© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1341.t1 |
| Gene name | |
| Location | scaffold_004:805161..806420 |
| Strand | + |
| Gene length (bp) | 1259 |
| Transcript length (bp) | 759 |
| Coding sequence length (bp) | 759 |
| Protein length (aa) | 253 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12138 | Spherulin4 | Spherulation-specific family 4 | 5.8E-73 | 7 | 248 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1341.t1 MGPKASVFVPLYVYPAPGAWDPLEKVISSHPDVNFTVVVNPGSGPGPNALPDGNYTREIPKLASYGNVRLLGYVA TTYGQRNFSLVRRDIETYAAWPTNSSNPNLAVRGIFFDETPQQYESNTLAYLQDLTAVVKTTTGLGPDHFVVHNP GTIPDARYLPTADSTVVFEATYETFLERQGAKLFQEIPNSTRSQLCAVVHSVPDSVEGHKFRDLVKQVRKVADEI FITHLDTDYYASFGGQWEEFVELMARS* |
| Coding | >Ani_SJS100_1|g1341.t1 ATGGGCCCTAAAGCATCAGTTTTCGTACCGCTCTACGTCTACCCTGCCCCGGGAGCATGGGATCCCTTAGAAAAG GTGATCTCTTCTCATCCCGACGTCAATTTCACCGTCGTGGTCAATCCTGGTAGTGGTCCAGGGCCCAACGCCTTG CCCGATGGAAATTACACACGAGAGATACCCAAGCTGGCGTCTTATGGCAACGTCCGCCTCCTAGGCTATGTTGCT ACCACGTACGGGCAGCGCAACTTCTCGTTGGTGCGGCGGGACATTGAGACCTATGCGGCGTGGCCGACCAACAGT TCGAACCCCAATCTAGCGGTTCGGGGTATATTTTTCGACGAAACCCCCCAGCAATACGAAAGCAATACCTTGGCC TACCTCCAAGATCTGACTGCTGTCGTGAAGACAACCACCGGCCTGGGTCCGGACCATTTTGTCGTCCATAATCCC GGCACGATCCCTGATGCCCGCTACTTGCCGACGGCTGATTCGACTGTGGTCTTTGAGGCAACCTACGAGACGTTC TTGGAGCGTCAAGGGGCTAAGCTGTTTCAGGAAATCCCGAACAGCACTCGCAGCCAGCTGTGCGCCGTGGTCCAC TCGGTGCCAGACAGCGTGGAAGGGCACAAGTTCCGAGACCTGGTGAAGCAAGTGCGCAAGGTCGCCGATGAGATT TTCATCACTCATCTGGATACAGATTATTATGCGAGTTTTGGCGGCCAATGGGAGGAATTTGTGGAACTAATGGCT CGATCGTGA |
| Transcript | >Ani_SJS100_1|g1341.t1 ATGGGCCCTAAAGCATCAGTTTTCGTACCGCTCTACGTCTACCCTGCCCCGGGAGCATGGGATCCCTTAGAAAAG GTGATCTCTTCTCATCCCGACGTCAATTTCACCGTCGTGGTCAATCCTGGTAGTGGTCCAGGGCCCAACGCCTTG CCCGATGGAAATTACACACGAGAGATACCCAAGCTGGCGTCTTATGGCAACGTCCGCCTCCTAGGCTATGTTGCT ACCACGTACGGGCAGCGCAACTTCTCGTTGGTGCGGCGGGACATTGAGACCTATGCGGCGTGGCCGACCAACAGT TCGAACCCCAATCTAGCGGTTCGGGGTATATTTTTCGACGAAACCCCCCAGCAATACGAAAGCAATACCTTGGCC TACCTCCAAGATCTGACTGCTGTCGTGAAGACAACCACCGGCCTGGGTCCGGACCATTTTGTCGTCCATAATCCC GGCACGATCCCTGATGCCCGCTACTTGCCGACGGCTGATTCGACTGTGGTCTTTGAGGCAACCTACGAGACGTTC TTGGAGCGTCAAGGGGCTAAGCTGTTTCAGGAAATCCCGAACAGCACTCGCAGCCAGCTGTGCGCCGTGGTCCAC TCGGTGCCAGACAGCGTGGAAGGGCACAAGTTCCGAGACCTGGTGAAGCAAGTGCGCAAGGTCGCCGATGAGATT TTCATCACTCATCTGGATACAGATTATTATGCGAGTTTTGGCGGCCAATGGGAGGAATTTGTGGAACTAATGGCT CGATCGTGA |
| Gene | >Ani_SJS100_1|g1341.t1 ATGGGCCCTAAAGCATCAGTTTTCGTACCGCTCTACGTCTACCCTGCCCCGGGAGCATGGGATCCCTTAGAAAAG GTGTAGGTGCTTTTTTCCTTTTGTTATCCCCTTCTCCATATCTCAACAAGCCCTCGCCAAATGTTAACCCCCCTC CCCCTTCCCCTTCCCCCCGCCAACCACATTGTACTCCAGTCCATGCCCACGCTATCTGTCAGCCACCGGATGTCC CGCGGCACGATACAAGTAACCCTGATGTACGAAGGACGCAGCTGAACGCCACAGGATCTCTTCTCATCCCGACGT CAATTTCACCGTCGTGGTCAATCCTGGTAGTGGTCCAGGGCCCAACGCCTTGCCCGATGGAAATTACACACGAGA GATACCCAAGCTGGCGTCTTATGGCAACGTCCGCCTCCTAGGCTATGTTGCTACCACGTACGGGCAGCGCAACTT CTCGTTGGTGCGGCGGGACATTGAGACCTATGCGGCGTGGCCGACCAACAGTTCGAACCCCAATCTAGCGGTTCG GGGTATATTTTTCGACGAAACCCCCCAGCAATACGAAAGCAATACCTTGGCCTACCTCCAAGATCTGACTGCTGT CGTGAAGACAACCACCGGCCTGGGTCCGGACCATTTTGTACGTGCAGAAGTCTCTCCCGTATTTTCATTCTTTCA TTACTAGGGGTAACGCCGGGTAATTTACACCATTACCAAATTTCGGCAGCTGGCATTTCCGCCCACTCGCTCATT GCCTTTTGCTGCCCCCTCAAACGCATGGTTCTTTTTCTCTTTGCTTTTTTTGGATGCTTCTGTTCTGGCTCCTGT TCCTGCCGACAATCCTCATCCAGAGCCGTCGTTTGGATCGCCCGGATAGATCTGGATGGACGCCCACCATTGGCC CGAGTTTACCATGCTAACGAGACTGTCTCAACTAGGTCGTCCATAATCCCGGCACGATCCCTGATGCCCGCTACT TGCCGACGGCTGATTCGACTGTGGTCTTTGAGGCAACCTACGAGACGTTCTTGGAGCGTCAAGGGGCTAAGCTGT TTCAGGAAATCCCGAACAGCACTCGCAGCCAGCTGTGCGCCGTGGTCCACTCGGTGCCAGACAGCGTGGAAGGGC ACAAGTTCCGAGACCTGGTGAAGCAAGTGCGCAAGGTCGCCGATGAGATTTTCATCACTCATCTGGATACAGATT ATTATGCGAGTTTTGGCGGCCAATGGGAGGAATTTGTGGAACTAATGGCTCGATCGTGA |