Protein ID | Ani_SJS100_1|g1415.t1 |
Gene name | |
Location | scaffold_005:200691..202952 |
Strand | + |
Gene length (bp) | 2261 |
Transcript length (bp) | 1788 |
Coding sequence length (bp) | 1788 |
Protein length (aa) | 596 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08953 | DUF1899 | Domain of unknown function (DUF1899) | 1.2E-34 | 4 | 69 |
PF16300 | WD40_4 | Type of WD40 repeat | 5.5E-19 | 350 | 392 |
PF00400 | WD40 | WD domain, G-beta repeat | 1.0E-02 | 77 | 109 |
PF00400 | WD40 | WD domain, G-beta repeat | 1.0E-03 | 131 | 168 |
PF00400 | WD40 | WD domain, G-beta repeat | 3.6E-04 | 184 | 209 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1415.t1 MSGRFVRSSKYRHVFGRPTRKEQCYDNLRISKNAWDTNLVKANPKYLSVNWEAGGGGAFAVIPLEERGKLPERIP LFRGHTAVVLDTDWNPFNDDLIASGSDDGKVFLWRVPENFTLRPDLDPDEIQDVAPVGKLSGHPKKIGHVLFNPA AENILATASGDYTVKIWDIEAGAPKLTLNLGDIVQSQSWSANGSLLVTTSRDKKLRIWDVRQERPAHETQGHSGA KNSRSVWLGEHDRIATTGFSKMSDRQLALWDIRAPREPINGFKTLDSISGVCMPFWDEGTQCLYLAGRGDGNIRY FELENDKFEYLAEYKSADPQRGIAFMPKRGVNTHDNEVARAFKTVNDSYIEPISFIVPRRAETFQDDIYPPTTGL KPAMGPSEWLAGKEAIPPKISMANLYEGEGLKEVTGVQDAPTSTMGASEPEAAPAPKAAEPSPVKKAPEPAPEPT PVAKPAPSMKEQGASMAAMVSKFADDEEAETVEEDSSFEEVQKPVERPARSPEASSPSIKTSPWHQKEEEVKTQA ASPAKSSPVITPAAAPSDISTGAAVAADAVQREIGAIKDLIAEQTKTIASQAQQMQSLTAEIESLKAKLG* |
Coding | >Ani_SJS100_1|g1415.t1 ATGTCTGGTCGATTCGTGCGTTCCTCGAAATACCGACACGTCTTCGGACGGCCAACGAGAAAGGAGCAATGCTAT GACAATCTTCGTATTTCCAAGAACGCCTGGGATACCAACCTCGTCAAGGCCAACCCCAAATACCTCTCCGTAAAC TGGGAAGCTGGTGGTGGAGGTGCATTTGCTGTTATTCCTCTGGAGGAGCGCGGGAAGCTGCCTGAGAGAATACCT CTTTTCCGGGGTCACACTGCCGTGGTCCTCGATACCGACTGGAACCCTTTCAACGACGACCTGATTGCATCTGGA TCTGATGACGGCAAGGTCTTCCTTTGGCGTGTGCCGGAGAATTTCACTCTTCGCCCTGATCTTGATCCCGATGAG ATCCAAGATGTTGCACCCGTTGGCAAGCTTTCTGGTCATCCGAAGAAGATAGGCCACGTTCTTTTCAACCCCGCC GCCGAAAACATCCTGGCTACGGCCTCCGGCGATTATACCGTCAAGATCTGGGATATCGAAGCGGGCGCTCCGAAG