© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1580.t1 |
| Gene name | |
| Location | scaffold_006:17806..20458 |
| Strand | - |
| Gene length (bp) | 2652 |
| Transcript length (bp) | 2298 |
| Coding sequence length (bp) | 2298 |
| Protein length (aa) | 766 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 4.7E-09 | 20 | 117 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.1E-13 | 75 | 166 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.4E-06 | 212 | 278 |
| PF13857 | Ank_5 | Ankyrin repeats (many copies) | 3.2E-08 | 79 | 126 |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 5.7E-05 | 75 | 113 |
| PF13606 | Ank_3 | Ankyrin repeat | 7.0E-04 | 92 | 117 |
| PF00023 | Ank | Ankyrin repeat | 8.0E-04 | 92 | 118 |
| PF00023 | Ank | Ankyrin repeat | 3.1E-02 | 138 | 168 |
| PF01544 | CorA | CorA-like Mg2+ transporter protein | 1.2E-13 | 560 | 737 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030001 | metal ion transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0046873 | metal ion transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0006812 | cation transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 64 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 688 | 710 | 22 |
| 2 | 715 | 737 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1580.t1 MEKTLTATYLELDDDRINQLMQAAHQGLLCEVQSLLYGVSPNVQDQTGRTAFSWAASCDLSRAQSLEERDRCDIL LQYLLDRGANPDLGDHHGETPLHWAVKGGDSDMVDLLLTKGVASDIADSRGRRADPDSKDSRGRTPLSWAAENWH LDTVRALIAHGASADIHDHEGQIPLWWVISNHNKRREANGQHADDFQQWLAALGPTHGVEPMTKARRTFLAWASE RGDTALVHELLKTTWADPNSIDRYRKTPLVYALEWSHYEIADMLMSGSGDDMNPKHDVVSLKLMVQESRARLLKP FLERYKPDLSNEDESSPIPLMRWALQQADRSTVAVLLEHKAGVDGLENGDWFGPCSTAGASANLMLAQARTDGAS IPVMDMTIPDGDRATLTALLSHRRQMMALDDGYEGRYSRGLKPSVAVDIVVFRDGRRAARWITDDTLYQDIKAMP KTADETHLLLFRENNYWNTYCQLTDTPNELQFSLGNKSPCRTFSLFIRLDMKIGTSFTDDGDDDRKVRIIEWAVL EAPQKAIHYFSNLPYGWIPESDLELVQLFMQTWRDDWIAFCREARGYLGRLRTHQLTARGKDDRLIDSIAESMQQ WTQIQAALAEQLSQARNFVTQYQRFSETRKFSEKMQGMIDGLDKEISGQIDKLEQTVRDLLQIEFAWVSINEAHR STSLATSMKRLSWITFVFLPLTFASSLFGMNVDILSDNPPWHWYPLVGGVLLLLTVAVWLSTKFTNVERWVEDQA EQIINGRQKKEILAW* |
