTCGTCCACTGGGCTAGTCATTGGC GCGGGTGGCATGGCGCGCGCTGCCATCTACTCCATGATCCACCTGGGCGTGCAGAATATCTTCGTCTACAATCGG ACCCTAGCGAATGCCGAAAAACTCGCCTACCATTATAATCGCCAGAATCTCCCTTCCCCGGGCCAGGCCGGGTCG GTGGCACGGCCTCAGGTGCACGTGCTGCAAAGCCTACAGGACAGCTGGCCTGCCAGTTACAAGCAACCGACCGTC GTCTGTTCATGTATCCCAACTCACAGCATCGGAGGGCAGCCGGCCCCGAACTTCGAAATGCCAGTGCAGTGGCTC GAAAGCCCGACGGGAGGCGTTGTCGTTGAGTTGGCGTATAAAACGCTCAATACCCCATTGATGAAACAAATCCGA GCACTTTCGCACCGTGGCTGGGTCGCTCTGGACGGACTAGATGTCCTCCCGGAGCAAGGTTTCGCCCAGTTCGAG CTGTTCACAGGTCGCCGGGCGCCGCGACGGCTCATGCGGACCGTAGTCTTGAAGGAATACGAGGGCGAAGAAGGT CAATACGACGAGCAGGCAATCCAAAGCAGGATTGAGAGTCTAGATGGACAACCCACCTGA |
Gene | >Ani_SJS100_1|g1644.t1 ATGTCAATCCTCGTGAATCCTCCCAAACGCAAGCTAGACGAGCTGGAAGGTCCGGTCGAGCATCAGAGCAGCAGG CGCTTGTCGCATCTCCCTTTCACCTCGAATACCCCCCATGCAGTAGATCCTACTCCCGGCAACGATGCGCCTCCA CGTCCCCGTGTCAATTCCGCTCCCCAGACGGAACACTCAGAGGCGTCGCCTTGGTTGAATGCTTCCTTGCGCGAG CTGAGCTCCAATCGTCAGTCGCCAGTTTCTTTTGACGGGCCTTTCCAGGCTCAAAGGAAATTCGCTCCCAATGCG TCCATTGTGTTGACCGGAATCCGCGGCACGGGAAAGTCCAGTCTAGCAGTCATTCTGGCGGCGACCTCGGGTAGG CGACTGATCGATGCAGACCGGTATTTTCAGCAGGTGACCGGTCGTACACGCGCTTCCTACAAGAAAGAGTTCGAT CTGGTTGAGTATCGCCAGCAGGAAGCCAGGGTGATGGAGTCCATGCTCTCCGAAAACCAAGAAGGCTGCGTCATT GCGTGCGGGCCTGGTTCCATGGAGCGCAGTGGGCAGACGCTGCTGAGGGAGTACGCGAAGACCCATCCAGTCATC TACATCCTCCGAGACCCCGAGAGCATCCAGTCTTACCTGAAAGCGTGGAACACAGACAAGGTTCGTCGTTTTCTG GAACTCTCGGGGCCCATCTATCGCGCCTGTTCCAACCTCGAATTCTTCAATGTCTCCGAGAAGGGCCTTGCGGAC CATCCGATTCCAAAAGACGGTCACCATGACTCGCAATTAGAATCGGAACTTGATCAACGAGTCCAAGCAATCACT CCTTTCCTTACCCTCAAACAATTACAGCGGGATTTTCTGTGTTTCATTGCGTTCGCAACGGGCGACACCACAGAC CTCAGCCGCCATAACTCATCCTTCCCTCTGTCGATGCAACCAGTTGAATCGCGCACCTATACTTATGCCGTAACC GTCCCTATCTCGTCCATGTTAGAACGTGATCTGGACATCGAGGAGCTAGAGTCGACCTCCGATGCGTTTGAGCTG AAGCTGGATGTGGCCGAGCCACCTTCCTCCCATCTCGGTTTGGACTCGAGCTTTGCCGATACCATTAGTCGGGCG