Protein ID | Ani_SJS100_1|g1532.t1 |
Gene name | |
Location | scaffold_005:593197..595875 |
Strand | - |
Gene length (bp) | 2678 |
Transcript length (bp) | 2541 |
Coding sequence length (bp) | 2541 |
Protein length (aa) | 847 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13639 | zf-RING_2 | Ring finger domain | 9.6E-13 | 780 | 824 |
PF12678 | zf-rbx1 | RING-H2 zinc finger domain | 1.7E-09 | 781 | 824 |
PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | 1.1E-08 | 780 | 823 |
PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 2.8E-08 | 781 | 823 |
PF17123 | zf-RING_11 | RING-like zinc finger | 2.2E-07 | 781 | 809 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0008270 | zinc ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0046914 | transition metal ion binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 24 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1532.t1 MGQSSSTQRNRRHSTPPEHFPTFHAIRVRRNRDEAMNNSYNTEQTGEHQPRSGTETDHDNTPTALGAPVHLDPSA EIWHPNISGDEQRHMRTIQEENDAQYEPGQREYRSDIFARMAARRQSTMSRLGSRILPNSVIRGLLSSEEETPAE GHAHRHGIVSRSIPRSEATHTSARFSPFNSLSSRSVSRRRSLRGPYFIPRNEPTLSSDPARSGSFLDPTTEIAPE PTRSSWRRSARLHRVRNSLSGPIGHMFGQSFPNASAQESGPIPQPPLDPVSSEDTDGFLPYTRSMDSQMDFDEPH ELDSVEPAVGSTRPTSPMSSQSAQGPPGLRQLPGLLRARPSRAMRREEQTPLSRVLQLAAAAIAAQLSGTAGPVM PNIQALGNDGLDGSLDNFIQSLQHATSTQTAPNEGESAAGDNSPPTPVNFLRVFRFANSDGTRPGGPLNRPTANA ENTDSNGNGMDVDNPTDGPEGRTVTLVVVGVRSVPSGNGPSGDQPANPGTGLDALLRLPFLTPGSLARNHENGSG FPPRPDGRPRLPPIRLQGEQHPSGLPTGSDISSQGGPTPLRRLSDAGTRVPLGSLSAAPSVLSESPPGPHPPPST PAEPGLSAVSSSASTPSRRPSTASAMSPSTLPPIDTNRPMQPTVEPTEDGIPPNTRQRRRSDSEYARHRDLGSGA VRRNGVVEPDNAAPPTGRSWLIYVVGTNLSENHPAFATPSLFTDNPTYEDMILLSSLLGPVKPPVATQEDLSTAG GLFRLVEYAGSLVAEALEGAGAIQLPEGERCLICLSDYEAAEELRQLTKCKHLFHRDCIDQWLTTGRNSCPLCRG QGVAETSNNQPTPDAPSAAAA* |
Coding | >Ani_SJS100_1|g1532.t1 ATGGGACAGTCTTCCTCTACGCAACGAAATCGTCGTCACAGTACCCCTCCAGAGCACTTTCCCACTTTCCACGCG ATCCGTGTCCGCAGAAACAGGGATGAAGCAATGAATAACAGCTACAACACGGAGCAGACTGGGGAACACCAACCC CGGTCGGGAACAGAGACAGACCATGACAACACTCCAACAGCTTTAGGAGCCCCCGTTCATCTCGACCCTTCTGCC GAGATATGGCATCCCAATATTTCAGGTGACGAACAACGACATATGAGAACAATACAAGAGGAGAACGACGCGCAA TATGAGCCGGGCCAGCGGGAATATCGCTCGGACATCTTTGCCCGAATGGCTGCGAGAAGACAGTCAACCATGTCG CGATTGGGTTCCAGGATCCTTCCTAATTCGGTGATCCGTGGCTTGCTGAGCAGCGAAGAAGAAACACCAGCAGAA GGCCACGCCCATCGCCATGGTATCGTGTCAAGGTCGATTCCAAGATCGGAAGCCACGCATACCAGCGCTCGTTTT AGCCCGTTCAATTCCCTCAGCTCGAGAAGCGTCTCTAGGCGACGCTCTTTACGTGGGCCGTACTTCATCCCCCGC AATGAACCAACTCTCTCGTCAGATCCCGCTCGTTCCGGCTCATTCCTCGACCCTACCACGGAGATCGCTCCAGAA CCTACGCGAAGCTCATGGCGCCGCAGTGCTCGGCTGCATCGTGTCCGGAATTCTCTGTCAGGACCCATTGGCCAC ATGTTCGGCCAATCTTTTCCGAACGCATCGGCTCAAGAATCAGGACCAATCCCACAACCACCCCTGGATCCAGTC TCTAGTGAGGACACTGACGGCTTTCTTCCTTATACAAGGTCAATGGATAGCCAGATGGACTTCGATGAGCCCCAT GAGCTTGATTCGGTGGAACCTGCTGTAGGCAGTACTCGTCCTACCTCGCCCATGTCATCGCAGTCTGCACAAGGC CCACCTGGCTTACGGCAACTCCCGGGATTGCTGCGAGCAAGACCGTCTCGAGCTATGCGTCGAGAGGAACAGACT CCTTTGTCGCGTGTCCTTCAGCTGGCCGCTGCCGCCATTGCCGCTCAACTTTCTGGCACAGCTGGTCCCGTAATG CCCAACATCCAGGCTCTGGGCAATGATGGCCTTGATGGTTCGTTGGATAATTTCATACAGAGCTTACAGCACGCC ACGTCCACCCAGACGGCTCCCAACGAGGGAGAGAGTGCGGCAGGCGACAACAGTCCTCCGACTCCGGTTAATTTC CTCAGAGTCTTCCGCTTTGCCAATTCTGACGGTACTCGACCCGGTGGTCCATTGAATCGTCCAACGGCAAACGCT GAGAACACCGACAGCAACGGCAACGGAATGGATGTGGACAACCCTACTGATGGACCTGAGGGACGTACTGTTACG CTCGTGGTGGTTGGAGTACGATCGGTCCCTTCCGGAAATGGGCCTAGCGGCGATCAGCCAGCTAATCCAGGAACT GGACTGGATGCCTTGCTTCGCTTGCCGTTCCTAACGCCGGGGAGTCTAGCACGCAATCACGAGAACGGCTCTGGC TTTCCACCACGTCCAGATGGGCGGCCCAGGCTTCCACCTATCCGGCTCCAGGGCGAGCAGCATCCTAGCGGACTT CCCACGGGTAGTGACATTTCTTCACAAGGAGGACCAACCCCACTGCGGCGGCTGTCTGACGCGGGCACCCGGGTC CCATTAGGCTCACTGTCTGCAGCCCCTTCGGTGCTTTCGGAAAGCCCTCCAGGCCCCCATCCTCCTCCTTCGACG CCAGCCGAGCCGGGATTATCGGCCGTGTCATCTAGCGCGTCCACTCCTAGTCGGAGACCTTCGACTGCTTCGGCC ATGTCACCAAGTACCCTACCCCCCATTGACACCAATCGACCGATGCAGCCCACCGTTGAGCCTACTGAAGACGGT ATCCCCCCGAATACGCGCCAGCGACGTCGCAGTGATTCGGAATATGCGCGCCATCGTGACCTAGGGTCCGGTGCC GTCAGGCGTAACGGCGTTGTGGAACCTGACAATGCTGCACCCCCTACCGGAAGAAGCTGGCTGATCTACGTTGTC