CTGACTCTGAACCTGGGCGACATTGTACAATCACAGTCCTGGAGCGCGAACGGCTCCCTCTTGGTTACGACCTCG CGAGACAAGAAGCTGCGCATTTGGGATGTGCGTCAGGAACGCCCCGCGCATGAGACACAAGGACACTCTGGTGCC AAGAACAGCCGTTCGGTCTGGCTTGGTGAGCATGACAGGATCGCAACCACCGGTTTCTCGAAGATGAGTGACCGT CAGCTGGCTCTGTGGGATATCCGCGCTCCCCGGGAGCCCATCAACGGATTCAAGACCCTTGACTCGATCTCCGGT GTATGCATGCCTTTCTGGGATGAGGGCACTCAGTGTCTGTACCTTGCTGGAAGAGGTGATGGTAACATCCGCTAC TTCGAACTCGAGAACGACAAATTCGAATACCTTGCCGAATATAAGTCTGCCGATCCCCAGCGTGGTATCGCTTTC ATGCCCAAGCGTGGAGTCAACACTCACGACAACGAAGTCGCTCGTGCCTTCAAGACCGTTAACGACAGCTACATT GAACCTATTTCTTTCATCGTGCCCCGCCGTGCGGAGACCTTCCAGGACGATATTTACCCTCCTACAACTGGTCTG AAGCCTGCTATGGGCCCCTCTGAGTGGCTTGCAGGCAAGGAGGCCATCCCGCCCAAGATTTCCATGGCCAACCTT TACGAGGGCGAGGGTCTGAAGGAGGTCACCGGAGTGCAGGACGCCCCCACTTCCACCATGGGTGCCTCCGAACCC GAGGCGGCGCCGGCTCCCAAGGCCGCTGAGCCCAGTCCCGTGAAGAAGGCCCCCGAGCCCGCCCCCGAGCCGACG CCGGTGGCCAAGCCCGCCCCGTCCATGAAGGAGCAGGGTGCCTCGATGGCCGCCATGGTCTCTAAGTTTGCCGAC GATGAAGAGGCCGAGACCGTGGAGGAGGATTCGAGCTTTGAGGAGGTGCAGAAGCCCGTGGAGCGTCCTGCACGC TCTCCCGAAGCCTCATCTCCTTCCATCAAGACCAGCCCATGGCACCAGAAGGAAGAGGAGGTCAAGACCCAGGCA GCAAGCCCTGCTAAGTCTTCCCCCGTCATCACCCCTGCTGCCGCACCATCCGACATCTCCACCGGCGCTGCTGTC GCAGCAGACGCTGTTCAGCGCGAGATCGGAGCAATCAAGGACCTGATCGCCGAACAGACGAAGACGATCGCCTCC CAAGCGCAGCAGATGCAGAGCCTGACTGCCGAGATCGAGTCCCTCAAGGCTAAGCTGGGCTAG |
Transcript | >Ani_SJS100_1|g1415.t1 ATGTCTGGTCGATTCGTGCGTTCCTCGAAATACCGACACGTCTTCGGACGGCCAACGAGAAAGGAGCAATGCTAT GACAATCTTCGTATTTCCAAGAACGCCTGGGATACCAACCTCGTCAAGGCCAACCCCAAATACCTCTCCGTAAAC TGGGAAGCTGGTGGTGGAGGTGCATTTGCTGTTATTCCTCTGGAGGAGCGCGGGAAGCTGCCTGAGAGAATACCT CTTTTCCGGGGTCACACTGCCGTGGTCCTCGATACCGACTGGAACCCTTTCAACGACGACCTGATTGCATCTGGA TCTGATGACGGCAAGGTCTTCCTTTGGCGTGTGCCGGAGAATTTCACTCTTCGCCCTGATCTTGATCCCGATGAG ATCCAAGATGTTGCACCCGTTGGCAAGCTTTCTGGTCATCCGAAGAAGATAGGCCACGTTCTTTTCAACCCCGCC