Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1502.t1
Gene name
Locationscaffold_005:472873..474509
Strand+
Gene length (bp)1636
Transcript length (bp)1437
Coding sequence length (bp)1437
Protein length (aa) 479

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03348 Serinc Serine incorporator (Serinc) 5.3E-177 24 474

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 49 71 22
3 95 117 22
4 137 156 19
5 161 183 22
6 204 226 22
7 236 258 22
8 265 287 22
9 302 321 19
10 407 429 22
11 444 466 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1502.t1
MGALLSLPLLALPSASTLITLATSCCGAATCSAVCSACGKFQNSMATRIAYAFILLFNSIISWIMLTPWALKKLQ
HMTLDYMEIRCDGKECYGWVAVHRINFGLGLFHLILAFMLLGVRSSKDGRAVLQNGFWGPKIILWLALVVASFFI
PESFFFVYGHYIAFICAMLFLLLGLILLVDLAHSWAELCLQKIEDSDSRTWRGLLIGSTVGMYVASLVMTVLMYV
FFAHSGCAMNQAAITINLVVFLIISIISVQPMVQESNPRAGLAQAAMVTIYCTYLTMSAVSMEPDDRHCNPLIRA
RGTRTASIVLGAIVTMATIAYTTTRAATQGIALGSQGGHNYSQLGSDDNEHGLVTQQPTTRREMRAEALRAAVES
GALPASALDDSDDESDEYDTKDDEKGSTQYNYSLFHIIFFLATTWVATLLTQNLDPEAVDDFAPVGRTYWASWVK
IISAWVCYGIYLWTLIAPVVLPDRFDTY*
Coding >Ani_SJS100_1|g1502.t1
ATGGGTGCCCTCTTATCTCTGCCTCTGCTGGCTCTTCCCAGCGCCAGCACGCTCATCACCCTCGCGACATCGTGC
TGCGGCGCAGCGACCTGCTCGGCAGTATGTAGTGCATGCGGGAAGTTTCAGAACAGTATGGCTACGAGAATCGCC
TATGCCTTCATCCTCTTGTTCAATTCGATCATCTCCTGGATAATGCTCACGCCATGGGCGCTCAAAAAGTTACAA
CACATGACGCTAGATTACATGGAAATCAGATGCGACGGGAAAGAATGTTATGGTTGGGTGGCCGTTCATCGAATC
AATTTTGGTCTTGGGCTCTTCCATTTGATCCTTGCCTTCATGCTGCTTGGAGTCAGGTCCTCCAAAGATGGCCGT
GCGGTCCTTCAGAATGGGTTCTGGGGTCCCAAGATCATTCTGTGGCTTGCGCTCGTTGTGGCATCATTCTTCATC
CCCGAGTCGTTCTTCTTCGTCTACGGTCACTATATCGCCTTTATCTGCGCCATGCTGTTCCTTCTGCTGGGTCTA
ATTCTCTTGGTGGATCTGGCGCATTCATGGGCGGAATTGTGCCTGCAGAAGATTGAAGATAGTGATTCACGCACG
TGGCGTGGCCTTCTGATAGGCTCTACTGTGGGCATGTACGTTGCATCTCTCGTCATGACGGTCTTGATGTATGTC
TTTTTTGCCCACAGCGGATGCGCCATGAACCAGGCTGCGATTACTATTAATCTTGTTGTCTTCCTTATTATTTCG
ATCATCTCGGTGCAGCCCATGGTGCAGGAATCCAACCCCAGAGCAGGATTGGCCCAGGCCGCCATGGTTACAATT
