Protein ID | Ani_SJS100_1|g1502.t1 |
Gene name | |
Location | scaffold_005:472873..474509 |
Strand | + |
Gene length (bp) | 1636 |
Transcript length (bp) | 1437 |
Coding sequence length (bp) | 1437 |
Protein length (aa) | 479 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03348 | Serinc | Serine incorporator (Serinc) | 5.3E-177 | 24 | 474 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 18 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 49 | 71 | 22 |
3 | 95 | 117 | 22 |
4 | 137 | 156 | 19 |
5 | 161 | 183 | 22 |
6 | 204 | 226 | 22 |
7 | 236 | 258 | 22 |
8 | 265 | 287 | 22 |
9 | 302 | 321 | 19 |
10 | 407 | 429 | 22 |
11 | 444 | 466 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1502.t1 MGALLSLPLLALPSASTLITLATSCCGAATCSAVCSACGKFQNSMATRIAYAFILLFNSIISWIMLTPWALKKLQ HMTLDYMEIRCDGKECYGWVAVHRINFGLGLFHLILAFMLLGVRSSKDGRAVLQNGFWGPKIILWLALVVASFFI PESFFFVYGHYIAFICAMLFLLLGLILLVDLAHSWAELCLQKIEDSDSRTWRGLLIGSTVGMYVASLVMTVLMYV FFAHSGCAMNQAAITINLVVFLIISIISVQPMVQESNPRAGLAQAAMVTIYCTYLTMSAVSMEPDDRHCNPLIRA RGTRTASIVLGAIVTMATIAYTTTRAATQGIALGSQGGHNYSQLGSDDNEHGLVTQQPTTRREMRAEALRAAVES GALPASALDDSDDESDEYDTKDDEKGSTQYNYSLFHIIFFLATTWVATLLTQNLDPEAVDDFAPVGRTYWASWVK IISAWVCYGIYLWTLIAPVVLPDRFDTY* |
Coding | >Ani_SJS100_1|g1502.t1 ATGGGTGCCCTCTTATCTCTGCCTCTGCTGGCTCTTCCCAGCGCCAGCACGCTCATCACCCTCGCGACATCGTGC TGCGGCGCAGCGACCTGCTCGGCAGTATGTAGTGCATGCGGGAAGTTTCAGAACAGTATGGCTACGAGAATCGCC TATGCCTTCATCCTCTTGTTCAATTCGATCATCTCCTGGATAATGCTCACGCCATGGGCGCTCAAAAAGTTACAA CACATGACGCTAGATTACATGGAAATCAGATGCGACGGGAAAGAATGTTATGGTTGGGTGGCCGTTCATCGAATC AATTTTGGTCTTGGGCTCTTCCATTTGATCCTTGCCTTCATGCTGCTTGGAGTCAGGTCCTCCAAAGATGGCCGT GCGGTCCTTCAGAATGGGTTCTGGGGTCCCAAGATCATTCTGTGGCTTGCGCTCGTTGTGGCATCATTCTTCATC CCCGAGTCGTTCTTCTTCGTCTACGGTCACTATATCGCCTTTATCTGCGCCATGCTGTTCCTTCTGCTGGGTCTA ATTCTCTTGGTGGATCTGGCGCATTCATGGGCGGAATTGTGCCTGCAGAAGATTGAAGATAGTGATTCACGCACG TGGCGTGGCCTTCTGATAGGCTCTACTGTGGGCATGTACGTTGCATCTCTCGTCATGACGGTCTTGATGTATGTC TTTTTTGCCCACAGCGGATGCGCCATGAACCAGGCTGCGATTACTATTAATCTTGTTGTCTTCCTTATTATTTCG ATCATCTCGGTGCAGCCCATGGTGCAGGAATCCAACCCCAGAGCAGGATTGGCCCAGGCCGCCATGGTTACAATT TATTGCACCTATCTCACCATGTCCGCGGTGTCCATGGAGCCAGATGACCGTCACTGTAACCCTCTGATTCGTGCG CGAGGCACCAGAACGGCTAGTATCGTTTTGGGCGCGATTGTCACTATGGCTACCATCGCGTATACGACCACCCGC GCGGCCACCCAGGGCATTGCGCTAGGCTCCCAAGGGGGGCACAACTACTCGCAGCTGGGATCGGATGACAACGAG CATGGTCTTGTGACCCAGCAGCCAACCACTCGCCGCGAGATGCGGGCCGAGGCTCTTCGGGCGGCTGTTGAGAGT GGCGCTTTGCCCGCCAGTGCGCTGGATGACAGCGACGACGAATCCGACGAGTATGACACCAAGGACGACGAAAAG GGATCGACGCAGTATAATTACTCTTTGTTCCATATCATCTTCTTCCTGGCGACCACCTGGGTCGCTACCTTGCTG ACCCAGAACTTGGACCCGGAGGCCGTCGACGACTTTGCGCCCGTTGGCCGCACCTACTGGGCCAGCTGGGTGAAG ATCATTAGTGCCTGGGTGTGCTATGGAATTTACCTGTGGACCCTGATCGCACCGGTGGTTCTGCCGGACCGCTTT GACACCTACTGA |
Transcript | >Ani_SJS100_1|g1502.t1 ATGGGTGCCCTCTTATCTCTGCCTCTGCTGGCTCTTCCCAGCGCCAGCACGCTCATCACCCTCGCGACATCGTGC TGCGGCGCAGCGACCTGCTCGGCAGTATGTAGTGCATGCGGGAAGTTTCAGAACAGTATGGCTACGAGAATCGCC TATGCCTTCATCCTCTTGTTCAATTCGATCATCTCCTGGATAATGCTCACGCCATGGGCGCTCAAAAAGTTACAA CACATGACGCTAGATTACATGGAAATCAGATGCGACGGGAAAGAATGTTATGGTTGGGTGGCCGTTCATCGAATC AATTTTGGTCTTGGGCTCTTCCATTTGATCCTTGCCTTCATGCTGCTTGGAGTCAGGTCCTCCAAAGATGGCCGT GCGGTCCTTCAGAATGGGTTCTGGGGTCCCAAGATCATTCTGTGGCTTGCGCTCGTTGTGGCATCATTCTTCATC CCCGAGTCGTTCTTCTTCGTCTACGGTCACTATATCGCCTTTATCTGCGCCATGCTGTTCCTTCTGCTGGGTCTA ATTCTCTTGGTGGATCTGGCGCATTCATGGGCGGAATTGTGCCTGCAGAAGATTGAAGATAGTGATTCACGCACG TGGCGTGGCCTTCTGATAGGCTCTACTGTGGGCATGTACGTTGCATCTCTCGTCATGACGGTCTTGATGTATGTC TTTTTTGCCCACAGCGGATGCGCCATGAACCAGGCTGCGATTACTATTAATCTTGTTGTCTTCCTTATTATTTCG ATCATCTCGGTGCAGCCCATGGTGCAGGAATCCAACCCCAGAGCAGGATTGGCCCAGGCCGCCATGGTTACAATT TATTGCACCTATCTCACCATGTCCGCGGTGTCCATGGAGCCAGATGACCGTCACTGTAACCCTCTGATTCGTGCG CGAGGCACCAGAACGGCTAGTATCGTTTTGGGCGCGATTGTCACTATGGCTACCATCGCGTATACGACCACCCGC GCGGCCACCCAGGGCATTGCGCTAGGCTCCCAAGGGGGGCACAACTACTCGCAGCTGGGATCGGATGACAACGAG CATGGTCTTGTGACCCAGCAGCCAACCACTCGCCGCGAGATGCGGGCCGAGGCTCTTCGGGCGGCTGTTGAGAGT GGCGCTTTGCCCGCCAGTGCGCTGGATGACAGCGACGACGAATCCGACGAGTATGACACCAAGGACGACGAAAAG GGATCGACGCAGTATAATTACTCTTTGTTCCATATCATCTTCTTCCTGGCGACCACCTGGGTCGCTACCTTGCTG ACCCAGAACTTGGACCCGGAGGCCGTCGACGACTTTGCGCCCGTTGGCCGCACCTACTGGGCCAGCTGGGTGAAG ATCATTAGTGCCTGGGTGTGCTATGGAATTTACCTGTGGACCCTGATCGCACCGGTGGTTCTGCCGGACCGCTTT GACACCTACTGA |