GCCGAAAACATCCTGGCTACGGCCTCCGGCGATTATACCGTCAAGATCTGGGATATCGAAGCGGGCGCTCCGAAG CTGACTCTGAACCTGGGCGACATTGTACAATCACAGTCCTGGAGCGCGAACGGCTCCCTCTTGGTTACGACCTCG CGAGACAAGAAGCTGCGCATTTGGGATGTGCGTCAGGAACGCCCCGCGCATGAGACACAAGGACACTCTGGTGCC AAGAACAGCCGTTCGGTCTGGCTTGGTGAGCATGACAGGATCGCAACCACCGGTTTCTCGAAGATGAGTGACCGT CAGCTGGCTCTGTGGGATATCCGCGCTCCCCGGGAGCCCATCAACGGATTCAAGACCCTTGACTCGATCTCCGGT GTATGCATGCCTTTCTGGGATGAGGGCACTCAGTGTCTGTACCTTGCTGGAAGAGGTGATGGTAACATCCGCTAC TTCGAACTCGAGAACGACAAATTCGAATACCTTGCCGAATATAAGTCTGCCGATCCCCAGCGTGGTATCGCTTTC ATGCCCAAGCGTGGAGTCAACACTCACGACAACGAAGTCGCTCGTGCCTTCAAGACCGTTAACGACAGCTACATT GAACCTATTTCTTTCATCGTGCCCCGCCGTGCGGAGACCTTCCAGGACGATATTTACCCTCCTACAACTGGTCTG AAGCCTGCTATGGGCCCCTCTGAGTGGCTTGCAGGCAAGGAGGCCATCCCGCCCAAGATTTCCATGGCCAACCTT TACGAGGGCGAGGGTCTGAAGGAGGTCACCGGAGTGCAGGACGCCCCCACTTCCACCATGGGTGCCTCCGAACCC GAGGCGGCGCCGGCTCCCAAGGCCGCTGAGCCCAGTCCCGTGAAGAAGGCCCCCGAGCCCGCCCCCGAGCCGACG CCGGTGGCCAAGCCCGCCCCGTCCATGAAGGAGCAGGGTGCCTCGATGGCCGCCATGGTCTCTAAGTTTGCCGAC GATGAAGAGGCCGAGACCGTGGAGGAGGATTCGAGCTTTGAGGAGGTGCAGAAGCCCGTGGAGCGTCCTGCACGC TCTCCCGAAGCCTCATCTCCTTCCATCAAGACCAGCCCATGGCACCAGAAGGAAGAGGAGGTCAAGACCCAGGCA GCAAGCCCTGCTAAGTCTTCCCCCGTCATCACCCCTGCTGCCGCACCATCCGACATCTCCACCGGCGCTGCTGTC GCAGCAGACGCTGTTCAGCGCGAGATCGGAGCAATCAAGGACCTGATCGCCGAACAGACGAAGACGATCGCCTCC CAAGCGCAGCAGATGCAGAGCCTGACTGCCGAGATCGAGTCCCTCAAGGCTAAGCTGGGCTAG |
Gene | >Ani_SJS100_1|g1415.t1 ATGTCTGGTCGATTCGTGCGTTCCTCGAAATACCGTGAGATCTTCTTCCCCTCCCCACAGGCTGCCCGCAATCTG ACAGGTAGTAGGACACGTCTTCGGACGGCCAACGAGAAAGGTGCGCTGCGAACCCCCTGGGCCCTTCTCAGAGTC GACATTATCTCACACTCATCGCAGGAGCAATGCTATGACAATCTTCGTATTTCCAAGAACGCCTGGGATACCAAC CTCGTCAAGGTTCGTCCGTTGTTGCCGCCGCCCCTAATCCACCACCTGCCAGGTCCGTCTGACACTACAACCAGG CCAACCCCAAATACCTCTCCGTAAACTGGGAAGCTGGTGGTGGAGGTGCATTTGCTGTTATTCCTCTGGAGGAGC GCGGGAAGCTGCCTGAGAGAATACCTCTTTTCCGGGGTCACACTGCCGTGGTCCTCGATACCGACTGGTGAGCAG