© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1331.t1 |
| Gene name | |
| Location | scaffold_004:776791..777785 |
| Strand | + |
| Gene length (bp) | 994 |
| Transcript length (bp) | 882 |
| Coding sequence length (bp) | 882 |
| Protein length (aa) | 294 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05630 | NPP1 | Necrosis inducing protein (NPP1) | 1.7E-04 | 113 | 191 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 24 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1331.t1 MWLKSKYIVVALLAAPAAAVTPISNDEMTNFLSQGAVELATRYAPLWFFGQAVDQPPCYPTWAFGGSPNSSDIYD AAHKTPAAPQCEYPDVGCGCRKPGIATGNPGPAFPIYYTFKQCNETEVRVVYNLFYEKDGAEVLDLIDTGHDYDW ERVIIIHSRNANNTWQPSRALLSAHSGYHNLAWSSIHSTLTTEQINAGDARKPDGVKNNDHPKVYVSWSKHAHFD TIDTTWLDPLSQSLDNAFRSNDWWHFVDPKYYIRSDNSTAAGKAFNSTDWGSATSNPPYVQESVCSVP* |
| Coding | >Ani_SJS100_1|g1331.t1 ATGTGGCTAAAAAGCAAATACATCGTGGTGGCTCTTCTTGCCGCACCGGCGGCAGCCGTCACACCGATATCCAAC GATGAAATGACCAACTTCCTCAGCCAAGGCGCTGTAGAGCTCGCTACCCGGTATGCGCCTCTCTGGTTCTTTGGC CAGGCAGTGGATCAGCCTCCTTGTTATCCGACCTGGGCTTTCGGAGGCTCACCCAACTCGTCGGACATATACGAC GCGGCTCACAAAACACCCGCCGCACCGCAGTGCGAGTATCCAGACGTGGGCTGTGGGTGTCGCAAACCTGGAATA GCGACAGGGAACCCCGGACCCGCATTCCCCATCTACTACACGTTTAAGCAGTGCAATGAGACCGAAGTTCGGGTG GTGTACAACCTGTTCTATGAGAAGGACGGAGCCGAGGTGCTGGACCTGATTGACACGGGCCATGACTATGACTGG GAACGAGTCATCATCATCCATTCAAGAAATGCGAACAACACCTGGCAGCCCTCTCGTGCACTCCTTTCAGCCCAT AGTGGCTACCATAATCTCGCCTGGAGCAGCATTCATAGCACTCTGACCACAGAGCAAATCAACGCCGGAGATGCT CGAAAGCCCGATGGAGTCAAGAACAATGACCACCCAAAGGTGTATGTGTCGTGGTCGAAGCATGCACATTTCGAT ACCATAGATACTACCTGGCTCGATCCGCTGAGCCAGTCACTCGATAATGCGTTTCGCAGCAACGACTGGTGGCAC TTTGTCGACCCGAAGTACTATATCCGATCGGATAACTCGACCGCAGCTGGAAAAGCCTTCAACAGTACGGATTGG GGATCAGCGACGAGTAACCCGCCATATGTGCAGGAGAGTGTATGCTCTGTGCCGTAA |
| Transcript | >Ani_SJS100_1|g1331.t1 ATGTGGCTAAAAAGCAAATACATCGTGGTGGCTCTTCTTGCCGCACCGGCGGCAGCCGTCACACCGATATCCAAC GATGAAATGACCAACTTCCTCAGCCAAGGCGCTGTAGAGCTCGCTACCCGGTATGCGCCTCTCTGGTTCTTTGGC CAGGCAGTGGATCAGCCTCCTTGTTATCCGACCTGGGCTTTCGGAGGCTCACCCAACTCGTCGGACATATACGAC GCGGCTCACAAAACACCCGCCGCACCGCAGTGCGAGTATCCAGACGTGGGCTGTGGGTGTCGCAAACCTGGAATA GCGACAGGGAACCCCGGACCCGCATTCCCCATCTACTACACGTTTAAGCAGTGCAATGAGACCGAAGTTCGGGTG GTGTACAACCTGTTCTATGAGAAGGACGGAGCCGAGGTGCTGGACCTGATTGACACGGGCCATGACTATGACTGG GAACGAGTCATCATCATCCATTCAAGAAATGCGAACAACACCTGGCAGCCCTCTCGTGCACTCCTTTCAGCCCAT AGTGGCTACCATAATCTCGCCTGGAGCAGCATTCATAGCACTCTGACCACAGAGCAAATCAACGCCGGAGATGCT CGAAAGCCCGATGGAGTCAAGAACAATGACCACCCAAAGGTGTATGTGTCGTGGTCGAAGCATGCACATTTCGAT ACCATAGATACTACCTGGCTCGATCCGCTGAGCCAGTCACTCGATAATGCGTTTCGCAGCAACGACTGGTGGCAC TTTGTCGACCCGAAGTACTATATCCGATCGGATAACTCGACCGCAGCTGGAAAAGCCTTCAACAGTACGGATTGG GGATCAGCGACGAGTAACCCGCCATATGTGCAGGAGAGTGTATGCTCTGTGCCGTAA |
| Gene | >Ani_SJS100_1|g1331.t1 ATGTGGCTAAAAAGCAAATACATCGTGGTGGCTCTTCTTGCCGCACCGGCGGCAGCCGTCACACCGATATCCAAC GATGAAATGACCAACTTCCTCAGCCAAGGCGCTGTAGAGCTCGCTACCCGGTATGCGCCTCTCTGGTTCTTTGGC CAGGCAGTGGATCAGCCTCCTTGTTATCCGACCTGGGCTTTCGGAGGCTCACCCAACTCGTCGGACATATACGAC GCGGCTCACAAAACACCCGCCGCACCGCAGTGCGAGTATCCAGACGTGGGCTGTGGGTGTCGCAAACCTGGAATA GCGACAGGGAACCCCGGACCCGCATTCCCCATCTACTACACGTTTAAGCAGTGCAATGAGACCGAAGTTCGGGTG GTGTACAACCTGTTCTATGAGAAGGACGGAGCCGAGGTGCTGGACCTGATTGACACGGGCCATGACTAGTAAGAT CACCGCGTAAACCAAATCAACATCTTTGAACAGACAGACTGATGCGCTCGACCAGTGACTGGGAACGAGTCATCA TCATCCATTCAAGAAATGCGAACAACACCTGGCAGCCCTCTCGTGCACTCCTTTCAGCCCATAGTGGCTACCATA ATCTCGCCTGGAGCAGCATTCATAGCACTCTGACCACAGAGCAAATCAACGCCGGAGATGCTCGAAAGCCCGATG GAGTCAAGAACAATGACCACCCAAAGGTGTATGTGTCGTGGTCGAAGCATGCACATTTCGATACCATAGATACTA CCTGGCTCGATCCGCTGAGCCAGTCACTCGATAATGCGTTTCGCAGCAACGACTGGTGGCACTTTGTCGACCCGA AGTACTATGTACGTATTAGCGTCCCCATTGTGATGTATAGTAGCTAACGCCCAGCGAGATCCGATCGGATAACTC GACCGCAGCTGGAAAAGCCTTCAACAGTACGGATTGGGGATCAGCGACGAGTAACCCGCCATATGTGCAGGAGAG TGTATGCTCTGTGCCGTAA |