© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1606.t1 |
| Gene name | |
| Location | scaffold_006:78282..79444 |
| Strand | - |
| Gene length (bp) | 1162 |
| Transcript length (bp) | 996 |
| Coding sequence length (bp) | 996 |
| Protein length (aa) | 332 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12271 | Chs7 | Chitin synthase export chaperone | 1.6E-126 | 2 | 285 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 49 | 71 | 22 |
| 2 | 84 | 106 | 22 |
| 3 | 116 | 138 | 22 |
| 4 | 150 | 172 | 22 |
| 5 | 187 | 209 | 22 |
| 6 | 216 | 238 | 22 |
| 7 | 253 | 272 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1606.t1 MGFGDFDSLCEKAPLPLCSLVGPPSSISGSTGIIPNCYARNIELANTIIFEGASCFLHIIALGMTVIMILHIRSK FTAVGRKEIITFFYIYMALTLCSLILDAGVVPPGSSPFPYFAAVQNGLASALCTSLLINGFVGFQLYEDGTILSV WLLRLSSAAMFVISFLVSLATFKSWGGLGPTNTVGMFVVLYVLNAICIAVYLVMSLLLVMNTLEDRWPLGHIAFG LVVFICGQVLLYAFSDTICDSVQHYMDGLFFATFCNLLAVMMVYKFWDYITKEDLEFSVGIKPNTWEVKELLPDE DRRQTGYYADANSEYAGSMYHHRTSTYHGHN* |
| Coding | >Ani_SJS100_1|g1606.t1 ATGGGTTTTGGCGATTTCGATTCGTTATGCGAGAAGGCTCCTTTGCCGCTCTGCTCCCTGGTGGGTCCACCATCT TCAATATCGGGCTCGACGGGCATCATACCAAATTGTTATGCGCGAAACATTGAACTGGCCAATACCATCATCTTC GAAGGGGCCTCCTGCTTCCTTCACATCATCGCGCTGGGGATGACCGTGATTATGATTTTGCATATCCGGTCCAAG TTCACTGCTGTTGGTCGCAAAGAAATTATTACGTTCTTTTACATTTACATGGCTCTGACCCTATGTTCCCTGATC CTTGATGCAGGGGTTGTTCCACCTGGAAGTAGCCCATTTCCATACTTTGCAGCAGTGCAAAATGGGCTGGCGTCG GCGCTATGCACATCCCTGCTCATCAACGGATTTGTTGGTTTCCAACTCTACGAAGACGGAACAATCCTTTCAGTC TGGCTTCTTCGGCTTTCTTCCGCGGCGATGTTTGTCATCTCTTTCCTTGTCTCTCTCGCGACCTTCAAGTCATGG GGAGGCCTGGGTCCCACTAACACAGTTGGCATGTTTGTCGTTCTGTATGTCCTGAACGCCATCTGCATCGCCGTG TATCTGGTAATGTCACTGTTACTGGTAATGAACACCCTTGAGGACCGCTGGCCTCTCGGTCACATCGCTTTTGGT CTTGTGGTCTTCATCTGTGGTCAGGTGCTCCTTTACGCATTCAGTGACACCATCTGCGATAGCGTGCAACATTAC ATGGACGGTCTTTTCTTCGCCACGTTCTGTAACCTCTTGGCGGTCATGATGGTGTACAAGTTCTGGGACTACATT ACGAAAGAAGATCTCGAGTTTTCCGTCGGGATCAAGCCCAACACCTGGGAGGTCAAGGAACTCCTCCCGGATGAG GATCGCCGGCAGACAGGTTACTACGCTGATGCAAATTCGGAGTATGCCGGGAGCATGTATCATCATCGGACATCG ACCTATCACGGCCATAACTAG |
