Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g1572.t1
Gene name
Location	scaffold_005:710335..711123
Strand	-
Gene length (bp)	788
Transcript length (bp)	696
Coding sequence length (bp)	696
Protein length (aa)	232

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13577	SnoaL_4	SnoaL-like domain	1.6E-13	24	146

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 52	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g1572.t1 MVVNITAEDPQPTIHSHINGTTEEILDRLCVTELLKGWPVYRDASEWAHYRNCFAEQAYIFTTWSGGMPIDEFIE VSKKGRRNGDHIMHRENGTLVELNSKTGRAVGKMKATITQRFSFDGVEFDVECDCRFIMWCQKDPAGWKVHYKRL FYEKDKIMPVDGKHVPDYSEEELKPYPYGYRYLGASQARLGHKIKLDLPTMEDNDKFRGMYEAMEKWLRGEDIKE TLGIPV*
Coding	>Ani_SJS100_1\|g1572.t1 ATGGTCGTTAACATCACCGCCGAAGATCCTCAACCCACCATCCACAGCCACATCAATGGCACTACCGAAGAGATT CTGGATCGGCTCTGTGTCACCGAGCTTCTAAAGGGATGGCCGGTGTACCGGGATGCCTCTGAATGGGCCCACTAC CGGAATTGTTTCGCCGAACAGGCTTATATCTTTACTACATGGAGCGGAGGCATGCCCATCGACGAATTCATCGAA GTCTCTAAAAAGGGCCGTCGAAATGGCGACCACATCATGCACCGCGAAAACGGCACCCTCGTCGAGCTGAACTCC AAGACCGGCCGTGCTGTAGGTAAAATGAAGGCAACCATCACCCAGCGTTTCTCGTTCGATGGCGTCGAATTCGAC GTCGAATGCGACTGCCGCTTTATCATGTGGTGCCAGAAGGATCCGGCCGGGTGGAAGGTTCACTACAAGCGCTTG TTCTACGAGAAGGATAAGATCATGCCGGTGGATGGCAAGCATGTGCCTGACTACTCGGAGGAGGAGCTCAAGCCG TATCCGTATGGATACAGGTATTTGGGTGCCTCTCAGGCGAGACTGGGGCATAAGATCAAGTTGGATTTGCCGACT ATGGAGGACAATGATAAGTTCCGGGGGATGTATGAGGCTATGGAGAAGTGGTTGAGGGGGGAGGATATTAAGGAG ACGTTGGGGATTCCTGTATAA
Transcript	>Ani_SJS100_1\|g1572.t1 ATGGTCGTTAACATCACCGCCGAAGATCCTCAACCCACCATCCACAGCCACATCAATGGCACTACCGAAGAGATT CTGGATCGGCTCTGTGTCACCGAGCTTCTAAAGGGATGGCCGGTGTACCGGGATGCCTCTGAATGGGCCCACTAC CGGAATTGTTTCGCCGAACAGGCTTATATCTTTACTACATGGAGCGGAGGCATGCCCATCGACGAATTCATCGAA GTCTCTAAAAAGGGCCGTCGAAATGGCGACCACATCATGCACCGCGAAAACGGCACCCTCGTCGAGCTGAACTCC AAGACCGGCCGTGCTGTAGGTAAAATGAAGGCAACCATCACCCAGCGTTTCTCGTTCGATGGCGTCGAATTCGAC GTCGAATGCGACTGCCGCTTTATCATGTGGTGCCAGAAGGATCCGGCCGGGTGGAAGGTTCACTACAAGCGCTTG TTCTACGAGAAGGATAAGATCATGCCGGTGGATGGCAAGCATGTGCCTGACTACTCGGAGGAGGAGCTCAAGCCG TATCCGTATGGATACAGGTATTTGGGTGCCTCTCAGGCGAGACTGGGGCATAAGATCAAGTTGGATTTGCCGACT ATGGAGGACAATGATAAGTTCCGGGGGATGTATGAGGCTATGGAGAAGTGGTTGAGGGGGGAGGATATTAAGGAG ACGTTGGGGATTCCTGTATAA
Gene	>Ani_SJS100_1\|g1572.t1 ATGGTCGTTAACATCACCGCCGAAGATCCTCAACCCACCATCCACAGCCACATCAATGGCACTACCGAAGAGATT CTGGATCGGCTCTGTGTCACCGAGCTTCTAAAGGGATGGCCGGTGTACCGGGATGCCTCTGAATGGGCCCACTAC CGGAATTGTTTCGCCGAACAGGCTTATATCTTTACTAGTAAGTCCATCATATTTCGCCTCTTTGTCTCCTTTACT CTCTTAGACCTCCCCTCGAAAACATCGTACTGACATGGTTTGCTCAATCTGCAGCATGGAGCGGAGGCATGCCCA TCGACGAATTCATCGAAGTCTCTAAAAAGGGCCGTCGAAATGGCGACCACATCATGCACCGCGAAAACGGCACCC TCGTCGAGCTGAACTCCAAGACCGGCCGTGCTGTAGGTAAAATGAAGGCAACCATCACCCAGCGTTTCTCGTTCG ATGGCGTCGAATTCGACGTCGAATGCGACTGCCGCTTTATCATGTGGTGCCAGAAGGATCCGGCCGGGTGGAAGG TTCACTACAAGCGCTTGTTCTACGAGAAGGATAAGATCATGCCGGTGGATGGCAAGCATGTGCCTGACTACTCGG AGGAGGAGCTCAAGCCGTATCCGTATGGATACAGGTATTTGGGTGCCTCTCAGGCGAGACTGGGGCATAAGATCA AGTTGGATTTGCCGACTATGGAGGACAATGATAAGTTCCGGGGGATGTATGAGGCTATGGAGAAGTGGTTGAGGG GGGAGGATATTAAGGAGACGTTGGGGATTCCTGTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail