Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g132.t1
Gene name
Locationscaffold_001:442522..443433
Strand-
Gene length (bp)911
Transcript length (bp)705
Coding sequence length (bp)705
Protein length (aa) 235

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18265 Nas2_N Nas2 N_terminal domain 5.3E-30 30 107
PF17820 PDZ_6 PDZ domain 7.3E-12 145 200
PF13180 PDZ_2 PDZ domain 4.6E-08 143 209
PF00595 PDZ PDZ domain 2.9E-06 126 198

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g132.t1
MGSNIHAPTVASGPTSGGAPPRDLSKLGMVDLMQEKERIEEELSALSSVLGSHGVNMNTSLTTFDGFPRDDIDVA
QIRTTRARIIRLRNDHKDVMSHLEKGIHNHFANLQRAQTAAQSGGLGSQPSVTGNNTSGTGASGLPFAKVNSVVP
GSPADQAGLRVGDTVREFGSANWLNHERLSRVAEIVQQSEGRTVAVKVVRKDPSSSSSIDLSLQLVPRRDWGGRG
LLGCHLVPL*
Coding >Ani_SJS100_1|g132.t1
ATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCC
AAGCTCGGCATGGTCGATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCGTCCTT
GGCTCGCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCC
CAAATACGCACCACTCGAGCCCGGATTATTCGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAGAAA
GGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGTCGGGTGGCTTGGGGTCGCAACCT
AGTGTGACTGGGAATAATACCTCCGGCACTGGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCT
GGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCGGAAGTGCCAACTGGCTCAAC
CATGAACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCAGAGTGAAGGGCGCACTGTGGCGGTCAAAGTCGTGAGG
AAAGATCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGC
CTGTTGGGCTGTCATCTCGTGCCGCTGTAG
Transcript >Ani_SJS100_1|g132.t1
ATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCC
AAGCTCGGCATGGTCGATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCGTCCTT
GGCTCGCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCC
CAAATACGCACCACTCGAGCCCGGATTATTCGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAGAAA
GGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGTCGGGTGGCTTGGGGTCGCAACCT
AGTGTGACTGGGAATAATACCTCCGGCACTGGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCT
GGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCGGAAGTGCCAACTGGCTCAAC
CATGAACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCAGAGTGAAGGGCGCACTGTGGCGGTCAAAGTCGTGAGG
AAAGATCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGC
CTGTTGGGCTGTCATCTCGTGCCGCTGTAG
Gene >Ani_SJS100_1|g132.t1
ATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCC
AAGCTCGGCATGGTCGATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCGTCCTT
GGCTCGGTGAGTTGAACTGATATTGGATAAGCCTTGCCACTCTGTGAGATGTCGACTGACGATGCTTTCTGTCTA
GCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAAG
TGAGTCACTACTTTTTGCCTCCGCAGTGCGTCTGCTAAACAGTAGTTAGTACGCACCACTCGAGCCCGGATTATT
CGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAG
CGGGCGCAAACTGCCGCACAGTCGGGTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATACCTCCGGCACT
GGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGG
GTTGGAGATACCGTTCGGGAGTTCGGAAGTGCCAACTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATA
GTGCAGCAGAGTGAAGGGGTAAGTAGGCGATGTGCTTCCAACCTCTTAGTCGTCTAGTCCAGGGACATGCACTCG
GGAGAACGCTCTAGGCTAACGTCTTCTAGCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCA
GCAGCATCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCG
TGCCGCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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