Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1593.t1
Gene name
Locationscaffold_006:55359..56946
Strand-
Gene length (bp)1587
Transcript length (bp)1323
Coding sequence length (bp)1323
Protein length (aa) 441

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00009 GTP_EFTU Elongation factor Tu GTP binding domain 6.9E-55 50 243
PF03143 GTP_EFTU_D3 Elongation factor Tu C-terminal domain 4.4E-26 342 437
PF03144 GTP_EFTU_D2 Elongation factor Tu domain 2 8.4E-16 267 336
PF01926 MMR_HSR1 50S ribosome-binding GTPase 1.4E-04 55 174

GO

GO Term Description Terminal node
GO:0003924 GTPase activity Yes
GO:0005525 GTP binding Yes
GO:0032553 ribonucleotide binding No
GO:0036094 small molecule binding No
GO:0043167 ion binding No
GO:0032561 guanyl ribonucleotide binding No
GO:0032555 purine ribonucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0016787 hydrolase activity No
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides No
GO:0003674 molecular_function No
GO:0017076 purine nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0000166 nucleotide binding No
GO:0019001 guanyl nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0016817 hydrolase activity, acting on acid anhydrides No
GO:0043168 anion binding No
GO:0003824 catalytic activity No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0016462 pyrophosphatase activity No
GO:0017111 nucleoside-triphosphatase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1593.t1
MSSLARSANLLFRSSRASLLRPRAVNPIQHVFLGDKLAARGMATAFERTKPHVNIGTIGHVDHGKTTLTAAITKH
QASKGLAQFLEYGAIDKAPEERKRGITISSAHIEYATDARHYSHVDCPGHADYIKNMITGAANMDGAIIVVAASD
GQMPQTREHLLLARQVGVQKIVVFVNKVDAIDDPEMLELVELEMRELLSSYGFEGEETPIVFGSALCAIEDRRPD
IGAERIDALLEAVDTWIPTPQRDLDKPFLMSIEEVFSIPGRGTVASGRVERGLLKRDSEVEIIGTTNEVIKTKVT
DIETFKKSCTESRAGDNSGLLLRGVRREDLRRGMVIAAPGSAKANSKFMVSMYVLTEAEGGRRTGFGVQYRPQLF
IRTADEAAEFSFPDGDQSRRIMPGDNVEMIVKTHRPVAAEAGQRFNIREGGRTVATGLVTRVLTE*
Coding >Ani_SJS100_1|g1593.t1
ATGTCCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTAGCAGGGCCTCCCTGCTGCGCCCCCGCGCTGTC
AACCCCATCCAGCATGTCTTCCTCGGCGACAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCGTACCAAG
CCTCACGTCAACATTGGTACCATTGGTCACGTCGATCACGGCAAGACCACCTTGACCGCTGCCATCACCAAGCAC
