Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1622.t1
Gene name
Locationscaffold_006:151260..152556
Strand+
Gene length (bp)1296
Transcript length (bp)1296
Coding sequence length (bp)1296
Protein length (aa) 432

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04193 PQ-loop PQ loop repeat 1.3E-17 42 99
PF04193 PQ-loop PQ loop repeat 4.7E-18 258 315

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 35 57 22
2 74 96 22
3 101 123 22
4 288 310 22
5 344 366 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1622.t1
MPPPLLQQIHAVLPQHCEPTTPFLAAVSSYLHICLPTPLAFVSSVLGTLSIVSWLFAQLPQIYKNYQIQSTAGLS
LFFLVEWCLGDTSNLLGALLTRQAGWQVIVAAYYVCVDVTLVFQYFWYTHYRGQYDGYGALAHSEYDRPPGSVLE
GVSFSDNSSSDHAPRSTESPLPSNPKDMKDIKEPAVPSSNGQSPSYSNEKLSSSKRSITRSSSGPSLPIGSPRTL
LLASMLCAVVANAAPTEQQTTSESSQKTLEILGRIISWMSTFLYLGSRPPQLYKNYCRKSTSGLSPLLFMAAFCG
NFFYSASLLTNPNAWYDFPAYGGGGWADADGNDRLEWVTRATPFFLGAFGVLAFDGLMGVQFLMYGTRDDESIMQ
VEDPKDGRSRWTRVRGWMRGWIPSVSPARRLRSDATVSSEENQSLLQNERERYGTV*
Coding >Ani_SJS100_1|g1622.t1
ATGCCTCCTCCTCTCTTACAACAGATTCATGCAGTGCTCCCGCAACACTGTGAACCGACAACCCCATTCCTCGCG
GCCGTGTCCTCCTACCTCCACATCTGCCTCCCCACACCGTTAGCCTTCGTCTCCTCCGTTCTCGGAACCCTCAGC
ATCGTGTCATGGCTCTTCGCTCAGCTCCCACAAATATACAAGAATTATCAAATCCAGTCGACGGCTGGCTTGTCA
CTGTTTTTCCTCGTGGAGTGGTGTCTGGGTGATACTAGTAACCTCCTGGGTGCCCTGCTCACCCGGCAGGCAGGC
TGGCAGGTTATCGTGGCTGCTTACTATGTCTGCGTTGACGTGACTCTGGTCTTCCAATACTTTTGGTACACACAC
TATAGGGGACAGTATGATGGCTACGGTGCCCTTGCTCATTCGGAATATGATCGGCCTCCGGGTAGTGTCTTGGAA
GGCGTCTCATTCTCCGACAACAGCTCTTCCGATCACGCCCCACGTTCTACAGAGTCCCCCTTGCCGTCAAATCCC
AAAGACATGAAAGATATCAAGGAACCTGCGGTGCCGAGTTCCAACGGGCAATCTCCTTCTTACTCCAATGAGAAA
CTGAGCTCCTCTAAGCGCTCAATCACCCGATCCAGCAGTGGCCCCAGCCTCCCAATTGGGTCCCCACGCACTCTG
CTGCTTGCATCAATGCTGTGCGCCGTCGTGGCCAATGCTGCTCCGACAGAGCAGCAAACAACATCCGAATCCTCA
CAGAAGACTCTCGAGATCCTCGGCCGGATCATCTCCTGGATGTCAACATTCCTCTACCTCGGCTCGCGGCCACCC
CAACTATACAAGAACTACTGCCGGAAGAGCACATCAGGCCTCTCCCCATTACTATTCATGGCTGCCTTTTGCGGG
AACTTCTTCTACTCCGCCTCCCTTCTTACCAATCCTAATGCTTGGTATGATTTCCCTGCCTATGGGGGTGGTGGC
TGGGCCGATGCAGATGGCAACGACCGCCTTGAATGGGTTACCCGAGCTACTCCCTTCTTCCTTGGCGCCTTCGGT
GTGCTAGCCTTTGACGGACTCATGGGCGTGCAGTTCCTCATGTATGGAACCCGGGATGACGAGTCTATCATGCAA
GTTGAAGACCCCAAAGACGGACGTAGTCGTTGGACCCGCGTTCGGGGCTGGATGAGGGGCTGGATCCCTTCAGTG
TCCCCTGCGCGACGGCTTCGCTCTGACGCCACAGTCTCTTCAGAGGAGAACCAATCTCTCCTGCAGAATGAGCGG
GAGAGATACGGTACAGTTTGA
Transcript >Ani_SJS100_1|g1622.t1
ATGCCTCCTCCTCTCTTACAACAGATTCATGCAGTGCTCCCGCAACACTGTGAACCGACAACCCCATTCCTCGCG
GCCGTGTCCTCCTACCTCCACATCTGCCTCCCCACACCGTTAGCCTTCGTCTCCTCCGTTCTCGGAACCCTCAGC
ATCGTGTCATGGCTCTTCGCTCAGCTCCCACAAATATACAAGAATTATCAAATCCAGTCGACGGCTGGCTTGTCA
