Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1636.t1
Gene name
Locationscaffold_006:189714..190984
Strand+
Gene length (bp)1270
Transcript length (bp)912
Coding sequence length (bp)912
Protein length (aa) 304

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02077 SURF4 SURF4 family 3.9E-94 39 303

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

Domain # Start End Length
1 96 118 22
2 125 144 19
3 149 168 19
4 188 207 19
5 211 233 22
6 240 259 19
7 274 296 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1636.t1
MAQIRGTAGYNFGHQNPFGGPGRVEATSDPSPLDAVREQTSKIEDWLDTMSDPVKPYLPAIGRFLIVVTFIEDSL
RMITQWNDQLLYLRDYRKIPWGITHTFLIVNMIAMAACSFMVIARRHTEYAVGGLLAVVIVQGLGYGLIFDLNFF
LRNLSVVGGLLMVLSDSWVRKKFVPAGLPQLDEKDRKMYVQFAGRVLLIFLFIGFVFSGQWSLWRIIVSLFGFVA
CVMVIVGFKAKWSAIMLVVLLSVFNVLVNNFWTLHPHHPHKDFAKYDFFQILSIVGGLLLLVNMGPGQLSMDEKK
KVY*
Coding >Ani_SJS100_1|g1636.t1
ATGGCACAAATCCGTGGCACTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTGGGGGTCCTGGTCGTGTAGAG
GCTACGAGCGATCCGAGTCCCCTGGATGCTGTTCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGACACCATG
TCCGACCCTGTCAAGCCGTATCTGCCAGCCATTGGTCGCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTCTA
CGCATGATTACCCAATGGAACGATCAGCTCCTGTACCTTCGTGATTACCGGAAGATTCCCTGGGGAATCACGCAT
ACCTTCCTTATCGTCAACATGATCGCAATGGCGGCTTGCTCGTTCATGGTCATTGCTCGTAGACACACGGAGTAC
GCCGTTGGCGGTCTCTTGGCTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGATCTTCGACCTCAACTTCTTC
CTCCGCAACCTGAGTGTTGTCGGTGGCTTGCTCATGGTTCTCTCTGACTCGTGGGTGCGCAAGAAGTTCGTCCCC
GCAGGTCTTCCCCAGCTCGATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTGGTCGTGTGCTGCTGATCTTC
CTCTTCATCGGATTCGTCTTCTCCGGCCAGTGGAGTCTCTGGCGCATTATTGTCAGCCTGTTCGGCTTCGTCGCG
TGTGTCATGGTCATTGTTGGATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCGTGTTGTTGAGTGTGTTCAAC
GTCCTGGTCAACAACTTCTGGACTCTCCACCCGCACCACCCTCACAAGGACTTCGCCAAGTACGACTTCTTCCAG
ATCCTGTCCATTGTCGGAGGCCTTCTCCTCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGGACGAGAAGAAG
AAGGTCTACTAA
Transcript >Ani_SJS100_1|g1636.t1
ATGGCACAAATCCGTGGCACTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTGGGGGTCCTGGTCGTGTAGAG
GCTACGAGCGATCCGAGTCCCCTGGATGCTGTTCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGACACCATG
TCCGACCCTGTCAAGCCGTATCTGCCAGCCATTGGTCGCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTCTA
CGCATGATTACCCAATGGAACGATCAGCTCCTGTACCTTCGTGATTACCGGAAGATTCCCTGGGGAATCACGCAT
ACCTTCCTTATCGTCAACATGATCGCAATGGCGGCTTGCTCGTTCATGGTCATTGCTCGTAGACACACGGAGTAC
GCCGTTGGCGGTCTCTTGGCTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGATCTTCGACCTCAACTTCTTC
CTCCGCAACCTGAGTGTTGTCGGTGGCTTGCTCATGGTTCTCTCTGACTCGTGGGTGCGCAAGAAGTTCGTCCCC
GCAGGTCTTCCCCAGCTCGATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTGGTCGTGTGCTGCTGATCTTC
CTCTTCATCGGATTCGTCTTCTCCGGCCAGTGGAGTCTCTGGCGCATTATTGTCAGCCTGTTCGGCTTCGTCGCG
TGTGTCATGGTCATTGTTGGATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCGTGTTGTTGAGTGTGTTCAAC
GTCCTGGTCAACAACTTCTGGACTCTCCACCCGCACCACCCTCACAAGGACTTCGCCAAGTACGACTTCTTCCAG
ATCCTGTCCATTGTCGGAGGCCTTCTCCTCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGGACGAGAAGAAG
AAGGTCTACTAA
Gene >Ani_SJS100_1|g1636.t1
ATGGCACAAATCCGTGGCACTGCAGGCTACAATTTCGGCCACCAGAACCCCTTTGGGGGTCCTGGTCGTGTAGAG
GCTACGAGCGATCCGAGTCCCCTGGATGCTGTTCGCGAACAGACGAGCAAAATTGAGGACTGGCTGGACACCATG
TCCGACCCTGTCAAGCCGTATGTGAGCCCTCAGACACCTCTGACTCTCATTACTCTGGTTCAGCCTCCGTGCTGA
AGAGGCACCTTCGATTGCTCGCATGCGGGAAAGGACTTGTCACTGACACCGTGGCTTCTTCGCTGTTCAGGTATC
TGCCAGCCATTGGTCGCTTTCTGATCGTTGTCACCTTCATTGAGGACAGTCTACGCATGATTACCCAATGGAACG
ATCAGCTCCTGTACCTTCGTGATTACCGGAAGAGTAAGCATGGCTTTGGTCCCGTCCCTCCTATATCCGGTCTCA
CCCGCCGTGGGGCCGGATCGCAGATCGACTCTAACTTGGGCTTCGTCGCATAACAGTTCCCTGGGGAATCACGCA
TACCTTCCTTATCGTCAACATGATCGCAATGGCGGCTTGCTCGTTCATGGTCATTGCTCGTAGACACACGGAGTA
CGCCGTTGGCGGTCTCTTGGCTGTCGTCATCGTTCAGGGTCTCGGTTACGGATTGATCTTCGACCTCAACTTCTT
CCTCCGCAACCTGAGTGTTGTCGGTGGCTTGCTCATGGTTCTCTCTGACTCGTGGGTGCGCAAGAAGTTCGTCCC
CGCAGGTCTTCCCCAGCTCGATGAGAAGGACCGCAAGATGTACGTCCAGTTCGCTGGTCGTGTGCTGCTGATCTT
CCTCTTCATCGGATTCGTCTTCTCCGGCCAGTGGAGTCTCTGGCGCATTATTGTCAGCCTGTTCGGCTTCGTCGC
GTGTGTCATGGTCATTGTTGGATTCAAGGCCAAGTGGAGTGCGATCATGCTGGTCGTGTTGTTGAGTGTGTTCAA
CGTCCTGGTCAACAACTTCTGGACTGTATGTTTGCCCCATGACAAGAAACGTTGCGCTGCGCAGTAACTGACACT
ACTTTAGCTCCACCCGCACCACCCTCACAAGGACTTCGCCAAGTACGACTTCTTCCAGATCCTGTCCATTGTGTA
AGTAGCCCTGAAGTTCACCATATCCCCAAGAATTGCAAAGCAACTCTAGCTAACAATATGCGCTCACTACAGCGG
AGGCCTTCTCCTCCTGGTCAACATGGGTCCCGGCCAATTGAGTATGGACGAGAAGAAGAAGGTCTACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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