Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1462.t1
Gene name
Locationscaffold_005:351706..352352
Strand-
Gene length (bp)646
Transcript length (bp)252
Coding sequence length (bp)252
Protein length (aa) 84

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06522 B12D NADH-ubiquinone reductase complex 1 MLRQ subunit 1.2E-04 40 73

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 43 62 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1462.t1
MFPTRVLRMQASRPFAFPTPKENQSAHTISQRLRTLKKVPPELIPLGLVLGVAVGAAIYSSTRKLMTDKTLRLYR
NSPEDREH*
Coding >Ani_SJS100_1|g1462.t1
ATGTTCCCTACTCGTGTTCTGCGCATGCAGGCCTCCCGGCCTTTCGCTTTTCCTACTCCTAAGGAAAACCAGAGC
GCCCACACTATCTCTCAGCGTCTGCGCACTCTGAAGAAAGTTCCCCCGGAGTTGATCCCTCTCGGTCTGGTCCTT
GGTGTCGCCGTCGGTGCTGCCATCTACTCCAGTACCCGCAAGCTCATGACCGACAAGACCCTCCGTCTGTACCGC
AACAGCCCCGAGGACCGCGAGCACTAA
Transcript >Ani_SJS100_1|g1462.t1
ATGTTCCCTACTCGTGTTCTGCGCATGCAGGCCTCCCGGCCTTTCGCTTTTCCTACTCCTAAGGAAAACCAGAGC
GCCCACACTATCTCTCAGCGTCTGCGCACTCTGAAGAAAGTTCCCCCGGAGTTGATCCCTCTCGGTCTGGTCCTT
GGTGTCGCCGTCGGTGCTGCCATCTACTCCAGTACCCGCAAGCTCATGACCGACAAGACCCTCCGTCTGTACCGC
AACAGCCCCGAGGACCGCGAGCACTAA
Gene >Ani_SJS100_1|g1462.t1
ATGTTCCCTACTCGTGTTCTGCGCATGCAGGCCTCCCGGCCTTTCGCTTTTCCTACTCCTGTGAGTTGGCTCCCG
GTCCCCCGTGTTGGCGTGGAAGTTGGGGAAAAATTACGTGTGGCAGGGTGGCTAACAAGTGGCTACAGAAGGAAA
ACCAGAGCGGTATGGGGTTTCCTCCCCGGTTTGCGCATAGGACGGATACTTGATTGATGGAATTGTGTTGTTGGA
GTTGGGAATTGGACTAACGCCTGGCTTCTAGCCCACACTATCTCTCAGCGTCTGCGCACTCTGAAGAAAGTTCCC
CCGGAGTTGATCCCTCTCGGTACGTCGCGGTTCAATGATTAACGCCTTGCCATTGGTTTACAGCAGAGCTAACGA
TTGTTTCTTGAATCCTACAGGTCTGGTCCTTGGGTATGTTTATTTCCTGATATCCTTTGGCTTCTACATGACATG
CCGTGAAATCTAATCCCGACCGCCTCCTCCTACCCTCCTCTCCCCTCCCACTCCTGCAGTCTTCATCTGCCCTCC
ACTGACGCAGTTCCATCGCAGTGTCGCCGTCGGTGCTGCCATCTACTCCAGTACCCGCAAGCTCATGACCGACAA
GACCCTCCGTCTGTACCGCAACAGCCCCGAGGACCGCGAGCACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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