Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1644.t1
Gene name
Locationscaffold_006:207964..210784
Strand-
Gene length (bp)2820
Transcript length (bp)2760
Coding sequence length (bp)2760
Protein length (aa) 920

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01487 DHquinase_I Type I 3-dehydroquinase 1.1E-37 336 567
PF08501 Shikimate_dh_N Shikimate dehydrogenase substrate binding domain 1.3E-21 580 660
PF01202 SKI Shikimate kinase 1.4E-20 108 218
PF18317 SDH_C Shikimate 5'-dehydrogenase C-terminal domain 9.8E-10 862 892
PF01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase 2.1E-06 721 765

GO

GO Term Description Terminal node
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity Yes
GO:0003855 3-dehydroquinate dehydratase activity Yes
GO:0003824 catalytic activity No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0016491 oxidoreductase activity No
GO:0016836 hydro-lyase activity No
GO:0016829 lyase activity No
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0016835 carbon-oxygen lyase activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1644.t1
MSILVNPPKRKLDELEGPVEHQSSRRLSHLPFTSNTPHAVDPTPGNDAPPRPRVNSAPQTEHSEASPWLNASLRE
LSSNRQSPVSFDGPFQAQRKFAPNASIVLTGIRGTGKSSLAVILAATSGRRLIDADRYFQQVTGRTRASYKKEFD
LVEYRQQEARVMESMLSENQEGCVIACGPGSMERSGQTLLREYAKTHPVIYILRDPESIQSYLKAWNTDKVRRFL
ELSGPIYRACSNLEFFNVSEKGLADHPIPKDGHHDSQLESELDQRVQAITPFLTLKQLQRDFLCFIAFATGDTTD
LSRHNSSFPLSMQPVESRTYTYAVTVPISSMLERDLDIEELESTSDAFELKLDVAEPPSSHLGLDSSFADTISRA
FANVRRNTVVPLIYHVESNVCRYGLSAEHKDPSRRSDPEYLKLVQHGLRLAPEFVTVDMSYDDKVLSQVIAYKGS
SKVIGHFAATQPPARGWDDAQYVELYERAKRLGCDMVRLTQPAVTIDDNFAVQRFRDHIKSLPTPQLPVIAYNAG
PLGRLSCCFNPILTPVTHPSMVAEMQSKGLPCITLREAQEALYASFTLDPLHFFVFGANITYSLSPAMHNAAYKR
CGMPHHYKLHQSSTLRGLNELVENPHFGGTSVSLPFKTEAIPLLHSMSPHARAIGAVNTLIPIRMLGDKALDADN
SSLYMEKSRAGPIKALHGDNTDWIGIGNCFRRGLSPANAIRPSSTGLVIGAGGMARAAIYSMIHLGVQNIFVYNR
TLANAEKLAYHYNRQNLPSPGQAGSVARPQVHVLQSLQDSWPASYKQPTVVCSCIPTHSIGGQPAPNFEMPVQWL
ESPTGGVVVELAYKTLNTPLMKQIRALSHRGWVALDGLDVLPEQGFAQFELFTGRRAPRRLMRTVVLKEYEGEEG
QYDEQAIQSRIESLDGQPT*
Coding >Ani_SJS100_1|g1644.t1
ATGTCAATCCTCGTGAATCCTCCCAAACGCAAGCTAGACGAGCTGGAAGGTCCGGTCGAGCATCAGAGCAGCAGG
CGCTTGTCGCATCTCCCTTTCACCTCGAATACCCCCCATGCAGTAGATCCTACTCCCGGCAACGATGCGCCTCCA
CGTCCCCGTGTCAATTCCGCTCCCCAGACGGAACACTCAGAGGCGTCGCCTTGGTTGAATGCTTCCTTGCGCGAG
CTGAGCTCCAATCGTCAGTCGCCAGTTTCTTTTGACGGGCCTTTCCAGGCTCAAAGGAAATTCGCTCCCAATGCG
TCCATTGTGTTGACCGGAATCCGCGGCACGGGAAAGTCCAGTCTAGCAGTCATTCTGGCGGCGACCTCGGGTAGG
CGACTGATCGATGCAGACCGGTATTTTCAGCAGGTGACCGGTCGTACACGCGCTTCCTACAAGAAAGAGTTCGAT
CTGGTTGAGTATCGCCAGCAGGAAGCCAGGGTGATGGAGTCCATGCTCTCCGAAAACCAAGAAGGCTGCGTCATT
GCGTGCGGGCCTGGTTCCATGGAGCGCAGTGGGCAGACGCTGCTGAGGGAGTACGCGAAGACCCATCCAGTCATC
TACATCCTCCGAGACCCCGAGAGCATCCAGTCTTACCTGAAAGCGTGGAACACAGACAAGGTTCGTCGTTTTCTG
GAACTCTCGGGGCCCATCTATCGCGCCTGTTCCAACCTCGAATTCTTCAATGTCTCCGAGAAGGGCCTTGCGGAC
CATCCGATTCCAAAAGACGGTCACCATGACTCGCAATTAGAATCGGAACTTGATCAACGAGTCCAAGCAATCACT
CCTTTCCTTACCCTCAAACAATTACAGCGGGATTTTCTGTGTTTCATTGCGTTCGCAACGGGCGACACCACAGAC
CTCAGCCGCCATAACTCATCCTTCCCTCTGTCGATGCAACCAGTTGAATCGCGCACCTATACTTATGCCGTAACC
GTCCCTATCTCGTCCATGTTAGAACGTGATCTGGACATCGAGGAGCTAGAGTCGACCTCCGATGCGTTTGAGCTG
AAGCTGGATGTGGCCGAGCCACCTTCCTCCCATCTCGGTTTGGACTCGAGCTTTGCCGATACCATTAGTCGGGCG
TTCGCCAATGTCCGACGGAACACCGTCGTTCCATTAATATACCATGTGGAGAGTAATGTATGTCGTTATGGCTTG
AGCGCAGAACACAAGGATCCCTCGCGGCGGTCGGATCCTGAGTATCTCAAATTAGTCCAGCACGGCCTACGATTA
GCCCCGGAGTTTGTGACAGTAGATATGTCCTACGACGACAAGGTACTTTCACAGGTCATAGCATATAAAGGGTCC
AGCAAAGTGATCGGGCACTTTGCTGCTACGCAGCCACCGGCGCGGGGCTGGGATGATGCACAGTATGTCGAGCTC
TACGAGCGAGCCAAAAGGTTAGGATGCGACATGGTTCGGTTGACACAGCCGGCGGTGACAATTGACGACAACTTT
GCCGTGCAACGCTTTCGCGACCATATCAAGTCCCTTCCTACCCCGCAACTGCCTGTCATCGCGTACAATGCGGGC
CCATTGGGCCGGTTGTCATGCTGTTTCAACCCGATCTTGACCCCTGTCACCCATCCGTCAATGGTCGCCGAGATG
CAGTCCAAAGGGTTGCCGTGTATCACCCTGCGTGAGGCACAGGAGGCTCTGTACGCCTCGTTCACATTGGACCCC
TTGCACTTCTTTGTTTTCGGCGCCAACATCACCTACAGTCTGTCTCCTGCCATGCATAATGCCGCCTATAAGCGA
TGCGGAATGCCGCACCATTACAAGCTCCACCAGTCGTCGACTCTGCGAGGCCTCAATGAGTTGGTGGAGAATCCG
CATTTTGGTGGCACCAGTGTCAGCCTGCCGTTCAAAACCGAAGCCATTCCGTTACTGCATTCCATGTCTCCCCAT
GCTCGAGCCATTGGCGCCGTGAACACGCTAATTCCTATTCGGATGTTGGGAGACAAAGCCCTCGACGCCGATAAT
TCCTCGTTGTACATGGAGAAGAGTCGCGCAGGGCCGATCAAGGCCTTGCACGGAGACAATACCGACTGGATCGGA
ATTGGAAATTGTTTCCGAAGAGGCCTGTCACCCGCGAACGCCATCCGCCCCTCGTCCACTGGGCTAGTCATTGGC
