© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1471.t1 |
| Gene name | |
| Location | scaffold_005:381066..381710 |
| Strand | - |
| Gene length (bp) | 644 |
| Transcript length (bp) | 441 |
| Coding sequence length (bp) | 441 |
| Protein length (aa) | 147 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00034 | Cytochrom_C | Cytochrome c | 4.3E-13 | 46 | 143 |
| PF13442 | Cytochrome_CBB3 | Cytochrome C oxidase, cbb3-type, subunit III | 7.6E-06 | 46 | 141 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009055 | electron transfer activity | Yes |
| GO:0020037 | heme binding | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0046906 | tetrapyrrole binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1471.t1 MSWDASVLPCVIQWREEIAEREKREAEAADKAKQQLANFDLDSGDSAKGAKLFQTRCAQCHTVEAGGPHKVGPNL NGLFGRKTGQAEGYAYTDANKQAGVTWDENSLFSYLENPKKFIPGTKMAFGGLKKGKERNDLITYLKESTA* |
| Coding | >Ani_SJS100_1|g1471.t1 ATGAGCTGGGACGCATCTGTTTTACCTTGCGTGATCCAATGGCGCGAGGAAATTGCAGAAAGGGAAAAGAGAGAG GCCGAGGCGGCAGACAAAGCCAAACAACAGCTTGCTAACTTCGATCTCGATTCAGGTGACTCCGCCAAGGGTGCT AAGCTCTTCCAGACTCGTTGCGCTCAGTGCCACACTGTCGAGGCTGGTGGTCCCCACAAGGTCGGCCCCAACTTG AACGGTCTCTTCGGCCGTAAGACCGGTCAGGCCGAGGGCTACGCCTACACCGACGCCAACAAGCAGGCTGGTGTC ACCTGGGATGAGAACTCTCTGTTCTCCTACCTCGAGAACCCCAAGAAGTTCATCCCCGGTACCAAGATGGCCTTC GGTGGTCTCAAGAAGGGCAAGGAGAGGAACGACCTCATCACTTACCTCAAGGAGAGCACCGCTTAA |
| Transcript | >Ani_SJS100_1|g1471.t1 ATGAGCTGGGACGCATCTGTTTTACCTTGCGTGATCCAATGGCGCGAGGAAATTGCAGAAAGGGAAAAGAGAGAG GCCGAGGCGGCAGACAAAGCCAAACAACAGCTTGCTAACTTCGATCTCGATTCAGGTGACTCCGCCAAGGGTGCT AAGCTCTTCCAGACTCGTTGCGCTCAGTGCCACACTGTCGAGGCTGGTGGTCCCCACAAGGTCGGCCCCAACTTG AACGGTCTCTTCGGCCGTAAGACCGGTCAGGCCGAGGGCTACGCCTACACCGACGCCAACAAGCAGGCTGGTGTC ACCTGGGATGAGAACTCTCTGTTCTCCTACCTCGAGAACCCCAAGAAGTTCATCCCCGGTACCAAGATGGCCTTC GGTGGTCTCAAGAAGGGCAAGGAGAGGAACGACCTCATCACTTACCTCAAGGAGAGCACCGCTTAA |
| Gene | >Ani_SJS100_1|g1471.t1 ATGAGCTGGGACGCATCTGTTTTACCTTGCGTGATCCAATGGCGCGAGGAAATTGCAGAAAGGGAAAAGAGAGAG GCCGAGGCGGCAGACAAAGCCAAACAACAGCTTGCTAACTTCGATCTCGATTCAGGTGACTCCGCCAAGGGTGCT AAGCTCTTCCAGGTGAGTTGTGATCGCTCTGCGTCGCAAGGCGGCACTGCTTGAACAGAACAGTATTGACTAACA TCGCGTTCAGACTCGTTGCGCTCAGTGCCACACTGTCGAGGCTGGTGGTCCCCACAAGGTCGGCCCCAACTTGAA CGGTCTCTTCGGCCGTAAGACCGGTCAGGCCGAGGGCTACGCCTACACCGACGCCAACAAGCAGGCTGGTGTCAC CTGGGATGAGAACTCTCTGGTAGGCTCCGACTCACCACTTCGCGAAACGTAATGAAGATTTTCGGCTAATTATCT GTCTGCAGTTCTCCTACCTCGAGAACCCCAAGAAGTTCATCCCCGGTACCAAGATGGCCTTCGGTGGTCTCAAGA AGGGCAAGGAGAGGAACGACCTCATCACGTATGTGCTACCCCGGATGATCAGAAATGACGAAATGCAGAGCGCTG ACAATTGTACCTTCTATAGTTACCTCAAGGAGAGCACCGCTTAA |