| Coding | >Ani_SJS100_1|g1580.t1 ATGGAGAAGACTCTGACGGCTACCTACTTGGAATTGGACGATGACCGCATCAACCAGCTCATGCAGGCAGCCCAC CAGGGCCTGCTTTGCGAAGTCCAATCCCTTCTTTATGGCGTTTCCCCGAACGTCCAAGACCAGACCGGTCGGACG GCCTTCTCCTGGGCCGCATCCTGTGATCTCTCCCGGGCGCAGTCCCTAGAGGAACGAGACCGTTGCGATATTCTG TTGCAGTATCTCCTGGACAGAGGTGCCAATCCCGATCTTGGTGACCACCATGGCGAGACTCCTCTCCACTGGGCA GTCAAAGGTGGAGACTCCGACATGGTAGACCTCCTTCTAACGAAGGGAGTGGCCTCCGATATCGCAGACTCCCGT GGTCGGAGAGCGGATCCAGATAGCAAGGATAGCCGGGGTCGGACCCCGCTATCCTGGGCTGCTGAAAACTGGCAC TTGGATACCGTGCGTGCATTGATTGCGCACGGTGCTAGCGCCGATATCCACGACCACGAGGGGCAGATTCCACTC TGGTGGGTCATCAGTAACCACAATAAGAGACGGGAGGCAAACGGGCAGCATGCAGATGACTTCCAACAGTGGCTC GCCGCTCTCGGACCGACGCATGGTGTGGAGCCGATGACCAAGGCCCGGCGAACCTTTCTAGCCTGGGCGAGTGAA CGTGGCGATACAGCGCTTGTGCACGAGCTGCTCAAGACGACCTGGGCAGATCCAAACTCTATTGATCGCTACAGG AAGACCCCGTTGGTGTACGCGCTGGAATGGAGTCACTACGAAATAGCGGACATGCTTATGTCTGGCTCTGGGGAC GACATGAACCCTAAGCATGATGTTGTGTCGCTCAAGCTGATGGTCCAAGAGAGCCGAGCTCGGTTGCTGAAACCG TTCTTGGAGCGGTACAAGCCTGACCTTAGCAACGAGGATGAGTCAAGCCCAATTCCTTTGATGAGATGGGCGCTG CAGCAGGCTGATCGCTCGACGGTCGCCGTTCTCCTGGAACACAAGGCAGGTGTGGATGGGCTGGAGAACGGAGAT TGGTTCGGCCCTTGCAGCACGGCTGGAGCATCAGCAAATTTAATGTTGGCTCAAGCCCGAACCGATGGAGCCTCG ATTCCCGTGATGGATATGACCATTCCGGATGGTGATCGTGCCACCTTAACGGCATTGTTAAGCCATCGGAGGCAG ATGATGGCGCTTGACGATGGCTACGAAGGACGCTACAGCCGTGGGCTGAAACCGAGCGTCGCCGTGGATATCGTG GTTTTCCGGGATGGGCGTCGCGCGGCGCGCTGGATCACGGATGATACTCTGTACCAGGACATCAAGGCAATGCCG AAGACGGCGGACGAAACACATCTGTTGCTTTTCCGGGAGAATAATTACTGGAATACATATTGCCAGCTGACCGAT ACGCCAAACGAGCTGCAATTCTCCCTGGGAAATAAGAGTCCCTGCCGGACGTTCTCGCTGTTCATCCGCTTGGAC ATGAAGATTGGAACATCCTTTACTGATGACGGGGACGACGACCGCAAGGTCCGCATTATCGAATGGGCCGTCCTT GAAGCGCCCCAGAAGGCAATTCACTACTTCAGTAACCTACCATACGGGTGGATCCCAGAAAGTGACCTAGAGCTG GTGCAGCTTTTTATGCAAACGTGGCGGGACGACTGGATCGCATTTTGCCGGGAGGCTAGAGGGTACTTGGGGCGG CTGCGAACGCACCAATTGACCGCCCGAGGCAAAGACGACCGGCTCATCGACTCCATCGCGGAAAGCATGCAGCAA TGGACGCAGATACAGGCAGCGTTGGCCGAGCAGCTCAGTCAGGCTCGGAACTTTGTTACGCAGTACCAGCGGTTT AGCGAGACGCGCAAGTTCAGTGAGAAGATGCAGGGCATGATTGATGGGCTAGATAAAGAGATATCGGGGCAGATT GATAAGTTAGAGCAGACGGTTCGCGATTTGCTGCAGATTGAATTTGCGTGGGTATCGATCAACGAGGCGCACCGG TCGACTAGTTTGGCGACGAGCATGAAACGGCTCAGTTGGATTACATTCGTTTTCCTTCCATTGACATTTGCATCG AGCTTATTCGGCATGAACGTGGATATTCTGAGCGACAACCCTCCATGGCACTGGTATCCGCTCGTCGGGGGAGTG TTACTGCTATTAACGGTGGCAGTATGGTTGTCAACCAAGTTTACAAATGTTGAGCGATGGGTTGAGGATCAAGCG GAGCAGATTATCAATGGACGACAGAAGAAAGAAATTCTCGCGTGGTGA |