TGGCTGTTGTGAACATCCTGATCGTAGCACACGACCAACATAAGTAGGAACCCTTTCAACGACGACCTGATTGCA TCTGGATCTGATGACGGCAAGGTATGATCTCTCTTATCGCATTCGCAGACCACTGCAGGGCCTCTGTCCATTGGT ACTAATTGATCGCATAATAGGTCTTCCTTTGGCGTGTGCCGGAGAATTTCACTCTTCGCCCTGATCTTGATCCCG ATGAGATCCAAGATGTTGCACCCGTTGGCAAGCTTTCTGGTCATCCGAAGTGAGTGAACTTTTATACCACTTTAA CGGTCGTGTTTCGCGAACGCATTCTGATGCCATCACAGGAAGATAGGCCACGTTCTTTTCAACCCCGCCGCCGAA AACATCCTGGCTACGGCCTCCGGCGATTATACCGTCAAGATCTGGGATATCGAAGCGGGCGCTCCGAAGCTGACT CTGAACCTGGGCGACATTGTACAATCACAGTCCTGGAGCGCGAACGGCTCCCTCTTGGTTACGACCTCGCGAGAC AAGAAGCTGCGCATTTGGGATGTGCGTCAGGAACGCCCCGCGCATGAGACACAAGGACACTCTGGTGCCAAGAAC AGCCGTTCGGTCTGGCTTGGTGAGCATGACAGGATCGCAACCACCGGTTTCTCGAAGATGAGTGACCGTCAGCTG GCTCTGTGGGATATCCGCGCTCCCCGGGAGCCCATCAACGGATTCAAGACCCTTGACTCGATCTCCGGTGTATGC ATGCCTTTCTGGGATGAGGGCACTCAGTGTCTGTACCTTGCTGGAAGAGGGTAAGTTTACGGAGATAACCAGGTA TTGGCCGTGGCTGACAATTTTTAGTGATGGTAACATCCGCTACTTCGAACTCGAGAACGACAAATTCGAATACCT TGCCGAATATAAGTCTGCCGATCCCCAGCGTGGTATCGCTTTCATGCCCAAGCGTGGAGTCAACACTCACGACAA CGAAGTCGCTCGTGCCTTCAAGACCGTTAACGACAGCTACATTGAACCTATTTCTTTCATCGTGCCCCGCCGTGC GGAGACCTTCCAGGACGATATTTACCCTCCTACAACTGGTCTGAAGCCTGCTATGGGCCCCTCTGAGTGGCTTGC AGGCAAGGAGGCCATCCCGCCCAAGATTTCCATGGCCAACCTTTACGAGGGCGAGGGTCTGAAGGAGGTCACCGG AGTGCAGGACGCCCCCACTTCCACCATGGGTGCCTCCGAACCCGAGGCGGCGCCGGCTCCCAAGGCCGCTGAGCC CAGTCCCGTGAAGAAGGCCCCCGAGCCCGCCCCCGAGCCGACGCCGGTGGCCAAGCCCGCCCCGTCCATGAAGGA GCAGGGTGCCTCGATGGCCGCCATGGTCTCTAAGTTTGCCGACGATGAAGAGGCCGAGACCGTGGAGGAGGATTC GAGCTTTGAGGAGGTGCAGAAGCCCGTGGAGCGTCCTGCACGCTCTCCCGAAGCCTCATCTCCTTCCATCAAGAC CAGCCCATGGCACCAGAAGGAAGAGGAGGTCAAGACCCAGGCAGCAAGCCCTGCTAAGGTAAGCAATCCTACATC ATCGAACAATACCCCTTCCCGAACTAACAATCCTTCAGTCTTCCCCCGTCATCACCCCTGCTGCCGCACCATCCG ACATCTCCACCGGCGCTGCTGTCGCAGCAGACGCTGTTCAGCGCGAGATCGGAGCAATCAAGGACCTGATCGCCG AACAGACGAAGACGATCGCCTCCCAAGCGCAGCAGATGCAGAGCCTGACTGCCGAGATCGAGTCCCTCAAGGCTA AGCTGGGCTAG |