Protein ID | Ani_SJS100_1|g158.t1 |
Gene name | |
Location | scaffold_001:522294..523596 |
Strand | - |
Gene length (bp) | 1302 |
Transcript length (bp) | 1002 |
Coding sequence length (bp) | 1002 |
Protein length (aa) | 334 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 54 | 76 | 22 |
3 | 96 | 118 | 22 |
4 | 131 | 153 | 22 |
5 | 168 | 190 | 22 |
6 | 211 | 233 | 22 |
7 | 243 | 265 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g158.t1 MQQSFPARSECEDRGPLIVIINGTVTGLAAAIVALRFVSRAVIVKRLGIDDWTMMLATITAILNVAIAGLGVKYG TGKHDGTLSKVDELPAAKIRYITHIIYTPITGLIKTSICLLYLRLFPNLRKITLGTIAFIAAMSIAIILATIFQC WPVDAVYNPQKYDHYTCFASIPFWYATAALSLVTDLWILGLPIRTILVQAYKLGSMKRVVVIGLLSLGTFACIAS IVRMVYIIKLYESNDPSWSTFGVSVSSGIEVAVAIIAASLPSTKPVMDLIFPRLFSTSADKSHTTSAQVYHNRTS ARGHRQHDDISLVHLTMECDSGKDDSTTGLSRA* |
Coding | >Ani_SJS100_1|g158.t1 ATGCAGCAAAGCTTTCCAGCACGCTCTGAGTGTGAGGACCGTGGGCCCTTGATCGTCATCATCAATGGGACCGTA ACTGGGCTCGCAGCGGCCATCGTTGCCCTGCGATTCGTATCCCGTGCTGTGATTGTGAAGCGGCTAGGAATAGAT GACTGGACGATGATGCTCGCCACGATCACGGCCATTTTGAATGTTGCCATTGCAGGACTTGGAGTCAAATATGGT ACAGGGAAACATGATGGCACTCTCTCAAAGGTCGATGAGTTACCAGCAGCCAAGATTCGCTACATTACTCATATT ATCTACACTCCCATCACCGGCCTGATCAAGACGTCCATCTGCCTATTATATCTGCGTCTCTTCCCAAATCTCCGC AAAATCACTCTTGGCACCATAGCTTTTATCGCCGCCATGAGCATAGCCATTATCCTCGCCACCATTTTTCAATGC TGGCCCGTAGATGCAGTGTACAACCCTCAAAAATACGACCACTATACCTGTTTCGCGTCTATTCCTTTTTGGTAC GCCACAGCCGCATTATCACTGGTTACGGATCTGTGGATCCTAGGTTTACCGATCCGGACTATTTTAGTGCAGGCC TACAAATTGGGGAGCATGAAGCGTGTGGTAGTCATCGGTCTGTTATCCTTGGGAACGTTCGCCTGCATTGCCAGC ATTGTTCGAATGGTGTACATCATCAAGCTTTATGAGAGCAATGATCCAAGCTGGAGCACATTCGGCGTCTCCGTG TCGTCAGGAATCGAAGTTGCTGTTGCCATCATTGCAGCCAGCCTGCCAAGCACCAAGCCGGTCATGGATCTGATC TTCCCAAGACTATTCTCTACCAGTGCCGACAAGTCCCATACCACTAGTGCACAAGTGTACCATAATCGGACCTCT GCCCGCGGTCATCGCCAGCATGATGACATCTCGCTTGTTCATCTAACCATGGAATGTGATTCCGGGAAGGATGAC TCTACCACTGGACTTTCTCGTGCTTAG |
Transcript | >Ani_SJS100_1|g158.t1 ATGCAGCAAAGCTTTCCAGCACGCTCTGAGTGTGAGGACCGTGGGCCCTTGATCGTCATCATCAATGGGACCGTA ACTGGGCTCGCAGCGGCCATCGTTGCCCTGCGATTCGTATCCCGTGCTGTGATTGTGAAGCGGCTAGGAATAGAT GACTGGACGATGATGCTCGCCACGATCACGGCCATTTTGAATGTTGCCATTGCAGGACTTGGAGTCAAATATGGT ACAGGGAAACATGATGGCACTCTCTCAAAGGTCGATGAGTTACCAGCAGCCAAGATTCGCTACATTACTCATATT ATCTACACTCCCATCACCGGCCTGATCAAGACGTCCATCTGCCTATTATATCTGCGTCTCTTCCCAAATCTCCGC AAAATCACTCTTGGCACCATAGCTTTTATCGCCGCCATGAGCATAGCCATTATCCTCGCCACCATTTTTCAATGC TGGCCCGTAGATGCAGTGTACAACCCTCAAAAATACGACCACTATACCTGTTTCGCGTCTATTCCTTTTTGGTAC GCCACAGCCGCATTATCACTGGTTACGGATCTGTGGATCCTAGGTTTACCGATCCGGACTATTTTAGTGCAGGCC TACAAATTGGGGAGCATGAAGCGTGTGGTAGTCATCGGTCTGTTATCCTTGGGAACGTTCGCCTGCATTGCCAGC ATTGTTCGAATGGTGTACATCATCAAGCTTTATGAGAGCAATGATCCAAGCTGGAGCACATTCGGCGTCTCCGTG TCGTCAGGAATCGAAGTTGCTGTTGCCATCATTGCAGCCAGCCTGCCAAGCACCAAGCCGGTCATGGATCTGATC TTCCCAAGACTATTCTCTACCAGTGCCGACAAGTCCCATACCACTAGTGCACAAGTGTACCATAATCGGACCTCT GCCCGCGGTCATCGCCAGCATGATGACATCTCGCTTGTTCATCTAACCATGGAATGTGATTCCGGGAAGGATGAC TCTACCACTGGACTTTCTCGTGCTTAG |
Gene | >Ani_SJS100_1|g158.t1 ATGCAGCAAAGCTTTCCAGCACGCTCTGAGGCAAGTGCTTAAGCTTGTGGACGGTGCTCATACTGATTTTCGGCT TAGTGTGAGGACCGTGGGCCCTTGATCGTCATCATCAATGGGACCGTAACTGGGCTCGCAGCGGCCATCGTTGCC CTGCGATTCGTATCCCGTGCTGTGATTGTGAAGCGGCTAGGAATAGATGACTGGACGATGATGCTCGCCACGATC ACGGCCATTTTGAATGTTGCCATTGCAGGACTTGGTATGTACTTGGAGCTCGGGTCGGAGTACTGCAACTCATGC CAAATGTCCTCCTAGGAGTCAAATATGGTACAGGGAAACATGATGGCACTCTCTCAAAGGTCGATGAGTTACCAG CAGCCAAGGTGCGCCCGCATGCTCAGGAATATTTTCAACCCTCCCAATCGCAATCCAGATTCTGACCAGCGGCAT GATTGCCTGTAGATTCGCTACATTACTCATATTATCTACACTCCCATCACCGGCCTGATCAAGACGTCCATCTGC CTATTATATCTGCGTCTCTTCCCAAATCTCCGCAAAATCACTCTTGGCACCATAGCTTTTATCGCCGCCATGAGC ATAGCCATTATCCTCGCCACCATTTTTCAATGCTGGCCCGTAGATGCAGTGTACAACCCTCAAAAATACGACCAC TATACCTGTTTCGCGTCTATTCCTTTTTGGTACGCCACAGCCGCATTATCACTGGTTACGGATCTGTGGATCCTA GGTTTACCGATCCGGACTATTTTAGGTGCGTTCATAAACAAAGGGGGGCTGGTTAGAGAGGGCCGCACAGCAATT ACTCATGAGTGCAGGCCTACAAATTGGGGAGCATGAAGCGTGTGGTAGTCATCGGTCTGTTATCCTTGGGAACGT TGTAAGAATACCATCGGAACGAGTTGTAGAACATATCTGTCTAACAGGTTACCATGCAGCGCCTGCATTGCCAGC ATTGTTCGAATGGTGTACATCATCAAGCTTTATGAGAGCAATGATCCAAGCTGGAGCACATTCGGCGTCTCCGTG TCGTCAGGAATCGAAGTTGCTGTTGCCATCATTGCAGCCAGCCTGCCAAGCACCAAGCCGGTCATGGATCTGATC TTCCCAAGACTATTCTCTACCAGTGCCGACAAGTCCCATACCACTAGTGCACAAGTGTACCATAATCGGACCTCT GCCCGCGGTCATCGCCAGCATGATGACATCTCGCTTGTTCATCTAACCATGGAATGTGATTCCGGGAAGGATGAC TCTACCACTGGACTTTCTCGTGCTTAG |