© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1347.t1 |
| Gene name | |
| Location | scaffold_005:7320..9323 |
| Strand | + |
| Gene length (bp) | 2003 |
| Transcript length (bp) | 1605 |
| Coding sequence length (bp) | 1605 |
| Protein length (aa) | 535 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.7E-44 | 51 | 501 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 74 | 22 |
| 2 | 89 | 111 | 22 |
| 3 | 132 | 154 | 22 |
| 4 | 169 | 186 | 17 |
| 5 | 193 | 215 | 22 |
| 6 | 276 | 298 | 22 |
| 7 | 327 | 349 | 22 |
| 8 | 394 | 416 | 22 |
| 9 | 457 | 479 | 22 |
| 10 | 489 | 511 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1347.t1 MFSEAIETATTDKVIAAPDPDHGVGYSSTSKHKDDAIVHAHRHVQPMPRQFNWISALGLGFSITNSWVGYLSCFG QNLAYGGAQACIFSLVAAFMVQVIVTLGLAELASAFPSSGGQYHFCYILSPDRTKRYSAFVVGWLSILAWWVVTY VSLPSFEPVRVYTASQWQTYLMYLGASVVTIMPVFAAPKRISLVTQCALYLTLAGYLVFFVVMLSMHQQVQPGSF ILSSAQGNSGWSRGTAWILAINNSMYAYGSTDAVIHICEELPQPGRRVPQVMIMTLAIGAVTSISLFVALMFFVD DIDAVRDASLPSLELVYQITGNRRITLGLSIILAIIYAGGFTTSSRTISCSYTDKAASLPSQWVTCGRIAWAFSR DNGLPFPEYFSQISKTFNFPVHTTIAAFLFTSLYGLLYLASTTAFNSIITSAVLFLNITYTVPQGILLSSGRSSM PKRYLNLGWAGYFCNGFAVVWIVIQGVLTCLPPDPEVTLGSMNYVCVILVGVFLVINLLWVAVGRKRFSGPDIDW GVVKTGQRE* |
| Coding | >Ani_SJS100_1|g1347.t1 ATGTTTTCAGAAGCAATCGAGACAGCCACCACAGACAAAGTGATCGCCGCGCCCGATCCTGATCATGGCGTGGGG TACAGCTCCACGTCGAAGCACAAGGATGACGCCATTGTCCATGCTCATAGGCATGTCCAACCCATGCCTCGGCAA TTCAACTGGATCTCTGCACTTGGATTGGGGTTCTCCATTACGAACTCCTGGGTTGGTTACTTGAGTTGCTTCGGA CAGAACCTGGCCTACGGGGGCGCCCAAGCCTGCATTTTTAGTCTGGTCGCGGCATTCATGGTGCAGGTGATTGTC ACCTTGGGGCTTGCGGAGTTGGCATCTGCCTTCCCATCGAGTGGTGGCCAATACCACTTTTGCTACATCCTTAGT CCGGACCGCACGAAGCGGTATAGTGCCTTTGTTGTGGGATGGCTTTCGATTCTGGCGTGGTGGGTGGTCACGTAT GTTTCCCTACCCTCCTTCGAGCCTGTGCGAGTATACACCGCCAGTCAGTGGCAGACGTACCTGATGTATCTTGGT GCGTCCGTCGTAACAATCATGCCCGTATTCGCAGCGCCGAAGAGAATCTCCCTTGTCACTCAGTGTGCACTGTAC CTCACACTTGCGGGGTATTTGGTCTTTTTCGTTGTAATGCTCTCCATGCACCAGCAGGTTCAGCCAGGCTCATTC ATTCTCTCCTCGGCGCAAGGGAATAGCGGATGGAGCAGAGGCACAGCGTGGATACTCGCGATCAATAATTCCATG TATGCATACGGCAGCACAGATGCAGTGATTCATATCTGTGAGGAGCTCCCTCAACCAGGACGGCGCGTGCCGCAG GTAATGATCATGACCTTGGCCATAGGCGCGGTCACTAGTATATCATTATTCGTGGCATTGATGTTCTTCGTCGAC GATATTGATGCTGTGCGAGATGCTTCTCTTCCGAGTTTGGAATTGGTCTATCAAATAACTGGCAACCGCAGGATC