Gene | >Ani_SJS100_1|g1502.t1 ATGGGTGCCCTCTTATCTCTGCCTCTGCTGGCTCTTCCCAGCGCCAGCACGGTACGTGCGCCTCCATCACCGCCA TCTAATCCCCCCACTGACATCAAGGTAGCTCATCACCCTCGCGACATCGTGCTGCGGCGCAGCGACCTGCTCGGC AGTATGTAGTGCATGCGGGAAGTTTCAGAACAGGTTAGCGACATCCAAACAGAAAACAAGCCTCACGCGCCATAA TGATGGACCTGGCTGACATTAGGCACCAACTAACAGTATGGCTACGAGAATCGCCTATGCCTTCATCCTCTTGTT CAATTCGATCATCTCCTGGATAATGCTCACGCCATGGGCGCTCAAAAAGTTACAACACATGACGCTAGATTACAT GGAAATCAGATGCGACGGGAAAGAATGTTATGGTTGGGTGGCCGTTCATCGAATCAATTTTGGTCTTGGGCTCTT CCATTTGATCCTTGCCTTCATGCTGCTTGGAGTCAGGTCCTCCAAAGATGGCCGTGCGGTCCTTCAGAATGGGTT CTGGGGTCCCAAGATCATTCTGTGGCTTGCGCTCGTTGTGGCATCATTCTTCATCCCCGAGTCGTTCTTCTTCGT CTACGGTCACTATATCGCCTTTATCTGCGCCATGCTGTTCCTTCTGCTGGGTCTAATTCTCTTGGTGGATCTGGC GCATTCATGGGCGGAATTGTGCCTGCAGAAGATTGAAGATAGTGATTCACGCACGTGGCGTGGCCTTCTGATAGG CTCTACTGTGGGCATGTACGTTGCATCTCTCGTCATGACGGTCTTGATGTATGTCTTTTTTGCCCACAGCGGATG CGCCATGAACCAGGCTGCGATTACTGTAAGTTTGCTGCGTCCTCTACAGTCTGTCATCTGCCATCTCTGGCCCCG TGCTTACTTTCCGCAATAGATTAATCTTGTTGTCTTCCTTATTATTTCGATCATCTCGGTGCAGCCCATGGTGCA GGAATCCAACCCCAGAGCAGGATTGGCCCAGGCCGCCATGGTTACAATTTATTGCACCTATCTCACCATGTCCGC GGTGTCCATGGAGCCAGATGACCGTCACTGTAACCCTCTGATTCGTGCGCGAGGCACCAGAACGGCTAGTATCGT TTTGGGCGCGATTGTCACTATGGCTACCATCGCGTATACGACCACCCGCGCGGCCACCCAGGGCATTGCGCTAGG CTCCCAAGGGGGGCACAACTACTCGCAGCTGGGATCGGATGACAACGAGCATGGTCTTGTGACCCAGCAGCCAAC CACTCGCCGCGAGATGCGGGCCGAGGCTCTTCGGGCGGCTGTTGAGAGTGGCGCTTTGCCCGCCAGTGCGCTGGA TGACAGCGACGACGAATCCGACGAGTATGACACCAAGGACGACGAAAAGGGATCGACGCAGTATAATTACTCTTT GTTCCATATCATCTTCTTCCTGGCGACCACCTGGGTCGCTACCTTGCTGACCCAGAACTTGGACCCGGAGGCCGT CGACGACTTTGCGCCCGTTGGCCGCACCTACTGGGCCAGCTGGGTGAAGATCATTAGTGCCTGGGTGTGCTATGG AATTTACCTGTGGACCCTGATCGCACCGGTGGTTCTGCCGGACCGCTTTGACACCTACTGA |