Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g1340.t1
Gene name
Location	scaffold_004:802772..804059
Strand	-
Gene length (bp)	1287
Transcript length (bp)	1287
Coding sequence length (bp)	1287
Protein length (aa)	429

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16363	GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	1.7E-37	50	414
PF01370	Epimerase	NAD dependent epimerase/dehydratase family	4.0E-36	49	344
PF07993	NAD_binding_4	Male sterility protein	5.5E-08	51	254
PF02719	Polysacc_synt_2	Polysaccharide biosynthesis protein	4.0E-06	49	191

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g1340.t1 MESPRQSDASTPVEPCSPGCVDTPATQSSVLFDGNLEELLRNFPLDQYILVTGGLGFIGSHTTLELLKAGYNVIV IDNLSNSFQSVFDRIRQLAAKYHDQEGTCMPSLQLHAHDFRDIAALRGLLEQYQIQSRWGTPKSRIGGVIHFAAY KAVEESIRNPLKYYANNVSGLIDFATTLGEFGIKTFIFSSSATVYGTLATSGLPLKEELCVHKEEVYSDQDGLEQ TVKPGCTGITNPYGRTKWICEAILADLAASDPEWTIVALRYFNPIGCDESGLLGEDPRQTPTNLLPVVVKVMTGQ YKELQMFGTDWDTEDGTAVRDFIHVTDLARGHIAALNAANGGKLVENFRTFNLGTGRGHSVMEVVNTMEAVSSKP IPRKAAGRRAGDVGSCVAVATRSQDELEWKTEKSLKDACVSLCNFLNVSGLSS*
Coding	>Ani_SJS100_1\|g1340.t1 ATGGAGAGCCCTCGACAGTCCGATGCAAGCACTCCTGTGGAGCCTTGCTCCCCTGGTTGCGTTGACACGCCGGCG ACGCAATCTTCCGTGTTGTTTGATGGCAACCTTGAAGAGTTGCTGCGCAACTTTCCCCTCGATCAGTACATCCTC GTCACAGGGGGTCTCGGGTTCATCGGCAGTCACACAACATTGGAGCTACTCAAAGCCGGCTATAATGTAATTGTG ATCGACAATCTCAGCAACTCTTTCCAGAGCGTCTTCGACCGCATCAGACAACTGGCCGCAAAGTACCATGACCAG GAGGGGACATGCATGCCGTCATTGCAGCTCCACGCCCATGATTTCCGGGATATTGCTGCTCTTAGAGGCCTTCTT GAGCAGTATCAGATCCAATCCAGATGGGGAACTCCCAAGTCCAGAATTGGTGGCGTCATCCACTTTGCTGCTTAT AAGGCTGTGGAAGAGAGTATCAGGAACCCCTTGAAGTATTACGCGAACAATGTTAGTGGTCTTATCGACTTTGCC ACAACTTTGGGAGAATTTGGAATTAAAACATTCATTTTCTCCTCCTCCGCCACGGTGTACGGAACCTTGGCAACT TCGGGTCTTCCCTTAAAGGAAGAACTCTGTGTCCATAAAGAAGAGGTCTACAGTGACCAAGACGGTCTGGAACAG ACCGTTAAACCTGGCTGCACGGGTATTACGAACCCGTATGGGCGCACCAAATGGATCTGCGAAGCCATATTAGCG GACCTTGCGGCTTCTGATCCAGAATGGACCATTGTAGCCCTACGCTATTTCAACCCTATAGGATGTGACGAATCT GGCCTTTTGGGAGAGGATCCCAGGCAGACGCCCACGAACCTTCTCCCGGTTGTGGTAAAAGTCATGACCGGACAA TATAAGGAGCTGCAGATGTTTGGCACGGACTGGGACACTGAGGATGGCACTGCAGTTCGCGATTTCATCCATGTC ACCGATCTTGCTAGGGGACATATTGCTGCGCTCAACGCCGCCAACGGTGGAAAGCTGGTTGAGAACTTCCGTACC TTCAACCTGGGCACCGGACGGGGTCACTCTGTGATGGAGGTGGTCAACACAATGGAAGCAGTGTCTTCCAAACCT ATTCCCAGAAAAGCTGCAGGTCGTCGCGCTGGAGATGTTGGCTCTTGCGTCGCTGTCGCCACAAGATCCCAGGAC GAGCTCGAATGGAAGACCGAAAAATCTCTGAAGGATGCTTGCGTGAGCCTATGCAATTTCCTCAATGTCAGCGGC CTGTCCTCTTAG
