© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1448.t1 |
| Gene name | |
| Location | scaffold_005:312472..313054 |
| Strand | - |
| Gene length (bp) | 582 |
| Transcript length (bp) | 582 |
| Coding sequence length (bp) | 582 |
| Protein length (aa) | 194 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02686 | Glu-tRNAGln | Glu-tRNAGln amidotransferase C subunit | 1.6E-12 | 84 | 187 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006450 | regulation of translational fidelity | Yes |
| GO:0065007 | biological regulation | No |
| GO:0065008 | regulation of biological quality | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1448.t1 MFLRATLPRLSGLIGRQPLGCSTARRMYSASQSGDADIDAMLAKPTWSVRSLLPEESTKQSAPSVTPTQLRHLLR LSALPQPANEEEEKKMLETLESQIHFVKQVQRIDATGVEPLQSIRDESPEAVQENTIGLEQLKEALSKERVVGRN KRIQRVESPRNERPDGDTWDGNALAYASRTKGKFFIVETGISA* |
| Coding | >Ani_SJS100_1|g1448.t1 ATGTTCCTCCGTGCAACTCTTCCCCGACTGTCTGGGTTGATCGGTCGTCAACCTCTGGGTTGCAGCACCGCCAGG CGCATGTACTCTGCCTCCCAGTCAGGCGACGCAGATATTGACGCCATGCTTGCGAAGCCTACGTGGTCTGTTCGC TCGTTGCTACCGGAAGAGTCTACCAAACAATCTGCTCCATCAGTGACCCCGACGCAACTCCGCCATCTGCTTCGT CTCTCGGCTCTCCCGCAACCCGCGAACGAGGAAGAAGAGAAGAAGATGCTTGAAACGCTCGAATCCCAAATTCAC TTTGTCAAGCAGGTCCAGCGCATCGATGCCACTGGCGTGGAACCCCTGCAGAGTATCCGGGACGAAAGTCCAGAA GCGGTGCAGGAGAATACAATCGGACTGGAACAGCTTAAGGAGGCCTTATCCAAGGAGAGAGTGGTTGGTCGAAAC AAAAGAATCCAACGAGTGGAGAGTCCGAGGAACGAGCGGCCCGATGGGGATACCTGGGATGGAAACGCGCTTGCC TATGCATCCAGGACCAAGGGGAAATTCTTCATTGTCGAGACGGGCATCTCAGCATAA |
| Transcript | >Ani_SJS100_1|g1448.t1 ATGTTCCTCCGTGCAACTCTTCCCCGACTGTCTGGGTTGATCGGTCGTCAACCTCTGGGTTGCAGCACCGCCAGG CGCATGTACTCTGCCTCCCAGTCAGGCGACGCAGATATTGACGCCATGCTTGCGAAGCCTACGTGGTCTGTTCGC TCGTTGCTACCGGAAGAGTCTACCAAACAATCTGCTCCATCAGTGACCCCGACGCAACTCCGCCATCTGCTTCGT CTCTCGGCTCTCCCGCAACCCGCGAACGAGGAAGAAGAGAAGAAGATGCTTGAAACGCTCGAATCCCAAATTCAC TTTGTCAAGCAGGTCCAGCGCATCGATGCCACTGGCGTGGAACCCCTGCAGAGTATCCGGGACGAAAGTCCAGAA GCGGTGCAGGAGAATACAATCGGACTGGAACAGCTTAAGGAGGCCTTATCCAAGGAGAGAGTGGTTGGTCGAAAC AAAAGAATCCAACGAGTGGAGAGTCCGAGGAACGAGCGGCCCGATGGGGATACCTGGGATGGAAACGCGCTTGCC TATGCATCCAGGACCAAGGGGAAATTCTTCATTGTCGAGACGGGCATCTCAGCATAA |
| Gene | >Ani_SJS100_1|g1448.t1 ATGTTCCTCCGTGCAACTCTTCCCCGACTGTCTGGGTTGATCGGTCGTCAACCTCTGGGTTGCAGCACCGCCAGG CGCATGTACTCTGCCTCCCAGTCAGGCGACGCAGATATTGACGCCATGCTTGCGAAGCCTACGTGGTCTGTTCGC TCGTTGCTACCGGAAGAGTCTACCAAACAATCTGCTCCATCAGTGACCCCGACGCAACTCCGCCATCTGCTTCGT CTCTCGGCTCTCCCGCAACCCGCGAACGAGGAAGAAGAGAAGAAGATGCTTGAAACGCTCGAATCCCAAATTCAC TTTGTCAAGCAGGTCCAGCGCATCGATGCCACTGGCGTGGAACCCCTGCAGAGTATCCGGGACGAAAGTCCAGAA GCGGTGCAGGAGAATACAATCGGACTGGAACAGCTTAAGGAGGCCTTATCCAAGGAGAGAGTGGTTGGTCGAAAC AAAAGAATCCAACGAGTGGAGAGTCCGAGGAACGAGCGGCCCGATGGGGATACCTGGGATGGAAACGCGCTTGCC TATGCATCCAGGACCAAGGGGAAATTCTTCATTGTCGAGACGGGCATCTCAGCATAA |