© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1446.t1 |
| Gene name | |
| Location | scaffold_005:302630..303945 |
| Strand | + |
| Gene length (bp) | 1315 |
| Transcript length (bp) | 1254 |
| Coding sequence length (bp) | 1254 |
| Protein length (aa) | 418 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11710 | Git3 | G protein-coupled glucose receptor regulating Gpa2 | 1.2E-28 | 35 | 233 |
| PF11970 | GPR_Gpa2_C | G protein-coupled glucose receptor regulating Gpa2 C-term | 1.7E-11 | 243 | 311 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| 2 | 82 | 104 | 22 |
| 3 | 124 | 146 | 22 |
| 4 | 153 | 175 | 22 |
| 5 | 205 | 227 | 22 |
| 6 | 248 | 270 | 22 |
| 7 | 285 | 307 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1446.t1 MLALLRLSRLLGSDGAGHTHLASRSNTEVVEGSDRAGFIAMGVIALISFISALGLLSFLTYRFIFWRKYYKRPLA ENQYVVLIYNLLLVDLQQATAFLICLHWITKGHVYYPSAPCVLQGWWIQTGDPGSGLFVLAIAFHTCAVVLRGRQ LPYPIFVACVVGLWIFIIILGLIPVGMFGSETFVISEAGWCWIGPDHETERLWVHYLWIFLAEFGTVVLYGVMFF YLRRRMKQAATLRQNHQENLKRLNRVVIYMVIYPLVYLLLSLPLAAGRMSTARHIVPSRAYFAVAGSLMALSGFV DVLVYTLTRRHLLLETELSTTDRMYNYTESNAYQTHITTGRDGKKVRMGSRFRRGMGMQSINDTVRDDRDSSTED IVRKTDMELAELGHGVYQETTIEISHEPAEPEDFQKGGRHSG* |
| Coding | >Ani_SJS100_1|g1446.t1 ATGCTCGCTCTACTACGATTGTCACGGCTGCTAGGCAGCGATGGTGCTGGCCACACGCACCTCGCTAGTCGCTCA AACACCGAGGTAGTTGAGGGTAGCGACCGAGCAGGGTTCATTGCCATGGGAGTGATTGCACTCATTTCGTTCATT TCGGCCCTTGGCCTGTTGTCATTCCTTACCTACCGTTTCATTTTCTGGCGCAAATATTACAAACGGCCTTTGGCG GAGAACCAATATGTCGTTCTCATTTACAACCTCCTGTTGGTCGATCTGCAACAAGCAACAGCTTTCTTGATATGT CTCCACTGGATAACAAAAGGTCACGTCTACTATCCCAGTGCACCATGCGTTCTTCAAGGATGGTGGATTCAAACG GGCGATCCCGGAAGTGGTTTGTTCGTTCTGGCGATTGCCTTTCACACATGTGCCGTTGTGCTACGAGGTCGACAA TTACCGTACCCAATATTTGTGGCTTGTGTTGTTGGGCTATGGATATTTATCATCATCCTGGGATTGATCCCCGTT GGAATGTTTGGCTCCGAGACCTTTGTGATTTCTGAAGCTGGCTGGTGCTGGATCGGTCCCGACCATGAAACAGAA CGTCTTTGGGTGCATTATCTCTGGATTTTCCTGGCAGAATTCGGCACGGTCGTTCTTTACGGAGTCATGTTTTTC TACTTGCGACGCCGAATGAAGCAAGCCGCCACGCTTCGACAAAACCACCAGGAGAACCTGAAGCGATTGAACCGA GTTGTCATCTACATGGTTATCTACCCGCTTGTCTATCTTTTGCTTTCCCTGCCGCTAGCCGCCGGACGTATGTCA ACGGCCCGACATATCGTTCCCAGTCGAGCGTACTTTGCCGTGGCCGGTTCGCTGATGGCGTTGTCGGGTTTCGTT GATGTGCTTGTGTACACGCTCACTCGCCGACACCTGTTGCTCGAAACCGAACTCAGTACTACGGATCGGATGTAC AACTACACGGAATCGAACGCATATCAGACACACATCACCACGGGCCGAGATGGCAAGAAAGTACGGATGGGATCC CGATTCCGGCGGGGCATGGGGATGCAGAGCATCAACGACACGGTCAGAGACGACCGCGATTCATCTACAGAAGAC ATTGTGCGCAAGACGGACATGGAGCTGGCCGAGTTGGGCCACGGAGTGTACCAGGAGACGACGATCGAGATTTCG CACGAGCCAGCGGAACCGGAAGACTTCCAGAAGGGAGGTCGCCACAGCGGGTGA |