Transcript	>Ani_SJS100_1\|g1340.t1 ATGGAGAGCCCTCGACAGTCCGATGCAAGCACTCCTGTGGAGCCTTGCTCCCCTGGTTGCGTTGACACGCCGGCG ACGCAATCTTCCGTGTTGTTTGATGGCAACCTTGAAGAGTTGCTGCGCAACTTTCCCCTCGATCAGTACATCCTC GTCACAGGGGGTCTCGGGTTCATCGGCAGTCACACAACATTGGAGCTACTCAAAGCCGGCTATAATGTAATTGTG ATCGACAATCTCAGCAACTCTTTCCAGAGCGTCTTCGACCGCATCAGACAACTGGCCGCAAAGTACCATGACCAG GAGGGGACATGCATGCCGTCATTGCAGCTCCACGCCCATGATTTCCGGGATATTGCTGCTCTTAGAGGCCTTCTT GAGCAGTATCAGATCCAATCCAGATGGGGAACTCCCAAGTCCAGAATTGGTGGCGTCATCCACTTTGCTGCTTAT AAGGCTGTGGAAGAGAGTATCAGGAACCCCTTGAAGTATTACGCGAACAATGTTAGTGGTCTTATCGACTTTGCC ACAACTTTGGGAGAATTTGGAATTAAAACATTCATTTTCTCCTCCTCCGCCACGGTGTACGGAACCTTGGCAACT TCGGGTCTTCCCTTAAAGGAAGAACTCTGTGTCCATAAAGAAGAGGTCTACAGTGACCAAGACGGTCTGGAACAG ACCGTTAAACCTGGCTGCACGGGTATTACGAACCCGTATGGGCGCACCAAATGGATCTGCGAAGCCATATTAGCG GACCTTGCGGCTTCTGATCCAGAATGGACCATTGTAGCCCTACGCTATTTCAACCCTATAGGATGTGACGAATCT GGCCTTTTGGGAGAGGATCCCAGGCAGACGCCCACGAACCTTCTCCCGGTTGTGGTAAAAGTCATGACCGGACAA TATAAGGAGCTGCAGATGTTTGGCACGGACTGGGACACTGAGGATGGCACTGCAGTTCGCGATTTCATCCATGTC ACCGATCTTGCTAGGGGACATATTGCTGCGCTCAACGCCGCCAACGGTGGAAAGCTGGTTGAGAACTTCCGTACC TTCAACCTGGGCACCGGACGGGGTCACTCTGTGATGGAGGTGGTCAACACAATGGAAGCAGTGTCTTCCAAACCT ATTCCCAGAAAAGCTGCAGGTCGTCGCGCTGGAGATGTTGGCTCTTGCGTCGCTGTCGCCACAAGATCCCAGGAC GAGCTCGAATGGAAGACCGAAAAATCTCTGAAGGATGCTTGCGTGAGCCTATGCAATTTCCTCAATGTCAGCGGC CTGTCCTCTTAG
Gene	>Ani_SJS100_1\|g1340.t1 ATGGAGAGCCCTCGACAGTCCGATGCAAGCACTCCTGTGGAGCCTTGCTCCCCTGGTTGCGTTGACACGCCGGCG ACGCAATCTTCCGTGTTGTTTGATGGCAACCTTGAAGAGTTGCTGCGCAACTTTCCCCTCGATCAGTACATCCTC GTCACAGGGGGTCTCGGGTTCATCGGCAGTCACACAACATTGGAGCTACTCAAAGCCGGCTATAATGTAATTGTG ATCGACAATCTCAGCAACTCTTTCCAGAGCGTCTTCGACCGCATCAGACAACTGGCCGCAAAGTACCATGACCAG GAGGGGACATGCATGCCGTCATTGCAGCTCCACGCCCATGATTTCCGGGATATTGCTGCTCTTAGAGGCCTTCTT GAGCAGTATCAGATCCAATCCAGATGGGGAACTCCCAAGTCCAGAATTGGTGGCGTCATCCACTTTGCTGCTTAT AAGGCTGTGGAAGAGAGTATCAGGAACCCCTTGAAGTATTACGCGAACAATGTTAGTGGTCTTATCGACTTTGCC ACAACTTTGGGAGAATTTGGAATTAAAACATTCATTTTCTCCTCCTCCGCCACGGTGTACGGAACCTTGGCAACT TCGGGTCTTCCCTTAAAGGAAGAACTCTGTGTCCATAAAGAAGAGGTCTACAGTGACCAAGACGGTCTGGAACAG ACCGTTAAACCTGGCTGCACGGGTATTACGAACCCGTATGGGCGCACCAAATGGATCTGCGAAGCCATATTAGCG GACCTTGCGGCTTCTGATCCAGAATGGACCATTGTAGCCCTACGCTATTTCAACCCTATAGGATGTGACGAATCT GGCCTTTTGGGAGAGGATCCCAGGCAGACGCCCACGAACCTTCTCCCGGTTGTGGTAAAAGTCATGACCGGACAA TATAAGGAGCTGCAGATGTTTGGCACGGACTGGGACACTGAGGATGGCACTGCAGTTCGCGATTTCATCCATGTC ACCGATCTTGCTAGGGGACATATTGCTGCGCTCAACGCCGCCAACGGTGGAAAGCTGGTTGAGAACTTCCGTACC TTCAACCTGGGCACCGGACGGGGTCACTCTGTGATGGAGGTGGTCAACACAATGGAAGCAGTGTCTTCCAAACCT ATTCCCAGAAAAGCTGCAGGTCGTCGCGCTGGAGATGTTGGCTCTTGCGTCGCTGTCGCCACAAGATCCCAGGAC GAGCTCGAATGGAAGACCGAAAAATCTCTGAAGGATGCTTGCGTGAGCCTATGCAATTTCCTCAATGTCAGCGGC CTGTCCTCTTAG

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