ACACTAGGACTGTCTATTATTCTCGCGATAATCTACGCCGGTGGGTTTACGACCTCCTCCCGGACAATAAGCTGC TCATATACTGATAAAGCAGCATCCCTCCCCTCACAATGGGTAACATGCGGACGAATAGCGTGGGCATTTTCTAGA GACAACGGACTCCCCTTCCCCGAATACTTCTCCCAAATCAGCAAGACCTTCAACTTTCCGGTCCACACCACTATC GCAGCCTTCCTCTTCACCAGTCTCTACGGCCTGCTGTACCTCGCCTCCACGACCGCGTTCAACTCCATCATTACA TCTGCCGTGCTTTTCCTCAACATTACCTACACAGTCCCTCAGGGTATCCTGCTTTCCAGCGGCAGATCAAGCATG CCAAAACGGTATCTGAATCTAGGCTGGGCTGGGTATTTCTGCAATGGGTTTGCCGTTGTGTGGATTGTCATTCAG GGGGTATTGACGTGTCTACCGCCGGATCCTGAGGTTACCCTGGGATCGATGAACTACGTGTGTGTGATTCTGGTA GGGGTGTTTTTGGTGATTAATCTACTATGGGTTGCCGTGGGGAGGAAGAGGTTTAGTGGACCAGATATCGACTGG GGTGTGGTCAAGACCGGGCAAAGGGAGTGA |
| Transcript | >Ani_SJS100_1|g1347.t1 ATGTTTTCAGAAGCAATCGAGACAGCCACCACAGACAAAGTGATCGCCGCGCCCGATCCTGATCATGGCGTGGGG TACAGCTCCACGTCGAAGCACAAGGATGACGCCATTGTCCATGCTCATAGGCATGTCCAACCCATGCCTCGGCAA TTCAACTGGATCTCTGCACTTGGATTGGGGTTCTCCATTACGAACTCCTGGGTTGGTTACTTGAGTTGCTTCGGA CAGAACCTGGCCTACGGGGGCGCCCAAGCCTGCATTTTTAGTCTGGTCGCGGCATTCATGGTGCAGGTGATTGTC ACCTTGGGGCTTGCGGAGTTGGCATCTGCCTTCCCATCGAGTGGTGGCCAATACCACTTTTGCTACATCCTTAGT CCGGACCGCACGAAGCGGTATAGTGCCTTTGTTGTGGGATGGCTTTCGATTCTGGCGTGGTGGGTGGTCACGTAT GTTTCCCTACCCTCCTTCGAGCCTGTGCGAGTATACACCGCCAGTCAGTGGCAGACGTACCTGATGTATCTTGGT GCGTCCGTCGTAACAATCATGCCCGTATTCGCAGCGCCGAAGAGAATCTCCCTTGTCACTCAGTGTGCACTGTAC CTCACACTTGCGGGGTATTTGGTCTTTTTCGTTGTAATGCTCTCCATGCACCAGCAGGTTCAGCCAGGCTCATTC ATTCTCTCCTCGGCGCAAGGGAATAGCGGATGGAGCAGAGGCACAGCGTGGATACTCGCGATCAATAATTCCATG TATGCATACGGCAGCACAGATGCAGTGATTCATATCTGTGAGGAGCTCCCTCAACCAGGACGGCGCGTGCCGCAG GTAATGATCATGACCTTGGCCATAGGCGCGGTCACTAGTATATCATTATTCGTGGCATTGATGTTCTTCGTCGAC GATATTGATGCTGTGCGAGATGCTTCTCTTCCGAGTTTGGAATTGGTCTATCAAATAACTGGCAACCGCAGGATC ACACTAGGACTGTCTATTATTCTCGCGATAATCTACGCCGGTGGGTTTACGACCTCCTCCCGGACAATAAGCTGC TCATATACTGATAAAGCAGCATCCCTCCCCTCACAATGGGTAACATGCGGACGAATAGCGTGGGCATTTTCTAGA GACAACGGACTCCCCTTCCCCGAATACTTCTCCCAAATCAGCAAGACCTTCAACTTTCCGGTCCACACCACTATC GCAGCCTTCCTCTTCACCAGTCTCTACGGCCTGCTGTACCTCGCCTCCACGACCGCGTTCAACTCCATCATTACA TCTGCCGTGCTTTTCCTCAACATTACCTACACAGTCCCTCAGGGTATCCTGCTTTCCAGCGGCAGATCAAGCATG CCAAAACGGTATCTGAATCTAGGCTGGGCTGGGTATTTCTGCAATGGGTTTGCCGTTGTGTGGATTGTCATTCAG GGGGTATTGACGTGTCTACCGCCGGATCCTGAGGTTACCCTGGGATCGATGAACTACGTGTGTGTGATTCTGGTA GGGGTGTTTTTGGTGATTAATCTACTATGGGTTGCCGTGGGGAGGAAGAGGTTTAGTGGACCAGATATCGACTGG GGTGTGGTCAAGACCGGGCAAAGGGAGTGA |