| Transcript | >Ani_SJS100_1|g1446.t1 ATGCTCGCTCTACTACGATTGTCACGGCTGCTAGGCAGCGATGGTGCTGGCCACACGCACCTCGCTAGTCGCTCA AACACCGAGGTAGTTGAGGGTAGCGACCGAGCAGGGTTCATTGCCATGGGAGTGATTGCACTCATTTCGTTCATT TCGGCCCTTGGCCTGTTGTCATTCCTTACCTACCGTTTCATTTTCTGGCGCAAATATTACAAACGGCCTTTGGCG GAGAACCAATATGTCGTTCTCATTTACAACCTCCTGTTGGTCGATCTGCAACAAGCAACAGCTTTCTTGATATGT CTCCACTGGATAACAAAAGGTCACGTCTACTATCCCAGTGCACCATGCGTTCTTCAAGGATGGTGGATTCAAACG GGCGATCCCGGAAGTGGTTTGTTCGTTCTGGCGATTGCCTTTCACACATGTGCCGTTGTGCTACGAGGTCGACAA TTACCGTACCCAATATTTGTGGCTTGTGTTGTTGGGCTATGGATATTTATCATCATCCTGGGATTGATCCCCGTT GGAATGTTTGGCTCCGAGACCTTTGTGATTTCTGAAGCTGGCTGGTGCTGGATCGGTCCCGACCATGAAACAGAA CGTCTTTGGGTGCATTATCTCTGGATTTTCCTGGCAGAATTCGGCACGGTCGTTCTTTACGGAGTCATGTTTTTC TACTTGCGACGCCGAATGAAGCAAGCCGCCACGCTTCGACAAAACCACCAGGAGAACCTGAAGCGATTGAACCGA GTTGTCATCTACATGGTTATCTACCCGCTTGTCTATCTTTTGCTTTCCCTGCCGCTAGCCGCCGGACGTATGTCA ACGGCCCGACATATCGTTCCCAGTCGAGCGTACTTTGCCGTGGCCGGTTCGCTGATGGCGTTGTCGGGTTTCGTT GATGTGCTTGTGTACACGCTCACTCGCCGACACCTGTTGCTCGAAACCGAACTCAGTACTACGGATCGGATGTAC AACTACACGGAATCGAACGCATATCAGACACACATCACCACGGGCCGAGATGGCAAGAAAGTACGGATGGGATCC CGATTCCGGCGGGGCATGGGGATGCAGAGCATCAACGACACGGTCAGAGACGACCGCGATTCATCTACAGAAGAC ATTGTGCGCAAGACGGACATGGAGCTGGCCGAGTTGGGCCACGGAGTGTACCAGGAGACGACGATCGAGATTTCG CACGAGCCAGCGGAACCGGAAGACTTCCAGAAGGGAGGTCGCCACAGCGGGTGA |
| Gene | >Ani_SJS100_1|g1446.t1 ATGCTCGCTCTACTACGATTGTCACGGCTGCTAGGCAGCGATGGTGCTGGCCACACGCACCTCGCTAGTCGCTCA AACACCGAGGTAGTTGAGGGTAGCGACCGAGCAGGGTTCATTGCCATGGGAGTGATTGCACTCATTTCGTTCATT TCGGCCCTTGGCCTGTTGTCATTCCTTACCTACCGTTTCATTTTCTGGCGCAAATATTACAAACGGCCTTTGGCG GAGAACCAATATGTCGTTCTCATTTACAACCTCCTGTTGGTCGATCTGCAACAAGCAACAGCTTTCTTGATATGT CTCCACTGGATAACAAAAGGTCACGTCTACTATCCCAGTGCACCATGCGTTCTTCAAGGATGGTGGATTCAAACG GGCGATCCCGGAAGTGGTTTGTTCGTTCTGGCGATTGCCTTTCACACATGTGCCGTTGTGCTACGAGGTCGACAA TTACCGTACCCAATATTTGTGGCTTGTGTTGTTGGGCTATGGATATTTATCATCATCCTGGGATTGATCCCCGTT GGAATGTTTGGCTCCGAGACCTTTGTGATTTCTGAAGCTGGCTGGGTAAGCGACCGCAAGGATGTGATACAGATG GAGGAAGTCACTAATTTACCCTGTCTTGCAGTGCTGGATCGGTCCCGACCATGAAACAGAACGTCTTTGGGTGCA TTATCTCTGGATTTTCCTGGCAGAATTCGGCACGGTCGTTCTTTACGGAGTCATGTTTTTCTACTTGCGACGCCG AATGAAGCAAGCCGCCACGCTTCGACAAAACCACCAGGAGAACCTGAAGCGATTGAACCGAGTTGTCATCTACAT GGTTATCTACCCGCTTGTCTATCTTTTGCTTTCCCTGCCGCTAGCCGCCGGACGTATGTCAACGGCCCGACATAT CGTTCCCAGTCGAGCGTACTTTGCCGTGGCCGGTTCGCTGATGGCGTTGTCGGGTTTCGTTGATGTGCTTGTGTA CACGCTCACTCGCCGACACCTGTTGCTCGAAACCGAACTCAGTACTACGGATCGGATGTACAACTACACGGAATC GAACGCATATCAGACACACATCACCACGGGCCGAGATGGCAAGAAAGTACGGATGGGATCCCGATTCCGGCGGGG CATGGGGATGCAGAGCATCAACGACACGGTCAGAGACGACCGCGATTCATCTACAGAAGACATTGTGCGCAAGAC GGACATGGAGCTGGCCGAGTTGGGCCACGGAGTGTACCAGGAGACGACGATCGAGATTTCGCACGAGCCAGCGGA ACCGGAAGACTTCCAGAAGGGAGGTCGCCACAGCGGGTGA |