© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1491.t1 |
| Gene name | |
| Location | scaffold_005:450979..451618 |
| Strand | - |
| Gene length (bp) | 639 |
| Transcript length (bp) | 462 |
| Coding sequence length (bp) | 462 |
| Protein length (aa) | 154 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14853 | Fis1_TPR_C | Fis1 C-terminal tetratricopeptide repeat | 4.7E-23 | 74 | 126 |
| PF14852 | Fis1_TPR_N | Fis1 N-terminal tetratricopeptide repeat | 5.0E-16 | 37 | 67 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 125 | 147 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1491.t1 MGSNLPYAADAESPLKPAELQVLRAQYEKEGDYVGIQTKFNYAWGLIKSNARVEQQEGVRLLSEIFRAAPERRRE CLYYLALGNYKLGNYGEARRYNDLLRDKEPGNLQAASLGQLIDEKVSKEGLMGIAIVGGLALAAGVVGGLVMRGA KRR* |
| Coding | >Ani_SJS100_1|g1491.t1 ATGGGTTCTAATCTTCCTTATGCCGCCGATGCTGAGAGTCCGCTAAAGCCAGCGGAACTTCAGGTGCTCCGCGCC CAGTATGAGAAGGAAGGTGACTACGTGGGGATTCAGACCAAGTTCAACTACGCCTGGGGCCTGATTAAATCCAAC GCCCGAGTCGAACAACAAGAGGGTGTCCGTCTGCTGTCGGAGATCTTCCGCGCGGCACCCGAACGACGTCGCGAA TGCCTGTACTACCTCGCGTTGGGCAACTACAAGCTCGGTAACTACGGCGAAGCCCGTCGGTACAACGATCTACTG CGTGATAAGGAACCCGGGAACTTGCAAGCAGCTAGTCTGGGCCAGCTCATCGATGAAAAGGTGTCGAAGGAGGGT CTGATGGGTATTGCCATCGTGGGTGGGCTGGCGCTGGCGGCCGGCGTGGTGGGTGGATTGGTGATGCGGGGGGCA AAGAGACGCTGA |
| Transcript | >Ani_SJS100_1|g1491.t1 ATGGGTTCTAATCTTCCTTATGCCGCCGATGCTGAGAGTCCGCTAAAGCCAGCGGAACTTCAGGTGCTCCGCGCC CAGTATGAGAAGGAAGGTGACTACGTGGGGATTCAGACCAAGTTCAACTACGCCTGGGGCCTGATTAAATCCAAC GCCCGAGTCGAACAACAAGAGGGTGTCCGTCTGCTGTCGGAGATCTTCCGCGCGGCACCCGAACGACGTCGCGAA TGCCTGTACTACCTCGCGTTGGGCAACTACAAGCTCGGTAACTACGGCGAAGCCCGTCGGTACAACGATCTACTG CGTGATAAGGAACCCGGGAACTTGCAAGCAGCTAGTCTGGGCCAGCTCATCGATGAAAAGGTGTCGAAGGAGGGT CTGATGGGTATTGCCATCGTGGGTGGGCTGGCGCTGGCGGCCGGCGTGGTGGGTGGATTGGTGATGCGGGGGGCA AAGAGACGCTGA |
| Gene | >Ani_SJS100_1|g1491.t1 ATGGGTTCTAATCTTCCTTGTGAGTACTTCTATTCTTGTTGGCGCTGGTTCCCCCCGCTAACTGCATGCCTGCAG ATGCCGCCGATGCTGAGAGGTCAGCGCTTCCCCCATCGGATACTCTACCAATACCCCAGATCCCAGCGAAGCTAA CCGGTGCACAGTCCGCTAAAGCCAGCGGAACTTCAGGTGCTCCGCGCCCAGTATGAGAAGGAAGGTGACTACGTG GGGATTCAGACCAAGTTCAACTACGCCTGGGTAGGTGCCGGCAGATATCCCGATGCAGGCCCGTTTGGCTGACAG CATGTATAGGGCCTGATTAAATCCAACGCCCGAGTCGAACAACAAGAGGGTGTCCGTCTGCTGTCGGAGATCTTC CGCGCGGCACCCGAACGACGTCGCGAATGCCTGTACTACCTCGCGTTGGGCAACTACAAGCTCGGTAACTACGGC GAAGCCCGTCGGTACAACGATCTACTGCGTGATAAGGAACCCGGGAACTTGCAAGCAGCTAGTCTGGGCCAGCTC ATCGATGAAAAGGTGTCGAAGGAGGGTCTGATGGGTATTGCCATCGTGGGTGGGCTGGCGCTGGCGGCCGGCGTG GTGGGTGGATTGGTGATGCGGGGGGCAAAGAGACGCTGA |