TATTGCACCTATCTCACCATGTCCGCGGTGTCCATGGAGCCAGATGACCGTCACTGTAACCCTCTGATTCGTGCG
CGAGGCACCAGAACGGCTAGTATCGTTTTGGGCGCGATTGTCACTATGGCTACCATCGCGTATACGACCACCCGC
GCGGCCACCCAGGGCATTGCGCTAGGCTCCCAAGGGGGGCACAACTACTCGCAGCTGGGATCGGATGACAACGAG
CATGGTCTTGTGACCCAGCAGCCAACCACTCGCCGCGAGATGCGGGCCGAGGCTCTTCGGGCGGCTGTTGAGAGT
GGCGCTTTGCCCGCCAGTGCGCTGGATGACAGCGACGACGAATCCGACGAGTATGACACCAAGGACGACGAAAAG
GGATCGACGCAGTATAATTACTCTTTGTTCCATATCATCTTCTTCCTGGCGACCACCTGGGTCGCTACCTTGCTG
ACCCAGAACTTGGACCCGGAGGCCGTCGACGACTTTGCGCCCGTTGGCCGCACCTACTGGGCCAGCTGGGTGAAG
ATCATTAGTGCCTGGGTGTGCTATGGAATTTACCTGTGGACCCTGATCGCACCGGTGGTTCTGCCGGACCGCTTT
GACACCTACTGA
Transcript >Ani_SJS100_1|g1502.t1
ATGGGTGCCCTCTTATCTCTGCCTCTGCTGGCTCTTCCCAGCGCCAGCACGCTCATCACCCTCGCGACATCGTGC
TGCGGCGCAGCGACCTGCTCGGCAGTATGTAGTGCATGCGGGAAGTTTCAGAACAGTATGGCTACGAGAATCGCC
TATGCCTTCATCCTCTTGTTCAATTCGATCATCTCCTGGATAATGCTCACGCCATGGGCGCTCAAAAAGTTACAA
CACATGACGCTAGATTACATGGAAATCAGATGCGACGGGAAAGAATGTTATGGTTGGGTGGCCGTTCATCGAATC
AATTTTGGTCTTGGGCTCTTCCATTTGATCCTTGCCTTCATGCTGCTTGGAGTCAGGTCCTCCAAAGATGGCCGT
GCGGTCCTTCAGAATGGGTTCTGGGGTCCCAAGATCATTCTGTGGCTTGCGCTCGTTGTGGCATCATTCTTCATC
CCCGAGTCGTTCTTCTTCGTCTACGGTCACTATATCGCCTTTATCTGCGCCATGCTGTTCCTTCTGCTGGGTCTA
ATTCTCTTGGTGGATCTGGCGCATTCATGGGCGGAATTGTGCCTGCAGAAGATTGAAGATAGTGATTCACGCACG
TGGCGTGGCCTTCTGATAGGCTCTACTGTGGGCATGTACGTTGCATCTCTCGTCATGACGGTCTTGATGTATGTC
TTTTTTGCCCACAGCGGATGCGCCATGAACCAGGCTGCGATTACTATTAATCTTGTTGTCTTCCTTATTATTTCG
ATCATCTCGGTGCAGCCCATGGTGCAGGAATCCAACCCCAGAGCAGGATTGGCCCAGGCCGCCATGGTTACAATT
TATTGCACCTATCTCACCATGTCCGCGGTGTCCATGGAGCCAGATGACCGTCACTGTAACCCTCTGATTCGTGCG
CGAGGCACCAGAACGGCTAGTATCGTTTTGGGCGCGATTGTCACTATGGCTACCATCGCGTATACGACCACCCGC
GCGGCCACCCAGGGCATTGCGCTAGGCTCCCAAGGGGGGCACAACTACTCGCAGCTGGGATCGGATGACAACGAG
CATGGTCTTGTGACCCAGCAGCCAACCACTCGCCGCGAGATGCGGGCCGAGGCTCTTCGGGCGGCTGTTGAGAGT
GGCGCTTTGCCCGCCAGTGCGCTGGATGACAGCGACGACGAATCCGACGAGTATGACACCAAGGACGACGAAAAG
GGATCGACGCAGTATAATTACTCTTTGTTCCATATCATCTTCTTCCTGGCGACCACCTGGGTCGCTACCTTGCTG