CAGGCCTCCAAGGGTCTCGCTCAGTTCCTTGAGTATGGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTGGT
ATCACCATCTCCTCTGCCCACATCGAGTACGCTACCGATGCTCGTCACTACTCCCACGTCGACTGCCCCGGTCAC
GCCGATTACATCAAGAACATGATCACTGGTGCCGCCAACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCGAC
GGTCAGATGCCCCAGACTCGTGAGCACTTGCTGCTTGCTCGTCAGGTCGGTGTCCAGAAGATCGTTGTCTTCGTC
AACAAGGTCGATGCCATCGATGACCCGGAGATGCTGGAGCTCGTCGAGCTGGAAATGCGCGAGCTTCTCAGCAGC
TACGGCTTCGAGGGTGAGGAGACCCCCATCGTCTTCGGCTCTGCTCTCTGCGCCATTGAGGACCGCCGCCCCGAC
ATCGGTGCCGAGCGTATCGACGCTCTCCTCGAGGCCGTTGACACCTGGATCCCCACTCCCCAGCGTGACCTTGAC
AAGCCTTTCTTGATGTCCATTGAGGAAGTTTTCTCCATCCCTGGTCGTGGTACCGTCGCTTCCGGCCGTGTTGAG
CGTGGTCTCCTGAAGCGTGATAGCGAGGTTGAGATCATCGGTACGACCAACGAGGTCATCAAGACCAAGGTCACC
GACATTGAGACCTTCAAGAAGTCCTGCACTGAGTCCCGCGCTGGTGACAACTCCGGTCTCCTTCTCCGTGGTGTC
CGCCGTGAGGATCTCCGCCGTGGTATGGTCATTGCCGCTCCTGGCAGCGCCAAGGCCAACAGCAAGTTCATGGTC
TCCATGTACGTCCTCACCGAGGCTGAGGGTGGTCGCCGTACCGGTTTCGGTGTCCAGTACCGTCCCCAGCTGTTC
ATCCGCACTGCCGATGAGGCTGCTGAGTTCAGCTTCCCCGACGGAGACCAGTCCCGCCGTATCATGCCCGGTGAC
AACGTCGAGATGATCGTCAAGACCCACCGCCCCGTCGCCGCCGAGGCCGGTCAGCGCTTCAACATCCGTGAGGGT
GGTCGCACTGTTGCCACTGGTCTGGTCACTCGTGTCCTGACCGAGTAA
Transcript >Ani_SJS100_1|g1593.t1
ATGTCCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTAGCAGGGCCTCCCTGCTGCGCCCCCGCGCTGTC
AACCCCATCCAGCATGTCTTCCTCGGCGACAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCGTACCAAG
CCTCACGTCAACATTGGTACCATTGGTCACGTCGATCACGGCAAGACCACCTTGACCGCTGCCATCACCAAGCAC
CAGGCCTCCAAGGGTCTCGCTCAGTTCCTTGAGTATGGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTGGT
ATCACCATCTCCTCTGCCCACATCGAGTACGCTACCGATGCTCGTCACTACTCCCACGTCGACTGCCCCGGTCAC
GCCGATTACATCAAGAACATGATCACTGGTGCCGCCAACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCGAC
GGTCAGATGCCCCAGACTCGTGAGCACTTGCTGCTTGCTCGTCAGGTCGGTGTCCAGAAGATCGTTGTCTTCGTC
AACAAGGTCGATGCCATCGATGACCCGGAGATGCTGGAGCTCGTCGAGCTGGAAATGCGCGAGCTTCTCAGCAGC
TACGGCTTCGAGGGTGAGGAGACCCCCATCGTCTTCGGCTCTGCTCTCTGCGCCATTGAGGACCGCCGCCCCGAC
ATCGGTGCCGAGCGTATCGACGCTCTCCTCGAGGCCGTTGACACCTGGATCCCCACTCCCCAGCGTGACCTTGAC
AAGCCTTTCTTGATGTCCATTGAGGAAGTTTTCTCCATCCCTGGTCGTGGTACCGTCGCTTCCGGCCGTGTTGAG
CGTGGTCTCCTGAAGCGTGATAGCGAGGTTGAGATCATCGGTACGACCAACGAGGTCATCAAGACCAAGGTCACC
