© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g1501.t1 |
| Gene name | |
| Location | scaffold_005:469847..471882 |
| Strand | - |
| Gene length (bp) | 2035 |
| Transcript length (bp) | 1509 |
| Coding sequence length (bp) | 1509 |
| Protein length (aa) | 503 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06813 | Nodulin-like | Nodulin-like | 6.6E-18 | 12 | 197 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.4E-12 | 20 | 408 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 34 | 22 |
| 2 | 77 | 99 | 22 |
| 3 | 106 | 128 | 22 |
| 4 | 143 | 165 | 22 |
| 5 | 172 | 194 | 22 |
| 6 | 277 | 299 | 22 |
| 7 | 356 | 378 | 22 |
| 8 | 382 | 404 | 22 |
| 9 | 417 | 439 | 22 |
| 10 | 462 | 484 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1501.t1 MAASPHKSKRIVSVVAATLVALACGTNYAYSAWAPQFAQQMKISSTESNFIGAAGNLGMYASGIPLGLLTDARGP RLTTFLGAITLGIGYYPIYLAYVKGPGSMAIIFLSFFAFLTGFGSCSAFSASIKTSASNFPDHRGTATAFPLAAF GLSAFFWSTVSSILFKDDTGRFLLLLALGTCALNLVSIPFLRIMPPSEPYMPLGRGRSPGVESQRLRTTRSTEFR HSLEESDEAVPSRSSREYLTQHEEDDDALSDVALESPHPDVRGLAMLPKIEFWQLFLTMALLSGIGLMTINNIGN SAKALWQYYDDSASPKFIQQRQVMHVSILSFGNFIGRLSSGIGSDLLVKKLNMSRFWCLFISAFVFTITQLAGSA ISNPHQLAIVSGFTGIAYGFLFGVFPSLVAHTFGIGGLSQNWGVMTLAPVLSGNVFNLLYGSIYDRHSIVEPNGD RDCPDGLACYQAAYYTTFLSGVAGVVVCLWSILHERRIHGAMHKKVEHDRLA* |
| Coding | >Ani_SJS100_1|g1501.t1 ATGGCCGCCTCGCCCCATAAATCGAAGCGGATCGTTTCCGTCGTAGCGGCCACCCTGGTTGCTCTCGCGTGTGGT ACCAATTATGCATACTCGGCATGGGCGCCCCAATTTGCGCAACAAATGAAGATTTCCTCTACCGAAAGCAACTTC ATTGGCGCGGCTGGGAATTTGGGCATGTATGCATCGGGAATCCCATTGGGTCTGTTGACAGATGCTCGAGGTCCG CGTCTGACGACTTTCTTGGGTGCAATCACGCTGGGAATCGGCTACTATCCCATCTATCTGGCCTACGTCAAGGGC CCAGGGTCGATGGCCATTATCTTCCTGTCGTTTTTTGCTTTCTTGACAGGCTTCGGAAGTTGCTCGGCGTTCTCA GCGTCAATCAAGACATCGGCTTCCAACTTCCCCGATCATCGTGGAACAGCGACTGCTTTCCCCTTGGCCGCTTTT GGGCTGAGTGCGTTCTTCTGGTCGACCGTCTCCTCGATTCTCTTCAAGGACGATACAGGCCGCTTCCTCCTTTTG CTGGCTCTGGGCACCTGTGCCCTAAACCTCGTTTCGATCCCGTTTCTTCGTATCATGCCTCCTAGTGAGCCATAT ATGCCACTCGGACGGGGCAGGTCCCCTGGCGTAGAATCTCAACGACTACGCACTACTAGATCTACAGAATTCCGG CACAGTCTGGAAGAATCTGATGAAGCAGTTCCTTCACGCTCTTCCCGAGAATACCTCACCCAACACGAGGAGGAT GACGATGCTCTCTCCGATGTTGCTCTTGAATCCCCGCACCCGGACGTTCGCGGCTTGGCGATGCTTCCGAAGATT GAGTTCTGGCAACTCTTTTTGACGATGGCCCTTCTTTCTGGAATTGGTTTGATGACCATTAATAATATTGGCAAC AGCGCCAAGGCACTTTGGCAGTACTACGACGACAGTGCAAGCCCGAAGTTTATTCAACAGCGCCAGGTTATGCAT GTCTCGATTCTGTCTTTTGGGAACTTCATTGGTCGGCTTTCTAGCGGTATTGGCTCCGACCTTTTGGTGAAGAAG CTGAACATGTCGCGATTCTGGTGTCTGTTCATCTCCGCCTTTGTCTTCACCATCACCCAGCTTGCAGGCTCCGCC ATCTCCAACCCTCATCAACTAGCCATTGTATCCGGATTCACCGGTATCGCATACGGCTTCCTTTTTGGCGTCTTC CCATCGCTGGTCGCCCACACCTTCGGCATCGGCGGCCTCTCTCAGAATTGGGGTGTAATGACGCTTGCGCCCGTG CTGAGCGGCAACGTCTTCAACCTGCTCTACGGCAGCATCTACGACCGCCACTCGATTGTCGAACCCAACGGAGAC CGCGACTGTCCGGATGGTCTGGCTTGCTACCAGGCTGCGTACTACACGACGTTCTTGTCCGGCGTAGCCGGTGTG GTCGTCTGTCTGTGGAGCATCCTTCACGAGAGACGCATCCACGGCGCGATGCACAAGAAGGTCGAGCATGACCGA CTTGCTTAG |
| Transcript | >Ani_SJS100_1|g1501.t1 ATGGCCGCCTCGCCCCATAAATCGAAGCGGATCGTTTCCGTCGTAGCGGCCACCCTGGTTGCTCTCGCGTGTGGT ACCAATTATGCATACTCGGCATGGGCGCCCCAATTTGCGCAACAAATGAAGATTTCCTCTACCGAAAGCAACTTC ATTGGCGCGGCTGGGAATTTGGGCATGTATGCATCGGGAATCCCATTGGGTCTGTTGACAGATGCTCGAGGTCCG CGTCTGACGACTTTCTTGGGTGCAATCACGCTGGGAATCGGCTACTATCCCATCTATCTGGCCTACGTCAAGGGC CCAGGGTCGATGGCCATTATCTTCCTGTCGTTTTTTGCTTTCTTGACAGGCTTCGGAAGTTGCTCGGCGTTCTCA GCGTCAATCAAGACATCGGCTTCCAACTTCCCCGATCATCGTGGAACAGCGACTGCTTTCCCCTTGGCCGCTTTT GGGCTGAGTGCGTTCTTCTGGTCGACCGTCTCCTCGATTCTCTTCAAGGACGATACAGGCCGCTTCCTCCTTTTG CTGGCTCTGGGCACCTGTGCCCTAAACCTCGTTTCGATCCCGTTTCTTCGTATCATGCCTCCTAGTGAGCCATAT ATGCCACTCGGACGGGGCAGGTCCCCTGGCGTAGAATCTCAACGACTACGCACTACTAGATCTACAGAATTCCGG CACAGTCTGGAAGAATCTGATGAAGCAGTTCCTTCACGCTCTTCCCGAGAATACCTCACCCAACACGAGGAGGAT GACGATGCTCTCTCCGATGTTGCTCTTGAATCCCCGCACCCGGACGTTCGCGGCTTGGCGATGCTTCCGAAGATT GAGTTCTGGCAACTCTTTTTGACGATGGCCCTTCTTTCTGGAATTGGTTTGATGACCATTAATAATATTGGCAAC AGCGCCAAGGCACTTTGGCAGTACTACGACGACAGTGCAAGCCCGAAGTTTATTCAACAGCGCCAGGTTATGCAT GTCTCGATTCTGTCTTTTGGGAACTTCATTGGTCGGCTTTCTAGCGGTATTGGCTCCGACCTTTTGGTGAAGAAG CTGAACATGTCGCGATTCTGGTGTCTGTTCATCTCCGCCTTTGTCTTCACCATCACCCAGCTTGCAGGCTCCGCC ATCTCCAACCCTCATCAACTAGCCATTGTATCCGGATTCACCGGTATCGCATACGGCTTCCTTTTTGGCGTCTTC CCATCGCTGGTCGCCCACACCTTCGGCATCGGCGGCCTCTCTCAGAATTGGGGTGTAATGACGCTTGCGCCCGTG CTGAGCGGCAACGTCTTCAACCTGCTCTACGGCAGCATCTACGACCGCCACTCGATTGTCGAACCCAACGGAGAC CGCGACTGTCCGGATGGTCTGGCTTGCTACCAGGCTGCGTACTACACGACGTTCTTGTCCGGCGTAGCCGGTGTG GTCGTCTGTCTGTGGAGCATCCTTCACGAGAGACGCATCCACGGCGCGATGCACAAGAAGGTCGAGCATGACCGA CTTGCTTAG |
| Gene | >Ani_SJS100_1|g1501.t1 ATGGCCGCCTCGCCCCATAAATCGAAGCGGATCGTTTCCGTCGTAGCGGCCACCCTGGTTGCTCTCGCGTGTGGT ACCAATGTGCGCTTCTTCCGTTCTCTAGGTCCAATATGAGGTTGGATGTTTGGCAAGAGTCTGATCTGTGTGACA GTATGCATACTCGGCATGGGCGCCCCAATTTGCGCAACAAATGAAGATTTCCTCTACCGAAAGCAACTTCATTGT AAGCCGCCCATTGCGCCCTTCTCCCATGATTCAACAAGTTGTTAATAATACTTCCAGGGCGCGGCTGGGAATTTG GGCATGTATGCATCGGGAATCCCATTGGGTCTGTTGACAGATGCTCGAGGTCCGCGTCTGACGACTTTCTTGGGT GCAATCACGCTGGGAATCGGCTACTATCCCATCTATCTGGGTATGTCCTATATTGAACCCTGAGAGGTTGCAGCT AGCTAATATCTGCATGTTCAGCCTACGTCAAGGGCCCAGGGTCGATGGCCATTATCTTCCTGTCGTTTTTTGCTT TCTTGACAGGCTTCGGAAGTTGCTCGGCGTTCTCAGCGTCAATCAAGACATGTGCGCCAAGCCTCTCTAATGAAT ACATTATCTGTCATGGCTAACAACATCGTTTAGCGGCTTCCAACTTCCCCGATCATCGTGGAACAGCGACTGCTT TCCCCTTGGCCGCTTTTGGGCTGAGTGCGTTCTTCTGGTCGACCGTCTCCTCGATTCTCTTCAAGGACGATACAG GCCGCTTCCTCCTTTTGCTGGCTCTGGGCACCTGTGCCCTAAACCTCGTTTCGATCCCGTTTCTTCGTATCATGC CTCCTAGTGAGCCATATATGCCACTCGGACGGGGCAGGTCCCCTGGCGTAGAATCTCAACGACTACGCACTACTA GATCTACAGAATTCCGGCACAGTCTGGAAGAATCTGATGAAGCAGGTACGCAGACCTCTATAACCTATGATTCCT GTCCCGCAGCGCGTGACAGGTCGCACTCGGTCGTGTCGAGTCCCCATCACCCCGGCCACAGCCCCGATATTGACG AAACATCCTCCTTGGTGTCCAAAGTTCCTTCACGCTCTTCCCGAGAATACCTCACCCAACACGAGGAGGATGACG ATGCTCTCTCCGATGTTGCTCTTGAATCCCCGCACCCGGACGTTCGCGGCTTGGCGATGCTTCCGAAGATTGAGT TCTGGCAACTCTTTTTGACGATGGCCCTTCTTTCTGGAATTGGTTTGATGACCATTAAGTCAGTACCCTTACCTT TAATTTTGCTTTTGTTCGATGCTAACAATTTAATAGTAATATTGGCAACAGCGTAAGGCGACTCCGTATGACCCC TTCCATATCAGCTGATCTAATTGTTTCGCAGGCCAAGGCACTTTGGCAGTACTACGACGACAGTGCAAGCCCGAA GTTTATTCAACAGCGCCAGGTTATGCATGTCTCGATTCTGTCTTTTGGGAACTTCATTGGTCGGCTTTCTAGCGG TATGTCGGCACATTCACTGTTCACAATTGGCTACTAATCTCCTATAGGTATTGGCTCCGACCTTTTGGTGAAGAA GCTGAACATGTCGCGATTCTGGTGTCTGTTCATCTCCGCCTTTGTCTTCACCATCACCCAGCTTGCAGGCTCCGC CATCTCCAACCCTCATCAACTAGCCATTGTATCCGGATTCACCGGTATCGCATACGGCTTCCTTTTTGGCGTCTT CCCATCGCTGGTCGCCCACACCTTCGGCATCGGCGGCCTCTCTCAGAATTGGGGTGTAATGACGCTTGCGCCCGT GCTGAGCGGCAACGTCTTCAACCTGCTCTACGGCAGCATCTACGACCGCCACTCGATTGTCGAACCCAACGGAGA CCGCGACTGTCCGGATGGTCTGGCTTGCTACCAGGCTGCGTACTACACGACGTTCTTGTCCGGCGTAGCCGGTGT GGTCGTCTGTCTGTGGAGCATCCTTCACGAGAGACGCATCCACGGCGCGATGCACAAGAAGGTCGAGCATGACCG ACTTGCTTAG |