ACCCAGAACTTGGACCCGGAGGCCGTCGACGACTTTGCGCCCGTTGGCCGCACCTACTGGGCCAGCTGGGTGAAG
ATCATTAGTGCCTGGGTGTGCTATGGAATTTACCTGTGGACCCTGATCGCACCGGTGGTTCTGCCGGACCGCTTT
GACACCTACTGA
Gene >Ani_SJS100_1|g1502.t1
ATGGGTGCCCTCTTATCTCTGCCTCTGCTGGCTCTTCCCAGCGCCAGCACGGTACGTGCGCCTCCATCACCGCCA
TCTAATCCCCCCACTGACATCAAGGTAGCTCATCACCCTCGCGACATCGTGCTGCGGCGCAGCGACCTGCTCGGC
AGTATGTAGTGCATGCGGGAAGTTTCAGAACAGGTTAGCGACATCCAAACAGAAAACAAGCCTCACGCGCCATAA
TGATGGACCTGGCTGACATTAGGCACCAACTAACAGTATGGCTACGAGAATCGCCTATGCCTTCATCCTCTTGTT
CAATTCGATCATCTCCTGGATAATGCTCACGCCATGGGCGCTCAAAAAGTTACAACACATGACGCTAGATTACAT
GGAAATCAGATGCGACGGGAAAGAATGTTATGGTTGGGTGGCCGTTCATCGAATCAATTTTGGTCTTGGGCTCTT
CCATTTGATCCTTGCCTTCATGCTGCTTGGAGTCAGGTCCTCCAAAGATGGCCGTGCGGTCCTTCAGAATGGGTT
CTGGGGTCCCAAGATCATTCTGTGGCTTGCGCTCGTTGTGGCATCATTCTTCATCCCCGAGTCGTTCTTCTTCGT
CTACGGTCACTATATCGCCTTTATCTGCGCCATGCTGTTCCTTCTGCTGGGTCTAATTCTCTTGGTGGATCTGGC
GCATTCATGGGCGGAATTGTGCCTGCAGAAGATTGAAGATAGTGATTCACGCACGTGGCGTGGCCTTCTGATAGG
CTCTACTGTGGGCATGTACGTTGCATCTCTCGTCATGACGGTCTTGATGTATGTCTTTTTTGCCCACAGCGGATG
CGCCATGAACCAGGCTGCGATTACTGTAAGTTTGCTGCGTCCTCTACAGTCTGTCATCTGCCATCTCTGGCCCCG
TGCTTACTTTCCGCAATAGATTAATCTTGTTGTCTTCCTTATTATTTCGATCATCTCGGTGCAGCCCATGGTGCA
GGAATCCAACCCCAGAGCAGGATTGGCCCAGGCCGCCATGGTTACAATTTATTGCACCTATCTCACCATGTCCGC
GGTGTCCATGGAGCCAGATGACCGTCACTGTAACCCTCTGATTCGTGCGCGAGGCACCAGAACGGCTAGTATCGT
TTTGGGCGCGATTGTCACTATGGCTACCATCGCGTATACGACCACCCGCGCGGCCACCCAGGGCATTGCGCTAGG
CTCCCAAGGGGGGCACAACTACTCGCAGCTGGGATCGGATGACAACGAGCATGGTCTTGTGACCCAGCAGCCAAC
CACTCGCCGCGAGATGCGGGCCGAGGCTCTTCGGGCGGCTGTTGAGAGTGGCGCTTTGCCCGCCAGTGCGCTGGA
TGACAGCGACGACGAATCCGACGAGTATGACACCAAGGACGACGAAAAGGGATCGACGCAGTATAATTACTCTTT
GTTCCATATCATCTTCTTCCTGGCGACCACCTGGGTCGCTACCTTGCTGACCCAGAACTTGGACCCGGAGGCCGT
CGACGACTTTGCGCCCGTTGGCCGCACCTACTGGGCCAGCTGGGTGAAGATCATTAGTGCCTGGGTGTGCTATGG
AATTTACCTGTGGACCCTGATCGCACCGGTGGTTCTGCCGGACCGCTTTGACACCTACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail