© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1378.t1 |
| Gene name | |
| Location | scaffold_005:97304..98490 |
| Strand | + |
| Gene length (bp) | 1186 |
| Transcript length (bp) | 969 |
| Coding sequence length (bp) | 969 |
| Protein length (aa) | 323 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02558 | ApbA | Ketopantoate reductase PanE/ApbA | 1.6E-35 | 8 | 157 |
| PF08546 | ApbA_C | Ketopantoate reductase PanE/ApbA C terminal | 2.8E-34 | 189 | 312 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 24 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1378.t1 MASQVDVLLYGLGAIGSFYAFILHRSNKVRLTVVARSNYAAVKENGILLKSANHGEHRFYPDHVVRSPSELTHPV DYVVCTNKAIDPASAVHSLAPAIGNDTTIVIIQNGVGNEEPFCEAYPSCSIISCVTWVGASQPTPGTVIHTTSED TELGLYPNPKVSDAVEAERLNTFAGLLAAGQTRHTVHDNIQPTRWSKVIWNCAWNTLTTLTALDTQAFLQSSPDA IPFTRRLMSEAVAVARAAGVPLPDDLIDTQLARIQSLGAVRTSMQIDRENNRPMEIEVIVGTPVRKGRELGVPTP VLETLYVLLRAVDGETRRAQKI* |
| Coding | >Ani_SJS100_1|g1378.t1 ATGGCCAGTCAGGTTGATGTCCTTCTCTATGGGCTGGGAGCCATCGGTTCCTTCTACGCCTTCATTCTACATCGT AGTAACAAAGTTCGTCTGACCGTTGTCGCCCGGTCCAACTACGCAGCCGTCAAGGAGAATGGTATCCTTCTAAAA AGCGCAAACCACGGCGAGCATCGATTCTATCCAGACCACGTGGTCCGTTCGCCCTCAGAACTCACCCATCCAGTC GACTATGTTGTCTGCACCAACAAAGCCATTGACCCAGCCAGTGCCGTCCACTCCCTAGCACCAGCAATTGGCAAC GACACCACGATCGTGATCATCCAGAACGGCGTAGGGAATGAAGAGCCCTTCTGCGAGGCATACCCATCGTGCAGC ATCATCTCCTGCGTTACATGGGTCGGAGCCTCCCAGCCCACCCCAGGCACCGTTATACACACCACATCCGAAGAT ACCGAACTCGGTCTTTACCCGAACCCCAAGGTTTCAGATGCCGTGGAGGCTGAACGTCTCAACACGTTCGCGGGC CTCCTTGCCGCAGGTCAAACCCGTCACACCGTGCATGATAATATCCAACCGACCCGCTGGTCCAAAGTTATCTGG AACTGCGCCTGGAACACCCTGACGACCTTGACCGCTCTGGACACGCAGGCATTCTTGCAATCCTCCCCGGATGCC ATTCCCTTCACGCGACGGCTCATGAGCGAGGCCGTGGCGGTGGCTCGTGCTGCTGGTGTCCCTCTCCCGGATGAT CTGATCGACACCCAATTGGCACGGATCCAAAGTCTCGGGGCGGTGCGGACGAGTATGCAGATCGACCGGGAGAAT AACCGGCCGATGGAGATTGAGGTGATTGTAGGTACGCCAGTGCGTAAGGGGCGGGAGTTGGGCGTTCCTACGCCT GTGTTGGAGACGCTGTATGTACTGTTGCGAGCTGTCGATGGAGAGACGCGTCGGGCGCAGAAGATTTGA |
| Transcript | >Ani_SJS100_1|g1378.t1 ATGGCCAGTCAGGTTGATGTCCTTCTCTATGGGCTGGGAGCCATCGGTTCCTTCTACGCCTTCATTCTACATCGT AGTAACAAAGTTCGTCTGACCGTTGTCGCCCGGTCCAACTACGCAGCCGTCAAGGAGAATGGTATCCTTCTAAAA AGCGCAAACCACGGCGAGCATCGATTCTATCCAGACCACGTGGTCCGTTCGCCCTCAGAACTCACCCATCCAGTC GACTATGTTGTCTGCACCAACAAAGCCATTGACCCAGCCAGTGCCGTCCACTCCCTAGCACCAGCAATTGGCAAC GACACCACGATCGTGATCATCCAGAACGGCGTAGGGAATGAAGAGCCCTTCTGCGAGGCATACCCATCGTGCAGC ATCATCTCCTGCGTTACATGGGTCGGAGCCTCCCAGCCCACCCCAGGCACCGTTATACACACCACATCCGAAGAT ACCGAACTCGGTCTTTACCCGAACCCCAAGGTTTCAGATGCCGTGGAGGCTGAACGTCTCAACACGTTCGCGGGC CTCCTTGCCGCAGGTCAAACCCGTCACACCGTGCATGATAATATCCAACCGACCCGCTGGTCCAAAGTTATCTGG AACTGCGCCTGGAACACCCTGACGACCTTGACCGCTCTGGACACGCAGGCATTCTTGCAATCCTCCCCGGATGCC ATTCCCTTCACGCGACGGCTCATGAGCGAGGCCGTGGCGGTGGCTCGTGCTGCTGGTGTCCCTCTCCCGGATGAT CTGATCGACACCCAATTGGCACGGATCCAAAGTCTCGGGGCGGTGCGGACGAGTATGCAGATCGACCGGGAGAAT AACCGGCCGATGGAGATTGAGGTGATTGTAGGTACGCCAGTGCGTAAGGGGCGGGAGTTGGGCGTTCCTACGCCT GTGTTGGAGACGCTGTATGTACTGTTGCGAGCTGTCGATGGAGAGACGCGTCGGGCGCAGAAGATTTGA |
| Gene | >Ani_SJS100_1|g1378.t1 ATGGCCAGTCAGGTTGATGTCCTTCTCTATGGGCTGGGAGCGTATGCAAGATCTCCCATTTTCTGCGGAGCGACG AGTCTGACTAAATCGCAGCATCGGTTCCTTCTACGCCTTCATTCTACATCGTAGTAACAAAGTTCGTCTGACCGT TGTCGCCCGGTCCAACTACGCAGCCGTCAAGGAGAATGTGAGTCCTTCCAATAGCTCTCGAACGAATAAAACTCA CAGCGAATCAGGGTATCCTTCTAAAAAGCGCAAACCACGGCGAGCATCGATTCTATCCAGACCACGGTAACACCT TCCTCCCACTACTCACAGCCAGGACCACCAACTAACACGATCGCAAAGTGGTCCGTTCGCCCTCAGAACTCACCC ATCCAGTCGACTATGTTGTCTGCACCAACAAAGCCATTGACCCAGCCAGTGCCGTCCACTCCCTAGCACCAGCAA TTGGCAACGACACCACGATCGTGATCATCCAGAACGGCGTAGGGAATGAAGAGCCCTTCTGCGAGGCATACCCAT CGTGCAGCATCATCTCCTGCGTTGTATGTCTATTCCCCAACCTTCAACCTTATTCACAGCTAACCTTCCTGACTT CCCTCAGACATGGGTCGGAGCCTCCCAGCCCACCCCAGGCACCGTTATACACACCACATCCGAAGATACCGAACT CGGTCTTTACCCGAACCCCAAGGTTTCAGATGCCGTGGAGGCTGAACGTCTCAACACGTTCGCGGGCCTCCTTGC CGCAGGTCAAACCCGTCACACCGTGCATGATAATATCCAACCGACCCGCTGGTCCAAAGTTATCTGGAACTGCGC CTGGAACACCCTGACGACCTTGACCGCTCTGGACACGCAGGCATTCTTGCAATCCTCCCCGGATGCCATTCCCTT CACGCGACGGCTCATGAGCGAGGCCGTGGCGGTGGCTCGTGCTGCTGGTGTCCCTCTCCCGGATGATCTGATCGA CACCCAATTGGCACGGATCCAAAGTCTCGGGGCGGTGCGGACGAGTATGCAGATCGACCGGGAGAATAACCGGCC GATGGAGATTGAGGTGATTGTAGGTACGCCAGTGCGTAAGGGGCGGGAGTTGGGCGTTCCTACGCCTGTGTTGGA GACGCTGTATGTACTGTTGCGAGCTGTCGATGGAGAGACGCGTCGGGCGCAGAAGATTTGA |