| Transcript | >Ani_SJS100_1|g1606.t1 ATGGGTTTTGGCGATTTCGATTCGTTATGCGAGAAGGCTCCTTTGCCGCTCTGCTCCCTGGTGGGTCCACCATCT TCAATATCGGGCTCGACGGGCATCATACCAAATTGTTATGCGCGAAACATTGAACTGGCCAATACCATCATCTTC GAAGGGGCCTCCTGCTTCCTTCACATCATCGCGCTGGGGATGACCGTGATTATGATTTTGCATATCCGGTCCAAG TTCACTGCTGTTGGTCGCAAAGAAATTATTACGTTCTTTTACATTTACATGGCTCTGACCCTATGTTCCCTGATC CTTGATGCAGGGGTTGTTCCACCTGGAAGTAGCCCATTTCCATACTTTGCAGCAGTGCAAAATGGGCTGGCGTCG GCGCTATGCACATCCCTGCTCATCAACGGATTTGTTGGTTTCCAACTCTACGAAGACGGAACAATCCTTTCAGTC TGGCTTCTTCGGCTTTCTTCCGCGGCGATGTTTGTCATCTCTTTCCTTGTCTCTCTCGCGACCTTCAAGTCATGG GGAGGCCTGGGTCCCACTAACACAGTTGGCATGTTTGTCGTTCTGTATGTCCTGAACGCCATCTGCATCGCCGTG TATCTGGTAATGTCACTGTTACTGGTAATGAACACCCTTGAGGACCGCTGGCCTCTCGGTCACATCGCTTTTGGT CTTGTGGTCTTCATCTGTGGTCAGGTGCTCCTTTACGCATTCAGTGACACCATCTGCGATAGCGTGCAACATTAC ATGGACGGTCTTTTCTTCGCCACGTTCTGTAACCTCTTGGCGGTCATGATGGTGTACAAGTTCTGGGACTACATT ACGAAAGAAGATCTCGAGTTTTCCGTCGGGATCAAGCCCAACACCTGGGAGGTCAAGGAACTCCTCCCGGATGAG GATCGCCGGCAGACAGGTTACTACGCTGATGCAAATTCGGAGTATGCCGGGAGCATGTATCATCATCGGACATCG ACCTATCACGGCCATAACTAG |
| Gene | >Ani_SJS100_1|g1606.t1 ATGGGTTTTGGCGATTTCGATTCGTTATGCGAGAAGGCTCCTTTGCCGCTCTGCTCCCTGGTGGGTCCACCATCT TCAATATCGGGCTCGACGGGCATCATACCAAATTGTTATGCGCGAAACATTGAACTGGCCAATACCATCATCTTC GAAGGGGCCTCCTGCTTCCTTCACATCATCGCGCTGGGGATGACCGTGATTATGATTTTGCATATCCGGTCCAAG TTCACTGCTGTTGGTAAGTGTCCTCACATTATGTCTCTATGTGTCGCGGTGCTGGAGTCAAGTGGCCCCCCGAGA ACCGAACATCATTTACCAACACCATGTTATCACAGGTCGCAAAGAAATTATTACGTTCTTTTACATTTACATGGC TCTGACCCTATGTTCCCTGATCCTTGATGCAGGGGTTGTTCCACCTGGAAGTAGCCCATTTCCATACTTTGCAGC AGTGCAAAATGGGCTGGCGTCGGCGCTATGCACATCCCTGCTCATCAACGGATTTGTTGGTTTCCAACTCTACGA AGACGGAACAATCCTTTCAGTCTGGCTTCTTCGGCTTTCTTCCGCGGCGATGTTTGTCATCTCTTTCCTTGTCTC TCTCGCGACCTTCAAGTCATGGGGAGGCCTGGGTCCCACTAACACAGTTGGCATGTTTGTCGTTCTGTATGTCCT GAACGCCATCTGCATCGCCGTGTATCTGGTAATGTCACTGTTACTGGTAATGAACACCCTTGAGGACCGCTGGCC TCTCGGTCACATCGCTTTTGGTCTTGTGGTCTTCATCTGTGGTCAGGTGCTCCTTTACGCATTCAGTGACACCAT CTGCGATAGCGTGCAACATTACATGGACGGTCTTTTCTTCGCCACGTTCTGTAACCTCTTGGCGGTCATGATGGT GTACAAGGTACGTATTTCCATCATTGTTCCAGAAGACTAAGACCCTGCAAGGTTTCTGACACGCACCCCTGTCTA GTTCTGGGACTACATTACGAAAGAAGATCTCGAGTTTTCCGTCGGGATCAAGCCCAACACCTGGGAGGTCAAGGA ACTCCTCCCGGATGAGGATCGCCGGCAGACAGGTTACTACGCTGATGCAAATTCGGAGTATGCCGGGAGCATGTA TCATCATCGGACATCGACCTATCACGGCCATAACTAG |