TTCGCCAATGTCCGACGGAACACCGTCGTTCCATTAATATACCATGTGGAGAGTAATGTATGTCGTTATGGCTTG AGCGCAGAACACAAGGATCCCTCGCGGCGGTCGGATCCTGAGTATCTCAAATTAGTCCAGCACGGCCTACGATTA GCCCCGGAGTTTGTGACAGTAGATATGTCCTACGACGACAAGGTACTTTCACAGGTCATAGCATATAAAGGGTCC AGCAAAGTGATCGGGCACTTTGCTGCTACGCAGCCACCGGCGCGGGGCTGGGATGATGCACAGTATGTCGAGCTC TACGAGCGAGCCAAAAGGTTAGGATGCGACATGGTTCGGTTGACACAGCCGGCGGTGACAATTGACGACAACTTT GCCGTGCAACGCTTTCGCGACCATATCAAGTCCCTTCCTACCCCGCAACTGCCTGTCATCGCGTACAATGCGGGC CCATTGGGCCGGTTGTCATGCTGTTTCAACCCGATCTTGACCCCTGTCACCCATCCGTCAATGGTCGCCGAGATG CAGTCCAAAGGGTTGCCGTGTATCACCCTGCGTGAGGCACAGGAGGCTCTGTACGCCTCGTTCACATTGGACCCC TTGCACTTCTTTGTTTTCGGCGCCAACATCACCTACAGTCTGTCTCCTGCCATGCATAATGCCGCCTATAAGCGA TGCGGAATGCCGCACCATTACAAGCTCCACCAGTCGTCGACTCTGCGAGGCCTCAATGAGTTGGTGGAGAATCCG CATTTTGGTGGCACCAGTGTCAGCCTGCCGTTCAAAACCGAAGCCATTCCGTTACTGCATTCCATGTCTCCCCAT GCTCGAGCCATTGGCGCCGTGAACACGCTAATTCCTATTCGGATGTTGGGAGACAAAGCCCTCGACGCCGATAAT TCCTCGTTGTACATGGAGAAGAGTCGCGCAGGGCCGATCAAGGCCTTGCACGGAGACAATACCGACTGGATCGGA ATTGGAAATTGTTTCCGAAGAGGCCTGTCACCCGCGAACGCCATCCGCCCCTCGTCCACTGGGCTAGTCATTGGC GCGGGTGGCATGGCGCGCGCTGCCATCTACTCCATGATCCACCTGGGCGTGCAGAATATCTTCGTCTACAATCGG ACCCTAGCGAATGCCGAAAAACTCGCCTACCATTATAATCGCCAGAATCTCCCTTCCCCGGGCCAGGCCGGGTCG GTGGCACGGCCTCAGGTGCACGTGCTGCAAAGCCTACAGGACAGCTGGCCTGCCAGTTACAAGCAACCGACCGTC GTCTGTTCATGTATCCCAACTCACAGCATCGGAGGGCAGCCGGCCCCGAACTTCGAAATGCCAGTGCAGTGGCTC GAAAGCCCGACGGGAGGCGTTGTCGTTGAGGTTAGTCAGATACCACTGTAATTACACTCTGTAATCTGAATGAGA CTAACCAGTACACAGTTGGCGTATAAAACGCTCAATACCCCATTGATGAAACAAATCCGAGCACTTTCGCACCGT GGCTGGGTCGCTCTGGACGGACTAGATGTCCTCCCGGAGCAAGGTTTCGCCCAGTTCGAGCTGTTCACAGGTCGC CGGGCGCCGCGACGGCTCATGCGGACCGTAGTCTTGAAGGAATACGAGGGCGAAGAAGGTCAATACGACGAGCAG GCAATCCAAAGCAGGATTGAGAGTCTAGATGGACAACCCACCTGA |