| Gene | >Ani_SJS100_1|g1347.t1 ATGTTTTCAGAAGCAATCGAGACAGCCACCACAGACAAAGTGATCGCCGCGCCCGATCCTGATCATGGCGTGGGG TACAGCTCCACGTCGAAGCACAAGGATGACGCCATTGTCCATGCTCATAGGCATGTCCAACCCATGCCTCGGCAA TTCAACTGGATCTCTGCACTTGGATTGGGGTTCTCCATTACGAACTCCTGGGTTGGTTACTTGGTGAGCCAACTA TTGCCAAGAGCACTGCGAGCAGGTAACCTGTTCTAACAAATCCTTTACGGCTAGAGTTGCTTCGGACAGAACCTG GCCTACGGGGGCGCCCAAGCCTGCATTTTTAGTCTGGTCGCGGCATTCATGGTGCAGGTGATTGTCACCTTGGGG CTTGCGGAGTTGGCATCTGCCTTCCCAGTACGTCGTGCCGGTGGTCCCAACGACGTATATGTTGATAATGTCACA GTCGAGTGGTGGCCAATACCACTTTTGCTACATCCTTAGTCCGGACCGCACGAAGCGGTATAGTGCCTTTGTTGT GGGATGGCTTTCGATTCTGGCGTGGTGGGTGGTCACGTATGTTTCCCTACCCTCCTTCGAGCCTGTGCGAGGTAC AGCAACTCATACACTGCAGCTGCTCAGGCCTTTCCCTCGTTGCCGTTTGCATCAATGGAATTGCAAATTTCTATC ATCCAGTATACACCGCCAGTCAGTGGCAGACGTACCTGATGTATCTTGGTGCGTCCGTCGTAACAAGTAGGCTTA ATCAGGATTCGATTCTACACCAAGCACTGATCCATCCCACAGTCATGCCCGTATTCGCAGCGCCGAAGAGAATCT CCCTTGTCACTCAGTGTGCACTGTACCTCACACTTGCGGGGTATTTGGTCTTTTTCGTTGTAATGCTCTCCATGC ACCAGCAGGTTCAGCCAGGCTCATTCATTCTCTCCTCGGCGCAAGGGAATAGCGGATGGAGCAGAGGCACAGCGT GGATACTCGCGATCAATAATTCCATGTATGCATACGGCAGCACAGATGCAGGTAAGCGCTTCGTCTCCTCAACAA GAGGACACTGACCTAGGTAGTGATTCATATCTGTGAGGAGCTCCCTCAACCAGGACGGCGCGTGCCGCAGGTAAT GATCATGACCTTGGCCATAGGCGCGGTCACTAGTATATCATTATTCGTGGCATTGATGTTCTTCGTCGACGATAT TGATGCTGTGCGAGATGCTTCTCTTCCGAGTTTGGAATTGGTCTATCAAATGTGGGTCTCAACCTGATCCTAGTT GCTCCCGTTCTCATCCAACACCAATAGAACTGGCAACCGCAGGATCACACTAGGACTGTCTATTATTCTCGCGAT AATCTACGCCGGTGGGTTTACGACCTCCTCCCGGACAATAAGCTGCTCATATACTGATAAAGCAGCATCCCTCCC CTCACAATGGGTAACATGCGGACGAATAGCGTGGGCATTTTCTAGAGACGTGAGTTACCTCAGAATCCTATCCCT GTCAAATCCACATAACAGCTATACAGAACGGACTCCCCTTCCCCGAATACTTCTCCCAAATCAGCAAGACCTTCA ACTTTCCGGTCCACACCACTATCGCAGCCTTCCTCTTCACCAGTCTCTACGGCCTGCTGTACCTCGCCTCCACGA CCGCGTTCAACTCCATCATTACATCTGCCGTGCTTTTCCTCAACATTACCTACACAGTCCCTCAGGGTATCCTGC TTTCCAGCGGCAGATCAAGCATGCCAAAACGGTATCTGAATCTAGGCTGGGCTGGGTATTTCTGCAATGGGTTTG CCGTTGTGTGGATTGTCATTCAGGGGGTATTGACGTGTCTACCGCCGGATCCTGAGGTTACCCTGGGATCGATGA ACTACGTGTGTGTGATTCTGGTAGGGGTGTTTTTGGTGATTAATCTACTATGGGTTGCCGTGGGGAGGAAGAGGT TTAGTGGACCAGATATCGACTGGGGTGTGGTCAAGACCGGGCAAAGGGAGTGA |