CTGTTTTTCCTCGTGGAGTGGTGTCTGGGTGATACTAGTAACCTCCTGGGTGCCCTGCTCACCCGGCAGGCAGGC
TGGCAGGTTATCGTGGCTGCTTACTATGTCTGCGTTGACGTGACTCTGGTCTTCCAATACTTTTGGTACACACAC
TATAGGGGACAGTATGATGGCTACGGTGCCCTTGCTCATTCGGAATATGATCGGCCTCCGGGTAGTGTCTTGGAA
GGCGTCTCATTCTCCGACAACAGCTCTTCCGATCACGCCCCACGTTCTACAGAGTCCCCCTTGCCGTCAAATCCC
AAAGACATGAAAGATATCAAGGAACCTGCGGTGCCGAGTTCCAACGGGCAATCTCCTTCTTACTCCAATGAGAAA
CTGAGCTCCTCTAAGCGCTCAATCACCCGATCCAGCAGTGGCCCCAGCCTCCCAATTGGGTCCCCACGCACTCTG
CTGCTTGCATCAATGCTGTGCGCCGTCGTGGCCAATGCTGCTCCGACAGAGCAGCAAACAACATCCGAATCCTCA
CAGAAGACTCTCGAGATCCTCGGCCGGATCATCTCCTGGATGTCAACATTCCTCTACCTCGGCTCGCGGCCACCC
CAACTATACAAGAACTACTGCCGGAAGAGCACATCAGGCCTCTCCCCATTACTATTCATGGCTGCCTTTTGCGGG
AACTTCTTCTACTCCGCCTCCCTTCTTACCAATCCTAATGCTTGGTATGATTTCCCTGCCTATGGGGGTGGTGGC
TGGGCCGATGCAGATGGCAACGACCGCCTTGAATGGGTTACCCGAGCTACTCCCTTCTTCCTTGGCGCCTTCGGT
GTGCTAGCCTTTGACGGACTCATGGGCGTGCAGTTCCTCATGTATGGAACCCGGGATGACGAGTCTATCATGCAA
GTTGAAGACCCCAAAGACGGACGTAGTCGTTGGACCCGCGTTCGGGGCTGGATGAGGGGCTGGATCCCTTCAGTG
TCCCCTGCGCGACGGCTTCGCTCTGACGCCACAGTCTCTTCAGAGGAGAACCAATCTCTCCTGCAGAATGAGCGG
GAGAGATACGGTACAGTTTGA
Gene >Ani_SJS100_1|g1622.t1
ATGCCTCCTCCTCTCTTACAACAGATTCATGCAGTGCTCCCGCAACACTGTGAACCGACAACCCCATTCCTCGCG
GCCGTGTCCTCCTACCTCCACATCTGCCTCCCCACACCGTTAGCCTTCGTCTCCTCCGTTCTCGGAACCCTCAGC
ATCGTGTCATGGCTCTTCGCTCAGCTCCCACAAATATACAAGAATTATCAAATCCAGTCGACGGCTGGCTTGTCA
CTGTTTTTCCTCGTGGAGTGGTGTCTGGGTGATACTAGTAACCTCCTGGGTGCCCTGCTCACCCGGCAGGCAGGC
TGGCAGGTTATCGTGGCTGCTTACTATGTCTGCGTTGACGTGACTCTGGTCTTCCAATACTTTTGGTACACACAC
TATAGGGGACAGTATGATGGCTACGGTGCCCTTGCTCATTCGGAATATGATCGGCCTCCGGGTAGTGTCTTGGAA
GGCGTCTCATTCTCCGACAACAGCTCTTCCGATCACGCCCCACGTTCTACAGAGTCCCCCTTGCCGTCAAATCCC
AAAGACATGAAAGATATCAAGGAACCTGCGGTGCCGAGTTCCAACGGGCAATCTCCTTCTTACTCCAATGAGAAA
CTGAGCTCCTCTAAGCGCTCAATCACCCGATCCAGCAGTGGCCCCAGCCTCCCAATTGGGTCCCCACGCACTCTG
CTGCTTGCATCAATGCTGTGCGCCGTCGTGGCCAATGCTGCTCCGACAGAGCAGCAAACAACATCCGAATCCTCA
CAGAAGACTCTCGAGATCCTCGGCCGGATCATCTCCTGGATGTCAACATTCCTCTACCTCGGCTCGCGGCCACCC
CAACTATACAAGAACTACTGCCGGAAGAGCACATCAGGCCTCTCCCCATTACTATTCATGGCTGCCTTTTGCGGG
AACTTCTTCTACTCCGCCTCCCTTCTTACCAATCCTAATGCTTGGTATGATTTCCCTGCCTATGGGGGTGGTGGC
TGGGCCGATGCAGATGGCAACGACCGCCTTGAATGGGTTACCCGAGCTACTCCCTTCTTCCTTGGCGCCTTCGGT
GTGCTAGCCTTTGACGGACTCATGGGCGTGCAGTTCCTCATGTATGGAACCCGGGATGACGAGTCTATCATGCAA
GTTGAAGACCCCAAAGACGGACGTAGTCGTTGGACCCGCGTTCGGGGCTGGATGAGGGGCTGGATCCCTTCAGTG
TCCCCTGCGCGACGGCTTCGCTCTGACGCCACAGTCTCTTCAGAGGAGAACCAATCTCTCCTGCAGAATGAGCGG
GAGAGATACGGTACAGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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