Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1424.t1
Gene name
Locationscaffold_005:232818..233781
Strand-
Gene length (bp)963
Transcript length (bp)747
Coding sequence length (bp)747
Protein length (aa) 249

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00857 Isochorismatase Isochorismatase family 1.5E-18 50 203

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1424.t1
MFKYSLACLALLATGCLSSTTTTTTSKPGYSRNITSTVTDPSFSFGQHYAVLNLDLIDGLVANVNTTKAGQLWID
NVANWIDAVHKQDPPPLSIFTRIFFSNTYRPELGNAPFASAVTSLGNATASSPDSQIYSAFKTLDNWDVVLQKAR
YYAGAGNQLEEILSSQKIDTVILSGIRTSGVVLSTALRLLDMNYNVYVISNNTIETPSTYAPLNQKIILEGILPE
LPVNVITIEQAIGALNRSGPAVY*
Coding >Ani_SJS100_1|g1424.t1
ATGTTCAAATACTCGCTTGCATGCCTGGCCCTCCTGGCAACCGGGTGTCTCTCATCAACCACAACCACAACCACT
AGCAAGCCAGGCTACTCGCGGAACATCACCTCGACCGTTACCGACCCCTCGTTCAGTTTCGGGCAACACTATGCA
GTGCTTAATCTAGATCTTATCGATGGATTGGTGGCAAATGTGAATACCACTAAGGCCGGGCAGCTATGGATTGAC
AATGTTGCGAATTGGATTGATGCCGTGCACAAGCAGGACCCTCCTCCCTTGAGTATCTTCACTCGCATCTTCTTC
TCCAACACTTACCGTCCTGAACTCGGCAACGCACCCTTCGCCAGCGCGGTGACTAGCCTCGGAAATGCCACAGCA
TCGAGTCCCGATAGCCAAATTTATTCTGCTTTCAAGACCCTAGATAATTGGGATGTGGTGCTGCAGAAAGCGCGG
TATTATGCTGGTGCTGGGAATCAGTTGGAGGAGATCCTCAGTAGTCAAAAGATTGATACGGTGATTCTGTCCGGC
ATCCGTACTTCGGGAGTAGTGCTTAGCACCGCGCTTCGTCTGTTGGACATGAACTATAATGTCTACGTTATCTCG
AACAATACGATCGAGACTCCCTCGACGTATGCGCCCCTGAATCAGAAGATTATCTTGGAGGGCATACTCCCCGAA
TTACCAGTCAATGTAATTACCATCGAACAGGCCATTGGGGCTCTCAACCGCTCCGGACCAGCTGTCTATTAG
Transcript >Ani_SJS100_1|g1424.t1
ATGTTCAAATACTCGCTTGCATGCCTGGCCCTCCTGGCAACCGGGTGTCTCTCATCAACCACAACCACAACCACT
AGCAAGCCAGGCTACTCGCGGAACATCACCTCGACCGTTACCGACCCCTCGTTCAGTTTCGGGCAACACTATGCA
GTGCTTAATCTAGATCTTATCGATGGATTGGTGGCAAATGTGAATACCACTAAGGCCGGGCAGCTATGGATTGAC
AATGTTGCGAATTGGATTGATGCCGTGCACAAGCAGGACCCTCCTCCCTTGAGTATCTTCACTCGCATCTTCTTC
TCCAACACTTACCGTCCTGAACTCGGCAACGCACCCTTCGCCAGCGCGGTGACTAGCCTCGGAAATGCCACAGCA
TCGAGTCCCGATAGCCAAATTTATTCTGCTTTCAAGACCCTAGATAATTGGGATGTGGTGCTGCAGAAAGCGCGG
TATTATGCTGGTGCTGGGAATCAGTTGGAGGAGATCCTCAGTAGTCAAAAGATTGATACGGTGATTCTGTCCGGC
ATCCGTACTTCGGGAGTAGTGCTTAGCACCGCGCTTCGTCTGTTGGACATGAACTATAATGTCTACGTTATCTCG
AACAATACGATCGAGACTCCCTCGACGTATGCGCCCCTGAATCAGAAGATTATCTTGGAGGGCATACTCCCCGAA
TTACCAGTCAATGTAATTACCATCGAACAGGCCATTGGGGCTCTCAACCGCTCCGGACCAGCTGTCTATTAG
Gene >Ani_SJS100_1|g1424.t1
ATGTTCAAATACTCGCTTGCATGCCTGGCCCTCCTGGCAACCGGGTGTCTCTCATCAACCACAACCACAACCACT
AGCAAGCCAGGCTACTCGCGGAACATCACCTCGACCGTTACCGACCCCTCGTTCAGTTTCGGGCAACACTATGCA
GTGCTTAATCTAGATCTTATCGATGGATTGGTGGCAAATGTGAATACCACTAAGGCCGGGCAGCTATGGATTGAC
AATGTTGCGAATTGGATTGATGCGTATGTACTCCATTGGACCTGAATACATTATCTCGGATCATACTCATGCTCT
AAAAGCGTGCACAAGCAGGACCCTCCTCCCTTGAGTATCTTCACTCGCATCTTCTTCTCCAACACTTACCGTCCT
GAACTCGGCAACGCACCCTTCGCCAGCGCGGTGACTAGCCTCGGAAATGCCACAGCATCGAGTCCCGATAGCCAA
ATTTATTCTGCTTTCAAGACCCTAGATAATTGGGATGTGGTGCTGCAGAAAGCGCGGTATTATGCTGGTGCTGGG
AATCAGTTGGAGGAGATCCTCAGTAGTCAAAAGATTGATACGGTGATTCTGGTAGGTGCAGCCATAAAACGGAAC
GGAAGTAAAGTCAACAGACTCAGTCAACAGGTTAGCTGACCACAAGTGTAACTGGTAGTCCGGCATCCGTACTTC
GGGAGTAGTGCTTAGCACCGCGCTTCGTCTGTTGGACATGAACTATAATGTGTAAGCCAGCATCACGATTCAAGA
CCAATCAGGAGAGAAAACAGTGGGCACTGCTAACGCATCGTGCTTGACGACAGCTACGTTATCTCGAACAATACG
ATCGAGACTCCCTCGACGTATGCGCCCCTGAATCAGAAGATTATCTTGGAGGGCATACTCCCCGAATTACCAGTC
AATGTAATTACCATCGAACAGGCCATTGGGGCTCTCAACCGCTCCGGACCAGCTGTCTATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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