GCGGGTGGCATGGCGCGCGCTGCCATCTACTCCATGATCCACCTGGGCGTGCAGAATATCTTCGTCTACAATCGG
ACCCTAGCGAATGCCGAAAAACTCGCCTACCATTATAATCGCCAGAATCTCCCTTCCCCGGGCCAGGCCGGGTCG
GTGGCACGGCCTCAGGTGCACGTGCTGCAAAGCCTACAGGACAGCTGGCCTGCCAGTTACAAGCAACCGACCGTC
GTCTGTTCATGTATCCCAACTCACAGCATCGGAGGGCAGCCGGCCCCGAACTTCGAAATGCCAGTGCAGTGGCTC
GAAAGCCCGACGGGAGGCGTTGTCGTTGAGTTGGCGTATAAAACGCTCAATACCCCATTGATGAAACAAATCCGA
GCACTTTCGCACCGTGGCTGGGTCGCTCTGGACGGACTAGATGTCCTCCCGGAGCAAGGTTTCGCCCAGTTCGAG
CTGTTCACAGGTCGCCGGGCGCCGCGACGGCTCATGCGGACCGTAGTCTTGAAGGAATACGAGGGCGAAGAAGGT
CAATACGACGAGCAGGCAATCCAAAGCAGGATTGAGAGTCTAGATGGACAACCCACCTGA
Transcript >Ani_SJS100_1|g1644.t1
ATGTCAATCCTCGTGAATCCTCCCAAACGCAAGCTAGACGAGCTGGAAGGTCCGGTCGAGCATCAGAGCAGCAGG
CGCTTGTCGCATCTCCCTTTCACCTCGAATACCCCCCATGCAGTAGATCCTACTCCCGGCAACGATGCGCCTCCA
CGTCCCCGTGTCAATTCCGCTCCCCAGACGGAACACTCAGAGGCGTCGCCTTGGTTGAATGCTTCCTTGCGCGAG
CTGAGCTCCAATCGTCAGTCGCCAGTTTCTTTTGACGGGCCTTTCCAGGCTCAAAGGAAATTCGCTCCCAATGCG
TCCATTGTGTTGACCGGAATCCGCGGCACGGGAAAGTCCAGTCTAGCAGTCATTCTGGCGGCGACCTCGGGTAGG
CGACTGATCGATGCAGACCGGTATTTTCAGCAGGTGACCGGTCGTACACGCGCTTCCTACAAGAAAGAGTTCGAT
CTGGTTGAGTATCGCCAGCAGGAAGCCAGGGTGATGGAGTCCATGCTCTCCGAAAACCAAGAAGGCTGCGTCATT
GCGTGCGGGCCTGGTTCCATGGAGCGCAGTGGGCAGACGCTGCTGAGGGAGTACGCGAAGACCCATCCAGTCATC
TACATCCTCCGAGACCCCGAGAGCATCCAGTCTTACCTGAAAGCGTGGAACACAGACAAGGTTCGTCGTTTTCTG
GAACTCTCGGGGCCCATCTATCGCGCCTGTTCCAACCTCGAATTCTTCAATGTCTCCGAGAAGGGCCTTGCGGAC
CATCCGATTCCAAAAGACGGTCACCATGACTCGCAATTAGAATCGGAACTTGATCAACGAGTCCAAGCAATCACT
CCTTTCCTTACCCTCAAACAATTACAGCGGGATTTTCTGTGTTTCATTGCGTTCGCAACGGGCGACACCACAGAC
CTCAGCCGCCATAACTCATCCTTCCCTCTGTCGATGCAACCAGTTGAATCGCGCACCTATACTTATGCCGTAACC
GTCCCTATCTCGTCCATGTTAGAACGTGATCTGGACATCGAGGAGCTAGAGTCGACCTCCGATGCGTTTGAGCTG
AAGCTGGATGTGGCCGAGCCACCTTCCTCCCATCTCGGTTTGGACTCGAGCTTTGCCGATACCATTAGTCGGGCG
TTCGCCAATGTCCGACGGAACACCGTCGTTCCATTAATATACCATGTGGAGAGTAATGTATGTCGTTATGGCTTG
AGCGCAGAACACAAGGATCCCTCGCGGCGGTCGGATCCTGAGTATCTCAAATTAGTCCAGCACGGCCTACGATTA
GCCCCGGAGTTTGTGACAGTAGATATGTCCTACGACGACAAGGTACTTTCACAGGTCATAGCATATAAAGGGTCC
AGCAAAGTGATCGGGCACTTTGCTGCTACGCAGCCACCGGCGCGGGGCTGGGATGATGCACAGTATGTCGAGCTC
TACGAGCGAGCCAAAAGGTTAGGATGCGACATGGTTCGGTTGACACAGCCGGCGGTGACAATTGACGACAACTTT
