© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g143.t1 |
| Gene name | |
| Location | scaffold_001:477172..477788 |
| Strand | - |
| Gene length (bp) | 616 |
| Transcript length (bp) | 531 |
| Coding sequence length (bp) | 531 |
| Protein length (aa) | 177 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02982 | Scytalone_dh | Scytalone dehydratase | 1.3E-23 | 11 | 170 |
| PF13577 | SnoaL_4 | SnoaL-like domain | 1.4E-10 | 14 | 153 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030411 | scytalone dehydratase activity | Yes |
| GO:0006582 | melanin metabolic process | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0016835 | carbon-oxygen lyase activity | No |
| GO:0009987 | cellular process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0019748 | secondary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0018958 | phenol-containing compound metabolic process | No |
| GO:0016829 | lyase activity | No |
| GO:0016836 | hydro-lyase activity | No |
| GO:1901615 | organic hydroxy compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0042440 | pigment metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g143.t1 MTFEIYIPSSLTFQDYIAICQCARTFADGYDRKDKTRLRAALAPTVIVDYNKVLPHVTRETYEADDFVEKWLNPT NLGNKALATQHLLGAPYFKFASEEKIVVQWQQLASHGRWVEGQDKTRPVLCKIDETSDGRSWMQQTYVKVDGQWR IQVLEPEVLYHTGDFQKIRRPDEKDA* |
| Coding | >Ani_SJS100_1|g143.t1 ATGACATTCGAAATATACATTCCCTCCTCCCTCACCTTCCAGGATTACATCGCCATCTGCCAATGTGCGCGCACA TTTGCTGATGGGTATGATCGCAAGGATAAAACCCGCCTCCGCGCCGCCCTCGCCCCCACCGTCATAGTCGACTAC AACAAAGTCCTTCCCCACGTCACCCGGGAGACCTACGAAGCCGACGACTTTGTGGAGAAATGGCTGAACCCAACA AACCTCGGCAACAAGGCTCTGGCGACGCAGCATCTCCTCGGAGCACCATACTTCAAGTTCGCATCGGAGGAGAAA ATCGTCGTACAATGGCAGCAACTAGCGAGCCACGGACGGTGGGTTGAAGGCCAGGATAAGACACGCCCTGTTCTG TGCAAGATCGATGAAACGTCAGATGGGAGGAGCTGGATGCAGCAGACGTATGTTAAGGTGGATGGGCAGTGGCGA ATTCAGGTGCTTGAGCCGGAGGTTTTATACCATACGGGGGATTTTCAGAAGATTAGACGGCCGGATGAGAAGGAT GCGTAG |
| Transcript | >Ani_SJS100_1|g143.t1 ATGACATTCGAAATATACATTCCCTCCTCCCTCACCTTCCAGGATTACATCGCCATCTGCCAATGTGCGCGCACA TTTGCTGATGGGTATGATCGCAAGGATAAAACCCGCCTCCGCGCCGCCCTCGCCCCCACCGTCATAGTCGACTAC AACAAAGTCCTTCCCCACGTCACCCGGGAGACCTACGAAGCCGACGACTTTGTGGAGAAATGGCTGAACCCAACA AACCTCGGCAACAAGGCTCTGGCGACGCAGCATCTCCTCGGAGCACCATACTTCAAGTTCGCATCGGAGGAGAAA ATCGTCGTACAATGGCAGCAACTAGCGAGCCACGGACGGTGGGTTGAAGGCCAGGATAAGACACGCCCTGTTCTG TGCAAGATCGATGAAACGTCAGATGGGAGGAGCTGGATGCAGCAGACGTATGTTAAGGTGGATGGGCAGTGGCGA ATTCAGGTGCTTGAGCCGGAGGTTTTATACCATACGGGGGATTTTCAGAAGATTAGACGGCCGGATGAGAAGGAT GCGTAG |
| Gene | >Ani_SJS100_1|g143.t1 ATGACATTCGAAATATACATTCCCTCCTCCCTCACCTTCCAGGATTACATCGCCATCTGCCAATGTGCGCGCACA TTTGCTGATGGGTATGATCGCAAGGTAAAGACTAGTGTTTTCTAATGAATCACTTCCAGCTTATCACAATACCAT CAGAGTACAAACGACTGACATTCTTTGAATTCAGGATAAAACCCGCCTCCGCGCCGCCCTCGCCCCCACCGTCAT AGTCGACTACAACAAAGTCCTTCCCCACGTCACCCGGGAGACCTACGAAGCCGACGACTTTGTGGAGAAATGGCT GAACCCAACAAACCTCGGCAACAAGGCTCTGGCGACGCAGCATCTCCTCGGAGCACCATACTTCAAGTTCGCATC GGAGGAGAAAATCGTCGTACAATGGCAGCAACTAGCGAGCCACGGACGGTGGGTTGAAGGCCAGGATAAGACACG CCCTGTTCTGTGCAAGATCGATGAAACGTCAGATGGGAGGAGCTGGATGCAGCAGACGTATGTTAAGGTGGATGG GCAGTGGCGAATTCAGGTGCTTGAGCCGGAGGTTTTATACCATACGGGGGATTTTCAGAAGATTAGACGGCCGGA TGAGAAGGATGCGTAG |