Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1346.t1
Gene name
Locationscaffold_005:5789..6832
Strand-
Gene length (bp)1043
Transcript length (bp)933
Coding sequence length (bp)933
Protein length (aa) 311

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05721 PhyH Phytanoyl-CoA dioxygenase (PhyH) 4.4E-19 29 235

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1346.t1
MPFNPSKYSDEVQKVSKDTPLEEIIYLLKRDGGVFVKGLISEADVDQAHQEAKPRLDADVEWNGSFFPAQTQRAP
SLIAHSPTYTKTQVMNPLFCQVCDHFLTSRRWYWWGEEKKMSLSKPYVHSCTAMRIGPGAKAQPLHRDDYINHRY
HAEIGQWDDVRDMERESAVGLFVAGCRVTRENGGTQFIPRSHLWGTDRTTPPKVEQCIFADMEKGDGFIMLASAF
HGGGSNITKDEYRLVFATFVVRGYLRQEENQFLAVPADVARRYDRETLDFMGYAMSEPACGYVEQMDPIYHLCPE
LKENERPRDF*
Coding >Ani_SJS100_1|g1346.t1
ATGCCGTTCAATCCCAGCAAGTACAGCGACGAAGTTCAGAAAGTGTCCAAGGACACCCCTCTGGAGGAAATCATC
TATCTACTTAAACGAGATGGGGGCGTATTCGTGAAGGGTCTCATTTCAGAAGCAGACGTCGACCAAGCTCACCAA
GAAGCCAAACCTCGTTTGGACGCAGACGTGGAATGGAATGGCTCCTTCTTTCCGGCACAAACTCAACGCGCACCG
TCTCTGATCGCGCACAGCCCGACCTACACCAAGACTCAAGTCATGAATCCGCTGTTTTGCCAAGTCTGCGACCAT
TTTCTAACCTCCCGACGATGGTACTGGTGGGGAGAAGAGAAGAAGATGTCTCTGTCTAAGCCATACGTGCACTCC
TGCACGGCCATGAGGATTGGCCCCGGCGCCAAGGCGCAGCCCTTGCATCGCGATGATTACATTAACCATCGCTAT
CATGCCGAAATTGGCCAGTGGGATGATGTGCGGGATATGGAGCGCGAGTCTGCCGTTGGTCTCTTTGTAGCTGGC
TGTCGCGTCACCCGGGAGAATGGTGGAACGCAGTTTATTCCTCGCAGCCATCTCTGGGGCACAGATCGCACTACA
CCTCCAAAGGTCGAGCAATGTATTTTCGCTGATATGGAAAAAGGCGATGGCTTCATCATGCTGGCGTCGGCATTC
CATGGAGGGGGCTCGAACATCACCAAAGACGAGTACAGGCTAGTCTTCGCCACGTTCGTTGTTCGAGGCTACCTG
CGCCAGGAAGAGAACCAGTTCCTGGCGGTGCCGGCGGATGTCGCGCGCAGGTATGACCGGGAGACTTTGGATTTT
ATGGGCTATGCCATGAGCGAGCCAGCTTGTGGTTACGTGGAGCAGATGGATCCCATCTATCATCTTTGCCCGGAG
CTCAAGGAAAATGAGCGGCCGCGGGACTTTTAG
Transcript >Ani_SJS100_1|g1346.t1
ATGCCGTTCAATCCCAGCAAGTACAGCGACGAAGTTCAGAAAGTGTCCAAGGACACCCCTCTGGAGGAAATCATC
TATCTACTTAAACGAGATGGGGGCGTATTCGTGAAGGGTCTCATTTCAGAAGCAGACGTCGACCAAGCTCACCAA