GCCGTGCAACGCTTTCGCGACCATATCAAGTCCCTTCCTACCCCGCAACTGCCTGTCATCGCGTACAATGCGGGC
CCATTGGGCCGGTTGTCATGCTGTTTCAACCCGATCTTGACCCCTGTCACCCATCCGTCAATGGTCGCCGAGATG
CAGTCCAAAGGGTTGCCGTGTATCACCCTGCGTGAGGCACAGGAGGCTCTGTACGCCTCGTTCACATTGGACCCC
TTGCACTTCTTTGTTTTCGGCGCCAACATCACCTACAGTCTGTCTCCTGCCATGCATAATGCCGCCTATAAGCGA
TGCGGAATGCCGCACCATTACAAGCTCCACCAGTCGTCGACTCTGCGAGGCCTCAATGAGTTGGTGGAGAATCCG
CATTTTGGTGGCACCAGTGTCAGCCTGCCGTTCAAAACCGAAGCCATTCCGTTACTGCATTCCATGTCTCCCCAT
GCTCGAGCCATTGGCGCCGTGAACACGCTAATTCCTATTCGGATGTTGGGAGACAAAGCCCTCGACGCCGATAAT
TCCTCGTTGTACATGGAGAAGAGTCGCGCAGGGCCGATCAAGGCCTTGCACGGAGACAATACCGACTGGATCGGA
ATTGGAAATTGTTTCCGAAGAGGCCTGTCACCCGCGAACGCCATCCGCCCCTCGTCCACTGGGCTAGTCATTGGC
GCGGGTGGCATGGCGCGCGCTGCCATCTACTCCATGATCCACCTGGGCGTGCAGAATATCTTCGTCTACAATCGG
ACCCTAGCGAATGCCGAAAAACTCGCCTACCATTATAATCGCCAGAATCTCCCTTCCCCGGGCCAGGCCGGGTCG
GTGGCACGGCCTCAGGTGCACGTGCTGCAAAGCCTACAGGACAGCTGGCCTGCCAGTTACAAGCAACCGACCGTC
GTCTGTTCATGTATCCCAACTCACAGCATCGGAGGGCAGCCGGCCCCGAACTTCGAAATGCCAGTGCAGTGGCTC
GAAAGCCCGACGGGAGGCGTTGTCGTTGAGTTGGCGTATAAAACGCTCAATACCCCATTGATGAAACAAATCCGA
GCACTTTCGCACCGTGGCTGGGTCGCTCTGGACGGACTAGATGTCCTCCCGGAGCAAGGTTTCGCCCAGTTCGAG
CTGTTCACAGGTCGCCGGGCGCCGCGACGGCTCATGCGGACCGTAGTCTTGAAGGAATACGAGGGCGAAGAAGGT
CAATACGACGAGCAGGCAATCCAAAGCAGGATTGAGAGTCTAGATGGACAACCCACCTGA
Gene >Ani_SJS100_1|g1644.t1
ATGTCAATCCTCGTGAATCCTCCCAAACGCAAGCTAGACGAGCTGGAAGGTCCGGTCGAGCATCAGAGCAGCAGG
CGCTTGTCGCATCTCCCTTTCACCTCGAATACCCCCCATGCAGTAGATCCTACTCCCGGCAACGATGCGCCTCCA
CGTCCCCGTGTCAATTCCGCTCCCCAGACGGAACACTCAGAGGCGTCGCCTTGGTTGAATGCTTCCTTGCGCGAG
CTGAGCTCCAATCGTCAGTCGCCAGTTTCTTTTGACGGGCCTTTCCAGGCTCAAAGGAAATTCGCTCCCAATGCG
TCCATTGTGTTGACCGGAATCCGCGGCACGGGAAAGTCCAGTCTAGCAGTCATTCTGGCGGCGACCTCGGGTAGG
CGACTGATCGATGCAGACCGGTATTTTCAGCAGGTGACCGGTCGTACACGCGCTTCCTACAAGAAAGAGTTCGAT
CTGGTTGAGTATCGCCAGCAGGAAGCCAGGGTGATGGAGTCCATGCTCTCCGAAAACCAAGAAGGCTGCGTCATT
GCGTGCGGGCCTGGTTCCATGGAGCGCAGTGGGCAGACGCTGCTGAGGGAGTACGCGAAGACCCATCCAGTCATC
TACATCCTCCGAGACCCCGAGAGCATCCAGTCTTACCTGAAAGCGTGGAACACAGACAAGGTTCGTCGTTTTCTG
GAACTCTCGGGGCCCATCTATCGCGCCTGTTCCAACCTCGAATTCTTCAATGTCTCCGAGAAGGGCCTTGCGGAC
CATCCGATTCCAAAAGACGGTCACCATGACTCGCAATTAGAATCGGAACTTGATCAACGAGTCCAAGCAATCACT