| Transcript | >Ani_SJS100_1|g1580.t1 ATGGAGAAGACTCTGACGGCTACCTACTTGGAATTGGACGATGACCGCATCAACCAGCTCATGCAGGCAGCCCAC CAGGGCCTGCTTTGCGAAGTCCAATCCCTTCTTTATGGCGTTTCCCCGAACGTCCAAGACCAGACCGGTCGGACG GCCTTCTCCTGGGCCGCATCCTGTGATCTCTCCCGGGCGCAGTCCCTAGAGGAACGAGACCGTTGCGATATTCTG TTGCAGTATCTCCTGGACAGAGGTGCCAATCCCGATCTTGGTGACCACCATGGCGAGACTCCTCTCCACTGGGCA GTCAAAGGTGGAGACTCCGACATGGTAGACCTCCTTCTAACGAAGGGAGTGGCCTCCGATATCGCAGACTCCCGT GGTCGGAGAGCGGATCCAGATAGCAAGGATAGCCGGGGTCGGACCCCGCTATCCTGGGCTGCTGAAAACTGGCAC TTGGATACCGTGCGTGCATTGATTGCGCACGGTGCTAGCGCCGATATCCACGACCACGAGGGGCAGATTCCACTC TGGTGGGTCATCAGTAACCACAATAAGAGACGGGAGGCAAACGGGCAGCATGCAGATGACTTCCAACAGTGGCTC GCCGCTCTCGGACCGACGCATGGTGTGGAGCCGATGACCAAGGCCCGGCGAACCTTTCTAGCCTGGGCGAGTGAA CGTGGCGATACAGCGCTTGTGCACGAGCTGCTCAAGACGACCTGGGCAGATCCAAACTCTATTGATCGCTACAGG AAGACCCCGTTGGTGTACGCGCTGGAATGGAGTCACTACGAAATAGCGGACATGCTTATGTCTGGCTCTGGGGAC GACATGAACCCTAAGCATGATGTTGTGTCGCTCAAGCTGATGGTCCAAGAGAGCCGAGCTCGGTTGCTGAAACCG TTCTTGGAGCGGTACAAGCCTGACCTTAGCAACGAGGATGAGTCAAGCCCAATTCCTTTGATGAGATGGGCGCTG CAGCAGGCTGATCGCTCGACGGTCGCCGTTCTCCTGGAACACAAGGCAGGTGTGGATGGGCTGGAGAACGGAGAT TGGTTCGGCCCTTGCAGCACGGCTGGAGCATCAGCAAATTTAATGTTGGCTCAAGCCCGAACCGATGGAGCCTCG ATTCCCGTGATGGATATGACCATTCCGGATGGTGATCGTGCCACCTTAACGGCATTGTTAAGCCATCGGAGGCAG ATGATGGCGCTTGACGATGGCTACGAAGGACGCTACAGCCGTGGGCTGAAACCGAGCGTCGCCGTGGATATCGTG GTTTTCCGGGATGGGCGTCGCGCGGCGCGCTGGATCACGGATGATACTCTGTACCAGGACATCAAGGCAATGCCG AAGACGGCGGACGAAACACATCTGTTGCTTTTCCGGGAGAATAATTACTGGAATACATATTGCCAGCTGACCGAT ACGCCAAACGAGCTGCAATTCTCCCTGGGAAATAAGAGTCCCTGCCGGACGTTCTCGCTGTTCATCCGCTTGGAC ATGAAGATTGGAACATCCTTTACTGATGACGGGGACGACGACCGCAAGGTCCGCATTATCGAATGGGCCGTCCTT GAAGCGCCCCAGAAGGCAATTCACTACTTCAGTAACCTACCATACGGGTGGATCCCAGAAAGTGACCTAGAGCTG GTGCAGCTTTTTATGCAAACGTGGCGGGACGACTGGATCGCATTTTGCCGGGAGGCTAGAGGGTACTTGGGGCGG CTGCGAACGCACCAATTGACCGCCCGAGGCAAAGACGACCGGCTCATCGACTCCATCGCGGAAAGCATGCAGCAA TGGACGCAGATACAGGCAGCGTTGGCCGAGCAGCTCAGTCAGGCTCGGAACTTTGTTACGCAGTACCAGCGGTTT AGCGAGACGCGCAAGTTCAGTGAGAAGATGCAGGGCATGATTGATGGGCTAGATAAAGAGATATCGGGGCAGATT GATAAGTTAGAGCAGACGGTTCGCGATTTGCTGCAGATTGAATTTGCGTGGGTATCGATCAACGAGGCGCACCGG TCGACTAGTTTGGCGACGAGCATGAAACGGCTCAGTTGGATTACATTCGTTTTCCTTCCATTGACATTTGCATCG AGCTTATTCGGCATGAACGTGGATATTCTGAGCGACAACCCTCCATGGCACTGGTATCCGCTCGTCGGGGGAGTG TTACTGCTATTAACGGTGGCAGTATGGTTGTCAACCAAGTTTACAAATGTTGAGCGATGGGTTGAGGATCAAGCG GAGCAGATTATCAATGGACGACAGAAGAAAGAAATTCTCGCGTGGTGA |