GACATTGAGACCTTCAAGAAGTCCTGCACTGAGTCCCGCGCTGGTGACAACTCCGGTCTCCTTCTCCGTGGTGTC
CGCCGTGAGGATCTCCGCCGTGGTATGGTCATTGCCGCTCCTGGCAGCGCCAAGGCCAACAGCAAGTTCATGGTC
TCCATGTACGTCCTCACCGAGGCTGAGGGTGGTCGCCGTACCGGTTTCGGTGTCCAGTACCGTCCCCAGCTGTTC
ATCCGCACTGCCGATGAGGCTGCTGAGTTCAGCTTCCCCGACGGAGACCAGTCCCGCCGTATCATGCCCGGTGAC
AACGTCGAGATGATCGTCAAGACCCACCGCCCCGTCGCCGCCGAGGCCGGTCAGCGCTTCAACATCCGTGAGGGT
GGTCGCACTGTTGCCACTGGTCTGGTCACTCGTGTCCTGACCGAGTAA
Gene >Ani_SJS100_1|g1593.t1
ATGTCCAGCCTCGCCAGATCTGCCAACCTCCTTTTCCGCTCTAGCAGGGCCTCCCTGCTGCGCCCCCGCGCTGTC
AACCCCATCCAGCATGTCTTCCTCGGCGACAAGCTGGCTGCCCGTGGTATGGCAACCGCTTTCGAGCGTACCAAG
CCTCACGTCAACATTGGTAGGTTGCCATCATCATCTCTTATCCATCAATGCAGTTACTCATCGCTATTTCATAGG
TACCATTGGTCACGTCGATCACGGCAAGGTTAGACCACAATTCCTTCCCCTCTCGCTGCGTTGATGTTTTCCCCG
ATATGGTCCGAAAACTTCTCACACGTTTCCTCTAGACCACCTTGACCGCTGCCATCACCAAGCACCAGGCCTCCA
AGGGTCTCGCTCAGTTCCTTGAGTATGGTGCCATTGACAAGGCTCCTGAGGAGCGTAAGCGTGGTATCACCATCT
CCTCTGCCCACATCGAGTACGCTACCGATGCTCGTCACTACTCCCACGTCGACTGCCCCGGTCACGCCGATTACA
TCAAGAACATGATCACTGGTGCCGCCAACATGGACGGTGCTATCATTGTCGTCGCCGCTTCCGACGGTCAGATGT
ACGCTGAAACCCCAACAGAATAATCCCCTCGAGTATATGTGCTTACACTGGCTATCAACAGGCCCCAGACTCGTG
AGCACTTGCTGCTTGCTCGTCAGGTCGGTGTCCAGAAGATCGTTGTCTTCGTCAACAAGGTCGATGCCATCGATG
ACCCGGAGATGCTGGAGCTCGTCGAGCTGGAAATGCGCGAGCTTCTCAGCAGCTACGGCTTCGAGGGTGAGGAGA
CCCCCATCGTCTTCGGCTCTGCTCTCTGCGCCATTGAGGACCGCCGCCCCGACATCGGTGCCGAGCGTATCGACG
CTCTCCTCGAGGCCGTTGACACCTGGATCCCCACTCCCCAGCGTGACCTTGACAAGCCTTTCTTGATGTCCATTG
AGGAAGTTTTCTCCATCCCTGGTCGTGGTACCGTCGCTTCCGGCCGTGTTGAGCGTGGTCTCCTGAAGCGTGATA
GCGAGGTTGAGATCATCGGTACGACCAACGAGGTCATCAAGACCAAGGTCACCGACATTGAGACCTTCAAGAAGT
CCTGCACTGAGTCCCGCGCTGGTGACAACTCCGGTCTCCTTCTCCGTGGTGTCCGCCGTGAGGATCTCCGCCGTG
GTATGGTCATTGCCGCTCCTGGCAGCGCCAAGGCCAACAGCAAGTTCATGGTCTCCATGTACGTCCTCACCGAGG
CTGAGGGTGGTCGCCGTACCGGTTTCGGTGTCCAGTACCGTCCCCAGCTGTTCATCCGCACTGCCGGTAAGTGAT
ATCGTTTTACACTCCGCTACGAGAGAACAGGTTCTGATTTTGTCTGCTGCAGATGAGGCTGCTGAGTTCAGCTTC
CCCGACGGAGACCAGTCCCGCCGTATCATGCCCGGTGACAACGTCGAGATGATCGTCAAGACCCACCGCCCCGTC
GCCGCCGAGGCCGGTCAGCGCTTCAACATCCGTGAGGGTGGTCGCACTGTTGCCACTGGTCTGGTCACTCGTGTC
CTGACCGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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