© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1316.t1 |
| Gene name | |
| Location | scaffold_004:738337..739690 |
| Strand | + |
| Gene length (bp) | 1353 |
| Transcript length (bp) | 1170 |
| Coding sequence length (bp) | 1170 |
| Protein length (aa) | 390 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 31 | 53 | 22 |
| 2 | 66 | 88 | 22 |
| 3 | 119 | 141 | 22 |
| 4 | 154 | 176 | 22 |
| 5 | 196 | 218 | 22 |
| 6 | 230 | 252 | 22 |
| 7 | 267 | 289 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1316.t1 MDSAALNITSSQASQTPPAIGDIGRITQRQYGIAVGVFFALASLSFFGRIFIRLFTRRRLYLDDAFLSFAFTTLL IGTVLGFLRAYTIYFQMAALEGNVGAVLFLASHLNEHAKDYGFNIAFIVLLWTTVFAVKWCYLAFFQPLLVGMSR WFIIYYRFTVGLSVISWILSAFVAPIVPCPYTGMKAIFPNSTVLAMIWLPPILDAVTDLMIISIPIRLLYKVQLR TLTKLGLGCFLCLSIFMCTCSIIRTAGTWYHGLLDYPWQVFWLHLEGCIGVTMGSITVYRSTLIGSSEVSTAFKR YFTRIKDAVLGSSSGTAQAPPTEENKTRTRQFGLPSIPQATITGLRTWFGFSRRDPAASNDASGITSFNSDIDYH TLLKAPKAAASHPQ* |
| Coding | >Ani_SJS100_1|g1316.t1 ATGGACAGCGCAGCGCTGAATATCACTTCCAGTCAAGCTTCTCAGACCCCGCCGGCCATAGGTGATATCGGTCGG ATTACCCAGCGGCAATATGGCATAGCAGTTGGCGTTTTCTTTGCGTTAGCATCACTGTCGTTCTTTGGTCGCATC TTCATCCGACTCTTCACTCGACGACGCCTCTATTTGGACGATGCTTTCCTTAGCTTTGCTTTTACCACACTGTTG ATAGGAACAGTACTGGGCTTTCTCCGCGCATACACCATCTACTTTCAGATGGCAGCATTGGAAGGAAATGTTGGC GCAGTCCTCTTTCTCGCCTCGCATTTAAATGAACATGCCAAAGACTATGGCTTCAACATCGCCTTTATAGTTCTT CTCTGGACCACAGTTTTTGCTGTCAAATGGTGCTACCTGGCATTCTTCCAGCCCCTCCTGGTGGGAATGTCACGC TGGTTTATTATTTATTACCGTTTCACTGTCGGGCTGTCTGTTATCTCGTGGATCTTGAGCGCCTTCGTCGCTCCG ATCGTTCCTTGCCCGTACACAGGAATGAAGGCAATTTTCCCAAACAGCACGGTTCTTGCAATGATTTGGCTTCCA CCAATTCTGGATGCGGTCACTGATCTGATGATAATTAGTATTCCAATCCGGTTGCTCTATAAGGTCCAATTGCGA ACCTTGACAAAACTGGGACTTGGATGCTTCCTGTGTCTCTCGATCTTCATGTGCACGTGCTCCATCATTCGCACT GCAGGCACATGGTATCACGGGCTTCTCGACTACCCATGGCAGGTATTCTGGCTGCATTTGGAGGGATGTATCGGA GTCACCATGGGATCTATCACCGTCTACCGGTCCACTTTGATCGGATCAAGTGAGGTTTCAACCGCATTCAAGAGA TACTTTACCCGGATCAAGGACGCGGTTTTGGGGTCGTCAAGTGGCACAGCACAAGCGCCACCAACAGAGGAAAAC AAGACTCGGACACGTCAATTTGGACTGCCGTCCATTCCACAAGCAACTATTACGGGGTTGCGCACGTGGTTCGGT TTCTCCAGGAGGGATCCTGCCGCTTCCAACGATGCCTCCGGGATCACTAGCTTTAACAGCGATATCGATTACCAT ACTTTGTTGAAAGCCCCCAAGGCAGCGGCGAGTCACCCTCAATGA |
| Transcript | >Ani_SJS100_1|g1316.t1 ATGGACAGCGCAGCGCTGAATATCACTTCCAGTCAAGCTTCTCAGACCCCGCCGGCCATAGGTGATATCGGTCGG ATTACCCAGCGGCAATATGGCATAGCAGTTGGCGTTTTCTTTGCGTTAGCATCACTGTCGTTCTTTGGTCGCATC TTCATCCGACTCTTCACTCGACGACGCCTCTATTTGGACGATGCTTTCCTTAGCTTTGCTTTTACCACACTGTTG ATAGGAACAGTACTGGGCTTTCTCCGCGCATACACCATCTACTTTCAGATGGCAGCATTGGAAGGAAATGTTGGC GCAGTCCTCTTTCTCGCCTCGCATTTAAATGAACATGCCAAAGACTATGGCTTCAACATCGCCTTTATAGTTCTT CTCTGGACCACAGTTTTTGCTGTCAAATGGTGCTACCTGGCATTCTTCCAGCCCCTCCTGGTGGGAATGTCACGC TGGTTTATTATTTATTACCGTTTCACTGTCGGGCTGTCTGTTATCTCGTGGATCTTGAGCGCCTTCGTCGCTCCG ATCGTTCCTTGCCCGTACACAGGAATGAAGGCAATTTTCCCAAACAGCACGGTTCTTGCAATGATTTGGCTTCCA CCAATTCTGGATGCGGTCACTGATCTGATGATAATTAGTATTCCAATCCGGTTGCTCTATAAGGTCCAATTGCGA ACCTTGACAAAACTGGGACTTGGATGCTTCCTGTGTCTCTCGATCTTCATGTGCACGTGCTCCATCATTCGCACT GCAGGCACATGGTATCACGGGCTTCTCGACTACCCATGGCAGGTATTCTGGCTGCATTTGGAGGGATGTATCGGA GTCACCATGGGATCTATCACCGTCTACCGGTCCACTTTGATCGGATCAAGTGAGGTTTCAACCGCATTCAAGAGA TACTTTACCCGGATCAAGGACGCGGTTTTGGGGTCGTCAAGTGGCACAGCACAAGCGCCACCAACAGAGGAAAAC AAGACTCGGACACGTCAATTTGGACTGCCGTCCATTCCACAAGCAACTATTACGGGGTTGCGCACGTGGTTCGGT TTCTCCAGGAGGGATCCTGCCGCTTCCAACGATGCCTCCGGGATCACTAGCTTTAACAGCGATATCGATTACCAT ACTTTGTTGAAAGCCCCCAAGGCAGCGGCGAGTCACCCTCAATGA |
| Gene | >Ani_SJS100_1|g1316.t1 ATGGACAGCGCAGCGCTGAATATCACTTCCAGTCAAGCTTCTCAGACCCCGCCGGCCATAGGTGATATCGGTCGG ATTACCCAGCGGCAATATGGCGTAAGGCTAGTCCAAGCATAATTATCCGAAAGTATAACTCTAACGAAAGATCTA TGATTACCAGATAGCAGTTGGCGTTTTCTTTGCGTTAGCATCACTGTCGTTCTTTGGTCGCATCTTCATCCGACT CTTCACTCGACGACGCCTCTATTTGGACGATGCTTTCCTTAGCTTTGCTTTTACCACACTGTTGATAGGAACAGT ACTGGGCTTTCTCCGCGCATACACCATCTACTTTCAGATGGCAGCATTGGAAGGAAATGTTGGCGCAGTCCTCTT TCTCGCCTCGCATTTAAATGAACATGCCAAAGACTATGGCTTCAACATCGCCTTTATAGTTCTTCTCTGGACCAC AGTTTTTGCTGTCAAATGGTGCTACCTGGCATTCTTCCAGCCCCTCCTGGTGGGAATGTCACGCTGGTTTATTAT TTATTACCGTTTCACTGTCGGGCTGTCTGTTATCTCGTGGATCTTGAGCGCCTTCGTCGCTCCGATCGTTCCTTG CCCGTACACAGGAATGAAGGCAATTTGTAAGCACCTCTGGTCAGCGATAGGCTCCTCCACTAACTATGTAAAGCC AAATGCTTTCCCACTTTACCAGTCCCAAACAGCACGGTTCTTGCAATGATTTGGCTTCCACCAATTCTGGATGCG GTCACTGATCTGATGAGTATGTCACCTAACCAAACAAAGACTAGCTATAACTGACCTTGCCCAGTAATTAGTATT CCAATCCGGTTGCTCTATAAGGTCCAATTGCGAACCTTGACAAAACTGGGACTTGGATGCTTCCTGTGTCTCTCG ATCTTCATGTGCACGTGCTCCATCATTCGCACTGCAGGCACATGGTATCACGGGCTTCTCGACTACCCATGGCAG GTATTCTGGCTGCATTTGGAGGGATGTATCGGAGTCACCATGGGATCTATCACCGTCTACCGGTCCACTTTGATC GGATCAAGTGAGGTTTCAACCGCATTCAAGAGATACTTTACCCGGATCAAGGACGCGGTTTTGGGGTCGTCAAGT GGCACAGCACAAGCGCCACCAACAGAGGAAAACAAGACTCGGACACGTCAATTTGGACTGCCGTCCATTCCACAA GCAACTATTACGGGGTTGCGCACGTGGTTCGGTTTCTCCAGGAGGGATCCTGCCGCTTCCAACGATGCCTCCGGG ATCACTAGCTTTAACAGCGATATCGATTACCATACTTTGTTGAAAGCCCCCAAGGCAGCGGCGAGTCACCCTCAA TGA |