GGAACCAATCTTTCAGAGAATCACCCTGCCTTTGCAACGCCAAGTCTGTTCACTGATAATCCAACGTACGAAGAC ATGATCTTGCTCTCATCTCTGCTCGGGCCTGTCAAGCCACCTGTTGCGACCCAGGAAGATCTCTCTACGGCCGGT GGACTGTTCCGCCTTGTAGAGTATGCCGGCTCGCTAGTTGCAGAAGCTTTGGAAGGTGCTGGCGCCATCCAACTT CCCGAAGGCGAGCGGTGCTTGATTTGTCTCAGTGACTACGAGGCGGCAGAGGAGCTTCGGCAACTGACCAAGTGC AAGCATCTTTTCCACCGGGATTGCATTGATCAGTGGTTGACCACGGGCCGTAATTCATGCCCACTTTGCCGAGGC CAGGGTGTGGCTGAGACGTCGAATAACCAACCCACTCCAGATGCACCTAGCGCAGCAGCAGCGTAA |
Transcript | >Ani_SJS100_1|g1532.t1 ATGGGACAGTCTTCCTCTACGCAACGAAATCGTCGTCACAGTACCCCTCCAGAGCACTTTCCCACTTTCCACGCG ATCCGTGTCCGCAGAAACAGGGATGAAGCAATGAATAACAGCTACAACACGGAGCAGACTGGGGAACACCAACCC CGGTCGGGAACAGAGACAGACCATGACAACACTCCAACAGCTTTAGGAGCCCCCGTTCATCTCGACCCTTCTGCC GAGATATGGCATCCCAATATTTCAGGTGACGAACAACGACATATGAGAACAATACAAGAGGAGAACGACGCGCAA TATGAGCCGGGCCAGCGGGAATATCGCTCGGACATCTTTGCCCGAATGGCTGCGAGAAGACAGTCAACCATGTCG CGATTGGGTTCCAGGATCCTTCCTAATTCGGTGATCCGTGGCTTGCTGAGCAGCGAAGAAGAAACACCAGCAGAA GGCCACGCCCATCGCCATGGTATCGTGTCAAGGTCGATTCCAAGATCGGAAGCCACGCATACCAGCGCTCGTTTT AGCCCGTTCAATTCCCTCAGCTCGAGAAGCGTCTCTAGGCGACGCTCTTTACGTGGGCCGTACTTCATCCCCCGC AATGAACCAACTCTCTCGTCAGATCCCGCTCGTTCCGGCTCATTCCTCGACCCTACCACGGAGATCGCTCCAGAA CCTACGCGAAGCTCATGGCGCCGCAGTGCTCGGCTGCATCGTGTCCGGAATTCTCTGTCAGGACCCATTGGCCAC ATGTTCGGCCAATCTTTTCCGAACGCATCGGCTCAAGAATCAGGACCAATCCCACAACCACCCCTGGATCCAGTC TCTAGTGAGGACACTGACGGCTTTCTTCCTTATACAAGGTCAATGGATAGCCAGATGGACTTCGATGAGCCCCAT GAGCTTGATTCGGTGGAACCTGCTGTAGGCAGTACTCGTCCTACCTCGCCCATGTCATCGCAGTCTGCACAAGGC CCACCTGGCTTACGGCAACTCCCGGGATTGCTGCGAGCAAGACCGTCTCGAGCTATGCGTCGAGAGGAACAGACT CCTTTGTCGCGTGTCCTTCAGCTGGCCGCTGCCGCCATTGCCGCTCAACTTTCTGGCACAGCTGGTCCCGTAATG CCCAACATCCAGGCTCTGGGCAATGATGGCCTTGATGGTTCGTTGGATAATTTCATACAGAGCTTACAGCACGCC ACGTCCACCCAGACGGCTCCCAACGAGGGAGAGAGTGCGGCAGGCGACAACAGTCCTCCGACTCCGGTTAATTTC CTCAGAGTCTTCCGCTTTGCCAATTCTGACGGTACTCGACCCGGTGGTCCATTGAATCGTCCAACGGCAAACGCT GAGAACACCGACAGCAACGGCAACGGAATGGATGTGGACAACCCTACTGATGGACCTGAGGGACGTACTGTTACG CTCGTGGTGGTTGGAGTACGATCGGTCCCTTCCGGAAATGGGCCTAGCGGCGATCAGCCAGCTAATCCAGGAACT GGACTGGATGCCTTGCTTCGCTTGCCGTTCCTAACGCCGGGGAGTCTAGCACGCAATCACGAGAACGGCTCTGGC TTTCCACCACGTCCAGATGGGCGGCCCAGGCTTCCACCTATCCGGCTCCAGGGCGAGCAGCATCCTAGCGGACTT CCCACGGGTAGTGACATTTCTTCACAAGGAGGACCAACCCCACTGCGGCGGCTGTCTGACGCGGGCACCCGGGTC CCATTAGGCTCACTGTCTGCAGCCCCTTCGGTGCTTTCGGAAAGCCCTCCAGGCCCCCATCCTCCTCCTTCGACG CCAGCCGAGCCGGGATTATCGGCCGTGTCATCTAGCGCGTCCACTCCTAGTCGGAGACCTTCGACTGCTTCGGCC ATGTCACCAAGTACCCTACCCCCCATTGACACCAATCGACCGATGCAGCCCACCGTTGAGCCTACTGAAGACGGT ATCCCCCCGAATACGCGCCAGCGACGTCGCAGTGATTCGGAATATGCGCGCCATCGTGACCTAGGGTCCGGTGCC GTCAGGCGTAACGGCGTTGTGGAACCTGACAATGCTGCACCCCCTACCGGAAGAAGCTGGCTGATCTACGTTGTC GGAACCAATCTTTCAGAGAATCACCCTGCCTTTGCAACGCCAAGTCTGTTCACTGATAATCCAACGTACGAAGAC ATGATCTTGCTCTCATCTCTGCTCGGGCCTGTCAAGCCACCTGTTGCGACCCAGGAAGATCTCTCTACGGCCGGT GGACTGTTCCGCCTTGTAGAGTATGCCGGCTCGCTAGTTGCAGAAGCTTTGGAAGGTGCTGGCGCCATCCAACTT CCCGAAGGCGAGCGGTGCTTGATTTGTCTCAGTGACTACGAGGCGGCAGAGGAGCTTCGGCAACTGACCAAGTGC AAGCATCTTTTCCACCGGGATTGCATTGATCAGTGGTTGACCACGGGCCGTAATTCATGCCCACTTTGCCGAGGC CAGGGTGTGGCTGAGACGTCGAATAACCAACCCACTCCAGATGCACCTAGCGCAGCAGCAGCGTAA |
Gene | >Ani_SJS100_1|g1532.t1 ATGGGACAGTCTTCCTCTACGCAACGAAATCGTCGTCACAGTACCCCTCCAGAGCACTTTCCCACTTTCCACGCG ATCCGTGTCCGCAGAAACAGGGATGAAGCAATGAATAACAGCTACAACACGGAGCAGACTGGGGAACACCAACCC CGGTCGGGAACAGAGACAGACCATGACAACACTCCAACAGCTTTAGGAGCCCCCGTTCATCTCGACCCTTCTGCC GAGATATGGCATCCCAATATTTCAGGTGACGAACAACGACATATGAGAACAATACAAGAGGAGAACGACGCGCAA TATGAGCCGGGCCAGCGGGAATATCGCTCGGACATCTTTGCCCGAATGGCTGCGAGAAGACAGTCAACCATGTCG CGATTGGGTTCCAGGATCCTTCCTAATTCGGTGATCCGTGGCTTGCTGAGCAGCGAAGAAGAAACACCAGCAGAA GGCCACGCCCATCGCCATGGTATCGTGTCAAGGTCGATTCCAAGATCGGAAGCCACGCATACCAGCGCTCGTTTT AGCCCGTTCAATTCCCTCAGCTCGAGAAGCGTCTCTAGGCGACGCTCTTTACGTGGGCCGTACTTCATCCCCCGC AATGAACCAACTCTCTCGTCAGATCCCGCTCGTTCCGGCTCATTCCTCGACCCTACCACGGAGATCGCTCCAGAA CCTACGCGAAGCTCATGGCGCCGCAGTGCTCGGCTGCATCGTGTCCGGAATTCTCTGTCAGGACCCATTGGCCAC ATGTTCGGCCAATCTTTTCCGAACGCATCGGCTCAAGAATCAGGACCAATCCCACAACCACCCCTGGATCCAGTC TCTAGTGAGGACACTGACGGCTTTCTTCCTTATACAAGGTCAATGGATAGCCAGATGGACTTCGATGAGCCCCAT GAGCTTGATTCGGTGGAACCTGCTGTAGGCAGTACTCGTCCTACCTCGCCCATGTCATCGCAGTCTGCACAAGGC CCACCTGGCTTACGGCAACTCCCGGGATTGCTGCGAGCAAGACCGTCTCGAGCTATGCGTCGAGAGGAACAGACT CCTTTGTCGCGTGTCCTTCAGCTGGCCGCTGCCGCCATTGCCGCTCAACTTTCTGGCACAGCTGGTCCCGTAATG CCCAACATCCAGGCTCTGGGCAATGATGGCCTTGATGGTTCGTTGGATAATTTCATACAGAGCTTACAGCACGCC ACGTCCACCCAGACGGCTCCCAACGAGGGAGAGAGTGCGGCAGGCGACAACAGTCCTCCGACTCCGGTTAATTTC CTCAGAGTCTTCCGCTTTGCCAATTCTGACGGTACTCGACCCGGTGGTCCATTGAATCGTCCAACGGCAAACGCT GAGAACACCGACAGCAACGGCAACGGAATGGATGTGGACAACCCTACTGATGGACCTGAGGGACGTACTGTTACG CTCGTGGTGGTTGGAGTACGATCGGTCCCTTCCGGAAATGGGCCTAGCGGCGATCAGCCAGCTAATCCAGGAACT GGACTGGATGCCTTGCTTCGCTTGCCGTTCCTAACGCCGGGGAGTCTAGCACGCAATCACGAGAACGGCTCTGGC TTTCCACCACGTCCAGATGGGCGGCCCAGGCTTCCACCTATCCGGCTCCAGGGCGAGCAGCATCCTAGCGGACTT CCCACGGGTAGTGACATTTCTTCACAAGGAGGACCAACCCCACTGCGGCGGCTGTCTGACGCGGGCACCCGGGTC CCATTAGGCTCACTGTCTGCAGCCCCTTCGGTGCTTTCGGAAAGCCCTCCAGGCCCCCATCCTCCTCCTTCGACG CCAGCCGAGCCGGGATTATCGGCCGTGTCATCTAGCGCGTCCACTCCTAGTCGGAGACCTTCGACTGCTTCGGCC ATGTCACCAAGTACCCTACCCCCCATTGACACCAATCGACCGATGCAGCCCACCGTTGAGCCTACTGAAGACGGT ATCCCCCCGAATACGCGCCAGCGACGTCGCAGTGATTCGGAATATGCGCGCCATCGTGACCTAGGGTCCGGTGCC GTCAGGCGTAACGGCGTTGTGGAACCTGACAATGCTGCACCCCCTACCGGAAGAAGCTGGCTGATCTACGTTGTC GGAACCAATCTTTCAGAGAATCACCCTGCCTTTGCAACGCCAAGTCTGTTCACTGATGTAAGAAATCCCAAGTCT AAAATCGTTTTCCTCCCCAGCCTCTTTCTCTGTTTGGTACGTTTTTGTGGCTAATAGGGTCTTTAGAATCCAACG TACGAAGACATGATCTTGCTCTCATCTCTGCTCGGGCCTGTCAAGCCACCTGTTGCGACCCAGGAAGATCTCTCT ACGGCCGGTGGACTGTTCCGCCTTGTAGAGTATGCCGGCTCGCTAGTTGCAGAAGCTTTGGAAGGTGCTGGCGCC ATCCAACTTCCCGAAGGCGAGCGGTGCTTGATTTGTCTCAGTGACTACGAGGCGGCAGAGGAGCTTCGGCAACTG ACCAAGTGCAAGCATCTTTTCCACCGGGATTGCATTGATCAGGTTTGTGCATATATCTCCGCGGATGTTTTGGCA CTCAACTGACATTATGCTAGTGGTTGACCACGGGCCGTAATTCATGCCCACTTTGCCGAGGCCAGGGTGTGGCTG AGACGTCGAATAACCAACCCACTCCAGATGCACCTAGCGCAGCAGCAGCGTAA |