| Gene | >Ani_SJS100_1|g1580.t1 ATGGAGAAGACTCTGACGGCTACCTACTTGGAATTGGACGATGACCGCATCAACCAGCTCATGCAGGCAGCCCAC CAGGGCCTGCTTTGCGAAGTCCAATCCCTTCTTTATGGCGTTTCCCCGAACGTCCAAGACCAGACCGGTCGGACG GCCTTCTCCTGGGCCGCATCCTGTGATCTCTCCCGGGCGCAGTCCCTAGAGGAACGAGACCGTTGCGATATTCTG TTGCAGTATCTCCTGGACAGAGGTGCCAATCCCGATCTTGGTGACCACCATGGCGAGACTCCTCTCCACTGGGCA GTCAAAGGTGGAGACTCCGACATGGTAGACCTCCTTCTAACGAAGGGAGTGGCCTCCGATATCGCAGACTCCCGT GGTCGTACGCCATTATCACGTGCAGCGGGACAAGGACACTGCAGGATCGTGCAGTTATTGCTATCCACAGGGAGA GCGGATCCAGATAGCAAGGATAGCCGGGGTCGGACCCCGCTATCCTGGGCTGCTGAAAACTGGCACTTGGATACC GTGCGTGCATTGATTGCGCACGGTGCTAGCGCCGATATCCACGACCACGAGGGGCAGATTCCACTCTGGTGGGTC ATCAGTAACCACAATAAGAGACGGGAGGCAAACGGGCAGCATGCAGATGACTTCCAACAGTGGCTCGCCGCTCTC GGACCGACGCATGGTGTGGAGCCGATGACCAAGGCCCGGCGAACCTTTCTAGCCTGGGCGAGTGAACGTGGCGAT ACAGCGCTTGTGCACGAGCTGCTCAAGACGACCTGGGCAGATCCAAACTCTATTGATCGCTACAGGAAGACCCCG TTGGTGTACGCGCTGGAATGGAGTCACTACGAAATAGCGGACATGCTTATGTCTGGCTCTGGGGACGACATGAAC CCTAAGCATGATGTTGTGTCGCTCAAGCTGATGGTCCAAGAGAGCCGAGCTCGGTTGCTGAAACCGTTCTTGGAG CGGTACAAGCCTGACCTTAGCAACGAGGATGAGTCAAGCCCAATTCCTTTGATGAGATGGGCGCTGCAGCAGGCT GATCGCTCGACGGTCGCCGTTCTCCTGGAACACAAGGCAGGTGTGGATGGGCTGGAGAACGGAGATTGGTTCGGC CCTTGCAGCACGGCTGGAGCATCAGCAAATTTAATGTTGGCTCAAGCCCGAACCGATGGAGCCTCGATTCCCGTG ATGGATATGACCATTCCGGATGGTGATCGTGCCACCTTAACGGCATTGTTAAGCCATCGGAGGCAGATGATGGCG CTTGACGATGGCTACGAAGGACGCTACAGCCGTGGGCTGAAACCGAGCGTCGCCGTGGATATCGTGGTTTTCCGG GATGGGCGTCGCGCGGCGCGCTGGATCACGGATGATACTCTGTACCAGGACATCAAGGCAATGCCGAAGACGGCG GACGAAACACATCTGTTGTAAGTTGATCGAGTGAATAATGGCCCTCTCTAAGATCACCTCTCTCATGCAACATAG GCTTTTCCGGGAGAATAATTACTGGAATACATATTGCCAGCTGACCGATACGCCAAACGAGCTGCAATTCTCCCT GGGAAATAAGAGTCCCTGCCGGACGTTCTCGCTGTTCATCCGCTTGGACATGAAGATTGGAACATCCTTTACTGA TGACGGGGACGACGACCGCAAGGTCCGCATTATCGAATGGGCCGTCCTTGAAGCGCCCCAGAAGGCAATTCACTA CTTCAGTAACCTACCATACGGGTGGATCCCAGAAAGTGACCTAGAGCTGGTGCAGCTTTTTATGCAAACGTGGCG GGACGACTGGATCGCATTTTGCCGGGAGGCTAGAGGGTACTTGGGGCGGCTGGTATGTTTCTGAAAGCTATTCCG TCAAGCGACTGCTAATGAAGCAGCGAACGCACCAATTGACCGCCCGAGGCAAAGACGACCGGCTCATCGACTCCA TCGCGGAAAGCATGCAGCAATGGACGCAGATACAGGCAGCGTTGGCCGAGCAGCTCAGTCAGGCTCGGAACTTTG TTACGCAGTACCAGCGGTTTAGCGAGACGCGCAAGTTCAGTGAGAAGATGCAGGGCATGATTGATGGGCTAGATA AAGAGATATCGGGGCAGATTGATAAGTTAGAGCAGACGGTTCGCGATTTGCTGCAGATTGTACGCTTCTCTTATA ACAGTTGATAAACGTATGGCTAATCCTGGAAGGAATTTGCGTGGGTATCGATCAACGAGGCGCACCGGTCGACTA GTTTGGCGACGAGCATGAAACGGCTCAGTTGGATTACAGTAAGTCGGCTGTCTTGTTTGGAATACGGCGACTAAC AGATTTGGTAGTTCGTTTTCCTTCCATTGACATTTGCATCGGTATGTATATCACCATCCGCTCACAGGACTAGTC TGACTGCGCAGAGCTTATTCGGCATGAACGTGGATATTCTGAGCGACAACCCTCCATGGCACTGGTATCCGCTCG TCGGGGGAGTGTTACTGCTATTAACGGTGGCAGTATGGTTGTCAACCAAGTTTACAAATGTAAGTCTCAGTAACT GAATATGAGCATCGCTAACTGTTACAGGTTGAGCGATGGGTTGAGGATCAAGCGGAGCAGATTATCAATGGACGA CAGAAGAAAGAAATTCTCGCGTGGTGA |