CCTTTCCTTACCCTCAAACAATTACAGCGGGATTTTCTGTGTTTCATTGCGTTCGCAACGGGCGACACCACAGAC
CTCAGCCGCCATAACTCATCCTTCCCTCTGTCGATGCAACCAGTTGAATCGCGCACCTATACTTATGCCGTAACC
GTCCCTATCTCGTCCATGTTAGAACGTGATCTGGACATCGAGGAGCTAGAGTCGACCTCCGATGCGTTTGAGCTG
AAGCTGGATGTGGCCGAGCCACCTTCCTCCCATCTCGGTTTGGACTCGAGCTTTGCCGATACCATTAGTCGGGCG
TTCGCCAATGTCCGACGGAACACCGTCGTTCCATTAATATACCATGTGGAGAGTAATGTATGTCGTTATGGCTTG
AGCGCAGAACACAAGGATCCCTCGCGGCGGTCGGATCCTGAGTATCTCAAATTAGTCCAGCACGGCCTACGATTA
GCCCCGGAGTTTGTGACAGTAGATATGTCCTACGACGACAAGGTACTTTCACAGGTCATAGCATATAAAGGGTCC
AGCAAAGTGATCGGGCACTTTGCTGCTACGCAGCCACCGGCGCGGGGCTGGGATGATGCACAGTATGTCGAGCTC
TACGAGCGAGCCAAAAGGTTAGGATGCGACATGGTTCGGTTGACACAGCCGGCGGTGACAATTGACGACAACTTT
GCCGTGCAACGCTTTCGCGACCATATCAAGTCCCTTCCTACCCCGCAACTGCCTGTCATCGCGTACAATGCGGGC
CCATTGGGCCGGTTGTCATGCTGTTTCAACCCGATCTTGACCCCTGTCACCCATCCGTCAATGGTCGCCGAGATG
CAGTCCAAAGGGTTGCCGTGTATCACCCTGCGTGAGGCACAGGAGGCTCTGTACGCCTCGTTCACATTGGACCCC
TTGCACTTCTTTGTTTTCGGCGCCAACATCACCTACAGTCTGTCTCCTGCCATGCATAATGCCGCCTATAAGCGA
TGCGGAATGCCGCACCATTACAAGCTCCACCAGTCGTCGACTCTGCGAGGCCTCAATGAGTTGGTGGAGAATCCG
CATTTTGGTGGCACCAGTGTCAGCCTGCCGTTCAAAACCGAAGCCATTCCGTTACTGCATTCCATGTCTCCCCAT
GCTCGAGCCATTGGCGCCGTGAACACGCTAATTCCTATTCGGATGTTGGGAGACAAAGCCCTCGACGCCGATAAT
TCCTCGTTGTACATGGAGAAGAGTCGCGCAGGGCCGATCAAGGCCTTGCACGGAGACAATACCGACTGGATCGGA
ATTGGAAATTGTTTCCGAAGAGGCCTGTCACCCGCGAACGCCATCCGCCCCTCGTCCACTGGGCTAGTCATTGGC
GCGGGTGGCATGGCGCGCGCTGCCATCTACTCCATGATCCACCTGGGCGTGCAGAATATCTTCGTCTACAATCGG
ACCCTAGCGAATGCCGAAAAACTCGCCTACCATTATAATCGCCAGAATCTCCCTTCCCCGGGCCAGGCCGGGTCG
GTGGCACGGCCTCAGGTGCACGTGCTGCAAAGCCTACAGGACAGCTGGCCTGCCAGTTACAAGCAACCGACCGTC
GTCTGTTCATGTATCCCAACTCACAGCATCGGAGGGCAGCCGGCCCCGAACTTCGAAATGCCAGTGCAGTGGCTC
GAAAGCCCGACGGGAGGCGTTGTCGTTGAGGTTAGTCAGATACCACTGTAATTACACTCTGTAATCTGAATGAGA
CTAACCAGTACACAGTTGGCGTATAAAACGCTCAATACCCCATTGATGAAACAAATCCGAGCACTTTCGCACCGT
GGCTGGGTCGCTCTGGACGGACTAGATGTCCTCCCGGAGCAAGGTTTCGCCCAGTTCGAGCTGTTCACAGGTCGC
CGGGCGCCGCGACGGCTCATGCGGACCGTAGTCTTGAAGGAATACGAGGGCGAAGAAGGTCAATACGACGAGCAG
GCAATCCAAAGCAGGATTGAGAGTCTAGATGGACAACCCACCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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