GAAGCCAAACCTCGTTTGGACGCAGACGTGGAATGGAATGGCTCCTTCTTTCCGGCACAAACTCAACGCGCACCG
TCTCTGATCGCGCACAGCCCGACCTACACCAAGACTCAAGTCATGAATCCGCTGTTTTGCCAAGTCTGCGACCAT
TTTCTAACCTCCCGACGATGGTACTGGTGGGGAGAAGAGAAGAAGATGTCTCTGTCTAAGCCATACGTGCACTCC
TGCACGGCCATGAGGATTGGCCCCGGCGCCAAGGCGCAGCCCTTGCATCGCGATGATTACATTAACCATCGCTAT
CATGCCGAAATTGGCCAGTGGGATGATGTGCGGGATATGGAGCGCGAGTCTGCCGTTGGTCTCTTTGTAGCTGGC
TGTCGCGTCACCCGGGAGAATGGTGGAACGCAGTTTATTCCTCGCAGCCATCTCTGGGGCACAGATCGCACTACA
CCTCCAAAGGTCGAGCAATGTATTTTCGCTGATATGGAAAAAGGCGATGGCTTCATCATGCTGGCGTCGGCATTC
CATGGAGGGGGCTCGAACATCACCAAAGACGAGTACAGGCTAGTCTTCGCCACGTTCGTTGTTCGAGGCTACCTG
CGCCAGGAAGAGAACCAGTTCCTGGCGGTGCCGGCGGATGTCGCGCGCAGGTATGACCGGGAGACTTTGGATTTT
ATGGGCTATGCCATGAGCGAGCCAGCTTGTGGTTACGTGGAGCAGATGGATCCCATCTATCATCTTTGCCCGGAG
CTCAAGGAAAATGAGCGGCCGCGGGACTTTTAG
Gene >Ani_SJS100_1|g1346.t1
ATGCCGTTCAATCCCAGCAAGTACAGCGACGAAGTTCAGAAAGTGTCCAAGGACACCCCTCTGGAGGAAATCATC
TATCTACTTAAACGAGATGGGGGCGTATTCGTGAAGGGTCTCATTTCAGAAGCAGACGTCGACCAAGCTCACCAA
GAAGCCAAACCTCGTTTGGACGCAGACGTGGAATGGAATGGCTCCTTCTTTCCGGGTGAGTCTGCTCTTTGCTGT
TCCGTCTCGGACCGGCGCAGCTCATTTATCAGCACAAACTCAACGCGCACCGTCTCTGATCGCGCACAGCCCGAC
CTACACCAAGACTCAAGTCATGAATCCGCTGTTTTGCCAAGTCTGCGACCATTTTCTAACCTCCCGACGATGGTA
CTGGTGGGGAGAAGAGAAGAAGATGTCTCTGTCTAAGCCATACGTGCACTCCTGCACGGCCATGAGGATTGGCCC
CGGCGCCAAGGCGCAGCCCTTGCATCGCGATGATTACATTAACCATCGCTATCATGCCGAAATTGGCCAGTGGGA
TGATGTGCGGGATATGGAGCGCGAGTCTGCCGTTGGTCTCTTTGTAGCTGGCTGTCGCGTCACCCGGGAGAATGG
TGGAACGCAGTTTATTCCTCGCAGCCATCTCTGGTGGGTGGAATGACTCCTGACTACCAATGCGTTTAGTCATGT
CTGATAGACAAAGCAGGGGCACAGATCGCACTACACCTCCAAAGGTCGAGCAATGTATTTTCGCTGATATGGAAA
AAGGCGATGGCTTCATCATGCTGGCGTCGGCATTCCATGGAGGGGGCTCGAACATCACCAAAGACGAGTACAGGC
TAGTCTTCGCCACGTTCGTTGTTCGAGGCTACCTGCGCCAGGAAGAGAACCAGTTCCTGGCGGTGCCGGCGGATG
TCGCGCGCAGGTATGACCGGGAGACTTTGGATTTTATGGGCTATGCCATGAGCGAGCCAGCTTGTGGTTACGTGG
AGCAGATGGATCCCATCTATCATCTTTGCCCGGAGCTCAAGGAAAATGAGCGGCCGCGGGACTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail