Protein ID | Ani_SJS100_1|g1513.t1 |
Gene name | |
Location | scaffold_005:517550..520880 |
Strand | + |
Gene length (bp) | 3330 |
Transcript length (bp) | 3021 |
Coding sequence length (bp) | 3021 |
Protein length (aa) | 1007 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00013 | KH_1 | KH domain | 6.1E-08 | 284 | 351 |
PF00013 | KH_1 | KH domain | 5.9E-07 | 574 | 624 |
PF00013 | KH_1 | KH domain | 2.5E-05 | 678 | 719 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003723 | RNA binding | Yes |
GO:0003676 | nucleic acid binding | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1513.t1 MHKISNFTGQARHGWERMTPTFGMSRPHTDMTSHSLRRPHGAPPMTPPTGIDPTVNLSFNVPFSSTLAGPDVDDV LHASPGALQRWTFPEGTPEGTPVHQLPVHASNVDALRRLCRQITESSNGRVEAAVTSSEPKTVPSLQRRPQGLAT NVCITGDGETVRKMRARVLNETPILLRCATVDVDMHLILDGTTKNIRASVLEHLDTLAAYTGTDIFLLSPKIRDT DSAVVSSYGYASDNGLDQRFRVSIYGDMESAEHAKTRVLIMIDQILKRHVDAVKLELTMHTLVCGRTRKNIKLIE AATGTAIYFPPPFPRIFGYTPPGAHRRSENEVYITGDTQEQIARAKQKLQELVMGVKIYVKDVIVNSNKIDNILL DRLDKVRKVMEMNGSYVLFPQLGTQRGLVRIQGTEVLHVERTVREIMALAGQFYSASWWIIMPDPSQGGFRAPSP ADVRTMLSDICSNSGAEVSFDNLTFTINGSDDAVKAAMMVINQIPFVQRSQYQMRVKIELANEHKEFVSGKKNGK INKIMGQSNVQIIFDGFNEYNFYIDVCGNQYESTKNGLDLVEQEMPASISFHVPDQYHKRIIGIGGQHIQRIMKK YSVFVKFSNAMDRGGMGKEEDDIKVDNVICRTPARNAQSLDLVKQEIMDMVEKVDAEYVSERVVINRLYHRELLA RMSEIDELEKKWNCKIEFPSTELASDVVTISGPEYQVPQAVDALLGMVPESHELLFQSSAELREYFKSTEFHDDV CAKLKDQYEVDTTVDTSSDPPASASESGSSSPVFGPEDRVVLGYTRNNAGGLKDAIDFLISRLVAHGLDATTVKG AIPRPKSDSFEESLPFFDSKLLQHAPAPIVTDSPTRPSFSDETSERGSIFERLRKPGSISSFSSFIGRKNHSASP GSFFKHASSNASKASLVSMESRDSGYRNPWNDSGVNLAEDDVPVLGSSHSHSSSNGWPARFDTKFPFGTAPGDMT PKHDPRASFDSGRPSTSNSTSGYPAPIGPPR* |
Coding | >Ani_SJS100_1|g1513.t1 ATGCACAAGATTTCCAATTTTACGGGCCAGGCCCGTCATGGCTGGGAGCGAATGACGCCCACCTTTGGCATGTCT CGACCGCATACCGACATGACTTCTCACTCTCTCCGTCGACCGCATGGCGCGCCGCCCATGACTCCTCCGACCGGC ATCGACCCGACCGTCAATCTCTCGTTCAACGTGCCCTTCTCCTCGACTCTTGCCGGTCCCGACGTCGACGATGTC CTGCATGCGAGCCCTGGCGCCCTTCAACGTTGGACCTTCCCCGAGGGCACTCCCGAAGGCACCCCCGTCCACCAG CTTCCGGTTCACGCGAGCAATGTCGACGCCCTGCGGAGATTGTGTCGACAAATCACCGAAAGCAGTAACGGGAGG GTCGAGGCGGCTGTGACCTCCTCGGAGCCCAAGACTGTTCCTTCGCTACAACGGCGCCCCCAGGGTTTGGCGACC AATGTCTGCATCACGGGTGATGGAGAGACGGTGCGGAAGATGCGAGCGAGGGTGTTGAACGAGACCCCGATCTTG TTGCGATGTGCGACCGTGGATGTGGACATGCACCTGATCCTGGACGGAACCACCAAGAATATCCGAGCGAGCGTC TTGGAGCATCTGGATACGCTGGCGGCGTATACGGGCACGGATATCTTCCTCCTGAGCCCCAAAATCCGTGACACG GATAGTGCGGTGGTGTCTTCTTATGGCTACGCTTCAGATAATGGGCTGGATCAACGCTTCCGGGTGTCCATCTAC GGCGATATGGAGAGCGCTGAGCATGCCAAGACCAGGGTCTTGATTATGATCGATCAGATTCTTAAACGTCACGTG GATGCCGTGAAGCTGGAGCTGACCATGCACACCTTGGTCTGCGGCCGTACTCGCAAGAACATCAAGCTGATTGAG GCGGCCACTGGCACGGCCATTTACTTCCCGCCGCCATTTCCCCGCATTTTCGGCTACACGCCGCCGGGTGCTCAC CGTCGCAGCGAGAACGAGGTCTACATTACCGGTGATACGCAGGAGCAGATTGCACGTGCGAAGCAAAAGCTTCAG GAACTGGTGATGGGCGTGAAGATCTATGTCAAGGATGTCATTGTCAACTCGAACAAGATCGACAACATTCTGCTC GACCGTCTGGACAAGGTCCGGAAGGTGATGGAGATGAACGGCTCCTACGTCCTCTTCCCTCAGCTGGGTACGCAG CGCGGTCTGGTTCGCATCCAGGGCACCGAAGTGTTGCACGTCGAGCGCACCGTGCGGGAGATCATGGCTTTGGCT GGTCAATTTTACAGCGCATCGTGGTGGATCATTATGCCCGACCCGTCGCAAGGGGGTTTCCGGGCGCCGTCTCCC GCAGACGTCCGCACCATGCTATCCGACATTTGCAGCAACTCGGGCGCTGAAGTCAGCTTTGACAACCTGACCTTC ACCATCAACGGCTCGGATGACGCGGTCAAGGCAGCAATGATGGTGATCAACCAGATCCCTTTTGTGCAGCGCAGC CAGTACCAGATGCGCGTGAAGATCGAACTCGCCAACGAGCACAAGGAATTCGTCAGCGGCAAGAAGAACGGAAAG ATCAACAAGATCATGGGCCAGAGCAACGTGCAAATCATCTTCGATGGTTTCAACGAGTACAACTTCTACATTGAC GTGTGTGGAAACCAGTACGAGTCCACCAAGAATGGCTTGGATCTTGTTGAACAGGAAATGCCGGCGTCGATCTCA TTCCACGTACCAGACCAGTACCACAAGCGCATCATCGGCATTGGCGGCCAGCACATCCAGCGCATCATGAAGAAA TACTCGGTGTTTGTCAAGTTCTCCAACGCCATGGACCGTGGTGGCATGGGCAAGGAGGAGGATGACATCAAGGTT GACAATGTCATTTGCCGGACCCCTGCCCGTAACGCCCAGAGTCTGGACCTGGTCAAGCAGGAGATTATGGACATG GTCGAGAAAGTCGATGCCGAGTATGTCTCCGAACGTGTCGTCATCAACCGGTTGTATCACCGTGAACTACTTGCG CGCATGTCCGAAATCGATGAGCTCGAGAAGAAGTGGAACTGCAAGATCGAGTTCCCTAGTACCGAACTTGCCAGT GACGTCGTGACTATTTCCGGACCCGAGTACCAGGTCCCACAGGCCGTTGACGCCTTACTGGGAATGGTTCCGGAG AGCCACGAGCTACTCTTCCAGAGCTCCGCCGAGCTGCGCGAGTACTTCAAATCGACCGAGTTCCACGACGACGTG TGTGCCAAGCTCAAGGACCAATACGAGGTCGATACCACCGTTGATACTAGTTCGGACCCTCCGGCCTCGGCTTCG GAGAGTGGCTCTTCTTCGCCCGTCTTCGGGCCGGAAGACCGGGTTGTGCTCGGATATACTCGCAACAATGCCGGC GGACTCAAGGATGCCATTGACTTCCTGATCTCCCGATTGGTCGCTCACGGCCTTGACGCAACTACGGTCAAGGGA GCTATTCCCCGTCCCAAGTCGGACTCTTTTGAAGAGTCTCTCCCCTTCTTTGACTCCAAGTTGCTGCAGCATGCG CCTGCTCCCATCGTCACCGACTCCCCCACTCGACCCAGTTTCTCGGATGAGACCAGCGAGCGCGGGTCCATCTTT GAGAGACTGCGGAAGCCTGGCAGCATCTCTTCCTTTTCTTCGTTCATTGGCCGCAAGAATCACTCGGCCTCCCCC GGATCGTTCTTTAAGCATGCCTCCAGTAACGCCTCGAAGGCGTCACTGGTCTCCATGGAGTCTCGAGACAGTGGC TACCGCAACCCATGGAATGATTCTGGCGTGAACCTTGCCGAGGACGACGTGCCTGTCCTCGGAAGTTCTCACAGC CACAGCAGCAGCAATGGCTGGCCCGCGCGCTTTGACACCAAATTTCCATTCGGTACCGCGCCAGGGGACATGACT CCCAAGCATGACCCGCGCGCTTCTTTTGACAGTGGTCGTCCTAGTACTTCCAATTCTACTTCTGGATACCCGGCC CCAATCGGGCCACCGCGTTAA |
Transcript | >Ani_SJS100_1|g1513.t1 ATGCACAAGATTTCCAATTTTACGGGCCAGGCCCGTCATGGCTGGGAGCGAATGACGCCCACCTTTGGCATGTCT CGACCGCATACCGACATGACTTCTCACTCTCTCCGTCGACCGCATGGCGCGCCGCCCATGACTCCTCCGACCGGC ATCGACCCGACCGTCAATCTCTCGTTCAACGTGCCCTTCTCCTCGACTCTTGCCGGTCCCGACGTCGACGATGTC CTGCATGCGAGCCCTGGCGCCCTTCAACGTTGGACCTTCCCCGAGGGCACTCCCGAAGGCACCCCCGTCCACCAG CTTCCGGTTCACGCGAGCAATGTCGACGCCCTGCGGAGATTGTGTCGACAAATCACCGAAAGCAGTAACGGGAGG GTCGAGGCGGCTGTGACCTCCTCGGAGCCCAAGACTGTTCCTTCGCTACAACGGCGCCCCCAGGGTTTGGCGACC AATGTCTGCATCACGGGTGATGGAGAGACGGTGCGGAAGATGCGAGCGAGGGTGTTGAACGAGACCCCGATCTTG TTGCGATGTGCGACCGTGGATGTGGACATGCACCTGATCCTGGACGGAACCACCAAGAATATCCGAGCGAGCGTC TTGGAGCATCTGGATACGCTGGCGGCGTATACGGGCACGGATATCTTCCTCCTGAGCCCCAAAATCCGTGACACG GATAGTGCGGTGGTGTCTTCTTATGGCTACGCTTCAGATAATGGGCTGGATCAACGCTTCCGGGTGTCCATCTAC GGCGATATGGAGAGCGCTGAGCATGCCAAGACCAGGGTCTTGATTATGATCGATCAGATTCTTAAACGTCACGTG GATGCCGTGAAGCTGGAGCTGACCATGCACACCTTGGTCTGCGGCCGTACTCGCAAGAACATCAAGCTGATTGAG GCGGCCACTGGCACGGCCATTTACTTCCCGCCGCCATTTCCCCGCATTTTCGGCTACACGCCGCCGGGTGCTCAC CGTCGCAGCGAGAACGAGGTCTACATTACCGGTGATACGCAGGAGCAGATTGCACGTGCGAAGCAAAAGCTTCAG GAACTGGTGATGGGCGTGAAGATCTATGTCAAGGATGTCATTGTCAACTCGAACAAGATCGACAACATTCTGCTC GACCGTCTGGACAAGGTCCGGAAGGTGATGGAGATGAACGGCTCCTACGTCCTCTTCCCTCAGCTGGGTACGCAG CGCGGTCTGGTTCGCATCCAGGGCACCGAAGTGTTGCACGTCGAGCGCACCGTGCGGGAGATCATGGCTTTGGCT GGTCAATTTTACAGCGCATCGTGGTGGATCATTATGCCCGACCCGTCGCAAGGGGGTTTCCGGGCGCCGTCTCCC GCAGACGTCCGCACCATGCTATCCGACATTTGCAGCAACTCGGGCGCTGAAGTCAGCTTTGACAACCTGACCTTC ACCATCAACGGCTCGGATGACGCGGTCAAGGCAGCAATGATGGTGATCAACCAGATCCCTTTTGTGCAGCGCAGC CAGTACCAGATGCGCGTGAAGATCGAACTCGCCAACGAGCACAAGGAATTCGTCAGCGGCAAGAAGAACGGAAAG ATCAACAAGATCATGGGCCAGAGCAACGTGCAAATCATCTTCGATGGTTTCAACGAGTACAACTTCTACATTGAC GTGTGTGGAAACCAGTACGAGTCCACCAAGAATGGCTTGGATCTTGTTGAACAGGAAATGCCGGCGTCGATCTCA TTCCACGTACCAGACCAGTACCACAAGCGCATCATCGGCATTGGCGGCCAGCACATCCAGCGCATCATGAAGAAA TACTCGGTGTTTGTCAAGTTCTCCAACGCCATGGACCGTGGTGGCATGGGCAAGGAGGAGGATGACATCAAGGTT GACAATGTCATTTGCCGGACCCCTGCCCGTAACGCCCAGAGTCTGGACCTGGTCAAGCAGGAGATTATGGACATG GTCGAGAAAGTCGATGCCGAGTATGTCTCCGAACGTGTCGTCATCAACCGGTTGTATCACCGTGAACTACTTGCG CGCATGTCCGAAATCGATGAGCTCGAGAAGAAGTGGAACTGCAAGATCGAGTTCCCTAGTACCGAACTTGCCAGT GACGTCGTGACTATTTCCGGACCCGAGTACCAGGTCCCACAGGCCGTTGACGCCTTACTGGGAATGGTTCCGGAG AGCCACGAGCTACTCTTCCAGAGCTCCGCCGAGCTGCGCGAGTACTTCAAATCGACCGAGTTCCACGACGACGTG TGTGCCAAGCTCAAGGACCAATACGAGGTCGATACCACCGTTGATACTAGTTCGGACCCTCCGGCCTCGGCTTCG GAGAGTGGCTCTTCTTCGCCCGTCTTCGGGCCGGAAGACCGGGTTGTGCTCGGATATACTCGCAACAATGCCGGC GGACTCAAGGATGCCATTGACTTCCTGATCTCCCGATTGGTCGCTCACGGCCTTGACGCAACTACGGTCAAGGGA GCTATTCCCCGTCCCAAGTCGGACTCTTTTGAAGAGTCTCTCCCCTTCTTTGACTCCAAGTTGCTGCAGCATGCG CCTGCTCCCATCGTCACCGACTCCCCCACTCGACCCAGTTTCTCGGATGAGACCAGCGAGCGCGGGTCCATCTTT GAGAGACTGCGGAAGCCTGGCAGCATCTCTTCCTTTTCTTCGTTCATTGGCCGCAAGAATCACTCGGCCTCCCCC GGATCGTTCTTTAAGCATGCCTCCAGTAACGCCTCGAAGGCGTCACTGGTCTCCATGGAGTCTCGAGACAGTGGC TACCGCAACCCATGGAATGATTCTGGCGTGAACCTTGCCGAGGACGACGTGCCTGTCCTCGGAAGTTCTCACAGC CACAGCAGCAGCAATGGCTGGCCCGCGCGCTTTGACACCAAATTTCCATTCGGTACCGCGCCAGGGGACATGACT CCCAAGCATGACCCGCGCGCTTCTTTTGACAGTGGTCGTCCTAGTACTTCCAATTCTACTTCTGGATACCCGGCC CCAATCGGGCCACCGCGTTAA |
Gene | >Ani_SJS100_1|g1513.t1 ATGCACAAGATTTCCAATTTTACGGGCCAGGCCCGTCATGGCTGGGAGCGAATGACGCCCACCTTTGGCATGTCT CGACCGCATACCGACATGACTTCTCACTCTCTCCGTCGACCGCATGGCGCGCCGCCCATGACTCCTCCGACCGGC ATCGACCCGACCGTCAATCTCTCGTTCAACGTGCCCTTCTCCTCGACTCTTGCCGGTCCCGACGTCGACGATGTC CTGCATGCGAGCCCTGGCGCCCTTCAACGTTGGACCTTCCCCGAGGGCACTCCCGAAGGCACCCCCGTCCACCAG CTTCCGGTTCACGCGAGCAATGTCGACGCCCTGCGGAGATTGTGTCGACAAATCACCGAAAGCAGTAACGGGAGG GTCGAGGCGGCTGTGACCTCCTCGGAGCCCAAGACTGTTCCTTCGCTACAACGGCGCCCCCAGGGTTTGGCGACC AATGTCTGCATCACGGGTGATGGAGAGACGGTGCGGAAGATGCGAGCGAGGGTGTTGAACGAGACCCCGATCTTG TTGGTATGTTGAAATATTTTCATGTTATGGTACTTGGATCCCGTTATATCCGCTAACGGGTCATGTTATAGCGAT GTGCGACCGTGGATGTGGACATGCACCTGATCCTGGACGGAACCACCAAGAATATCCGAGCGAGCGTCTTGGAGC ATCTGGATACGCTGGCGGCGTATACGGGCACGGATATCTTCCTCCTGAGCCCCAAAATCCGTGACACGGATAGTG CGGTGGTGTCTTCTTATGGCTACGCTTCAGATAATGGGCTGGATCAACGCTTCCGGGTGTCCATCTACGGCGATA TGGAGAGCGCTGAGCATGCCAAGACCAGGGTCTTGATTATGATCGATCAGATTGTGGGTTCTTTCTTCCGACCGA TCAACGTCCTGGAAACTAACTGCTACTAGCTTAAACGTCACGTGGATGCCGTGAAGCTGGAGCTGACCATGCACA CCTTGGTCTGCGGCCGTACTCGCAAGAACATCAAGCTGATTGAGGCGGCCACTGGCACGGCCATTTACTTCCCGC CGCCATTTCCCCGCATTTTCGGCTACACGCCGCCGGGTGCTCACCGTCGCAGCGAGAACGAGGTCTACATTACCG GTGATACGCAGGAGCAGATTGCACGTGCGAAGCAAAAGCTTCAGGAACTGGTGATGGGCGTGAAGATCTATGTCA AGGATGTCATTGTCAACTCGAACAAGATCGACAACATTCTGCTCGACCGTCTGGACAAGGTCCGGAAGGTGATGG AGATGAACGGCTCCTACGTCCTCTTCCCTCAGCTGGGTACGCAGCGCGGTCTGGTTCGCATCCAGGGCACCGAAG TGTTGCACGTCGAGCGCACCGTGCGGGAGATCATGGCTTTGGTAGGGTTACTCTACGCGTAGACTGCTTTGTGTC TGGACTAACGTTTGCAGGCTGGTCAATTTTACAGCGCATCGTGGTGGATCATTATGCCCGACCCGTCGCAAGGGG GTTTCCGGGCGCCGTCTCCCGCAGACGTCCGCACCATGCTATCCGACATTTGCAGCAACTCGGGCGCTGAAGTCA GCTTTGACAACCTGACCTTCACCATCAACGGCTCGGATGACGCGGTCAAGGCAGCAATGATGGTGATCAACCAGA TCCCTTTTGTGCAGCGCAGCCAGTACCAGATGCGCGTGAAGATCGAACTCGCCAACGAGCACAAGGAATTCGTCA GCGGCAAGAAGAACGGAAAGATCAACAAGATCATGGGCCAGAGTGAGTTTGCCGTATTCGCCACATGATCCCATA TTAACGTATACAGGCAACGTGCAAATCATCTTCGATGGTTTCAACGAGTACAACTTCTACATTGACGTGTGTGGA AACCAGTACGAGTCCACCAAGAATGGCTTGGATCTTGTTGAACAGGAAATGCCGGCGTCGATCTCATTCCACGTA CCAGACCAGTACCACAAGCGCATCATCGGCATTGGCGGCCAGCACATCCAGCGCATCATGAAGAAATACTCGGTG TTTGTCAAGTTCTCCAACGCCATGGACCGTGGTGGCATGGGCAAGGAGGAGGATGACATCAAGGTTGACAATGTC ATTTGCCGGACCCCTGCCCGTAACGCCCAGAGTCTGGACCTGGTCAAGCAGGAGATTATGGACATGGTCGAGAAA GTCGTAAGTCCGGCCATTCCCGTTTTGAGTGTCGTTGCTAATTGGACAGGATGCCGAGTATGTCTCCGAACGTGT CGTCATCAACCGGTTGTATCACCGTGAACTACTTGCGCGCATGTCCGAAATCGATGAGCTCGAGAAGAAGTGGAA CTGCAAGATCGAGTTCCCTAGTACCGAACTTGCCAGTGACGTCGTGACTATTTCCGGACCCGAGTACCAGGTCCC ACAGGCCGTTGACGCCTTACTGGTAAGTAGACCGCCGAGTATGGATATCATCAGTTCTAACCTTAGCAGGGAATG GTTCCGGAGAGCCACGAGCTACTCTTCCAGAGCTCCGCCGAGCTGCGCGAGTACTTCAAATCGACCGAGTTCCAC GACGACGTGTGTGCCAAGCTCAAGGACCAATACGAGGTCGATACCACCGTTGATACTAGTTCGGACCCTCCGGCC TCGGCTTCGGAGAGTGGCTCTTCTTCGCCCGTCTTCGGGCCGGAAGACCGGGTTGTGCTCGGATATACTCGCAAC AATGCCGGCGGACTCAAGGATGCCATTGACTTCCTGATCTCCCGATTGGTCGCTCACGGCCTTGACGCAACTACG GTCAAGGGAGCTATTCCCCGTCCCAAGTCGGACTCTTTTGAAGAGTCTCTCCCCTTCTTTGACTCCAAGTTGCTG CAGCATGCGCCTGCTCCCATCGTCACCGACTCCCCCACTCGACCCAGTTTCTCGGATGAGACCAGCGAGCGCGGG TCCATCTTTGAGAGACTGCGGAAGCCTGGCAGCATCTCTTCCTTTTCTTCGTTCATTGGCCGCAAGAATCACTCG GCCTCCCCCGGATCGTTCTTTAAGCATGCCTCCAGTAACGCCTCGAAGGCGTCACTGGTCTCCATGGAGTCTCGA GACAGTGGCTACCGCAACCCATGGAATGATTCTGGCGTGAACCTTGCCGAGGACGACGTGCCTGTCCTCGGAAGT TCTCACAGCCACAGCAGCAGCAATGGCTGGCCCGCGCGCTTTGACACCAAATTTCCATTCGGTACCGCGCCAGGG GACATGACTCCCAAGCATGACCCGCGCGCTTCTTTTGACAGTGGTCGTCCTAGTACTTCCAATTCTACTTCTGGA TACCCGGCCCCAATCGGGCCACCGCGTTAA |