Protein ID | Ani_SJS100_1|g1310.t1 |
Gene name | |
Location | scaffold_004:718709..719993 |
Strand | - |
Gene length (bp) | 1284 |
Transcript length (bp) | 1062 |
Coding sequence length (bp) | 1062 |
Protein length (aa) | 354 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 18 | 40 | 22 |
2 | 53 | 75 | 22 |
3 | 97 | 119 | 22 |
4 | 132 | 154 | 22 |
5 | 179 | 201 | 22 |
6 | 214 | 236 | 22 |
7 | 251 | 273 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 10108 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1310.t1 MVSQAVTGLSEHSFHLNVTFVSVTGVMTLLSTCLVALRFISRSLTLSIKLDDWFCLLALIFSYGLLCTTALVTTV GHAGIHITQYKDPLVLERYFQITLADMVIYNVSVGLTKISILLFYRRIFSINKSFLFCNWVVTGLSSGACIAAVF GLIFSSDPVDAQWKFWEPSTTIHNKSFWIAMGAVNILLDVTILILPQPVVWRLKQTRRCRIMLSLVFSLGGFVCV TSIVRLVYMATIDVTDLTYTFTVSGIWTTVETNMSIICACLPMIPSLFQHIRESRSTKGASTGWCGITRLRPFHS WKSLSGILGSVRYHAVGSKQELYNDVEAASPKRASNYWGDVAQVHAYTKLRGS* |
Coding | >Ani_SJS100_1|g1310.t1 ATGGTGTCTCAAGCAGTAACCGGTCTTTCTGAGCATTCTTTTCATCTCAATGTTACCTTTGTCTCGGTGACCGGG GTTATGACCTTACTATCGACATGCTTGGTGGCTCTGCGTTTCATCTCACGCTCTCTTACGCTCTCCATTAAGTTG GATGACTGGTTCTGCCTTCTTGCTCTGATCTTTTCCTATGGGCTCCTATGCACCACCGCTCTTGTCACAACCGTG GGGCATGCGGGCATCCACATCACACAGTACAAGGACCCCCTTGTGCTAGAAAGATACTTCCAGATCACATTAGCC GATATGGTAATCTACAACGTCAGTGTTGGGTTAACCAAAATCTCAATTTTGCTGTTCTATCGACGAATTTTCTCC ATCAACAAGTCTTTCCTATTTTGCAACTGGGTGGTCACCGGCCTCTCCTCAGGGGCCTGTATAGCTGCAGTCTTT GGGCTCATCTTCTCCTCCGACCCTGTAGATGCACAGTGGAAATTCTGGGAGCCCAGCACGACAATCCATAACAAG AGCTTCTGGATTGCTATGGGTGCAGTCAACATCCTTCTTGATGTAACTATTCTGATACTGCCACAACCGGTGGTC TGGCGGTTGAAGCAGACACGCCGGTGTCGCATTATGCTTTCGCTAGTCTTCAGTTTGGGTGGCTTCGTCTGCGTG ACCAGTATTGTACGGCTGGTGTATATGGCCACGATTGATGTAACCGATCTAACATACACCTTCACCGTCTCCGGC ATCTGGACCACGGTCGAAACAAACATGAGCATTATTTGTGCCTGTCTCCCGATGATTCCAAGCTTGTTCCAGCAC ATCCGTGAATCTCGATCGACCAAGGGGGCGAGCACAGGCTGGTGTGGCATTACACGCCTCCGCCCCTTTCACAGT TGGAAGTCCCTCTCTGGTATTCTTGGCTCAGTTCGATACCACGCAGTCGGCTCAAAACAGGAACTCTACAATGAC GTCGAAGCGGCAAGCCCCAAGAGGGCTAGCAATTATTGGGGTGATGTGGCCCAAGTTCATGCCTACACTAAACTG CGGGGGAGTTAG |
Transcript | >Ani_SJS100_1|g1310.t1 ATGGTGTCTCAAGCAGTAACCGGTCTTTCTGAGCATTCTTTTCATCTCAATGTTACCTTTGTCTCGGTGACCGGG GTTATGACCTTACTATCGACATGCTTGGTGGCTCTGCGTTTCATCTCACGCTCTCTTACGCTCTCCATTAAGTTG GATGACTGGTTCTGCCTTCTTGCTCTGATCTTTTCCTATGGGCTCCTATGCACCACCGCTCTTGTCACAACCGTG GGGCATGCGGGCATCCACATCACACAGTACAAGGACCCCCTTGTGCTAGAAAGATACTTCCAGATCACATTAGCC GATATGGTAATCTACAACGTCAGTGTTGGGTTAACCAAAATCTCAATTTTGCTGTTCTATCGACGAATTTTCTCC ATCAACAAGTCTTTCCTATTTTGCAACTGGGTGGTCACCGGCCTCTCCTCAGGGGCCTGTATAGCTGCAGTCTTT GGGCTCATCTTCTCCTCCGACCCTGTAGATGCACAGTGGAAATTCTGGGAGCCCAGCACGACAATCCATAACAAG AGCTTCTGGATTGCTATGGGTGCAGTCAACATCCTTCTTGATGTAACTATTCTGATACTGCCACAACCGGTGGTC TGGCGGTTGAAGCAGACACGCCGGTGTCGCATTATGCTTTCGCTAGTCTTCAGTTTGGGTGGCTTCGTCTGCGTG ACCAGTATTGTACGGCTGGTGTATATGGCCACGATTGATGTAACCGATCTAACATACACCTTCACCGTCTCCGGC ATCTGGACCACGGTCGAAACAAACATGAGCATTATTTGTGCCTGTCTCCCGATGATTCCAAGCTTGTTCCAGCAC ATCCGTGAATCTCGATCGACCAAGGGGGCGAGCACAGGCTGGTGTGGCATTACACGCCTCCGCCCCTTTCACAGT TGGAAGTCCCTCTCTGGTATTCTTGGCTCAGTTCGATACCACGCAGTCGGCTCAAAACAGGAACTCTACAATGAC GTCGAAGCGGCAAGCCCCAAGAGGGCTAGCAATTATTGGGGTGATGTGGCCCAAGTTCATGCCTACACTAAACTG CGGGGGAGTTAG |
Gene | >Ani_SJS100_1|g1310.t1 ATGGTGTCTCAAGCAGTAACCGGTCTTTCTGAGCATTCTTTTCATCTCAATGTTACCTTTGTCTCGGTGACCGGG GTTATGACCTTACTATCGACATGCTTGGTGGCTCTGCGTTTCATCTCACGCTCTCTTACGCTCTCCATTAAGTTG GATGACTGGTTCTGCCTTCTTGCTCTGATCTTTTCCTATGGGCTCCTATGCACCACCGCTCTTGTCACAACCGTG GGGCATGCGGGCATCCACATCACACAGTACAAGGACCCCCTTGTGCTAGAAAGATACTTCCAGGTACGCACGTAA CGCATGATAGAGAAATTATTCTTTCACTTCCCTTGAGTTTGTATATCGAGGAATGTATCATCAGCTAAGATTTGG TAATTCTTTGGTTCAGATCACATTAGCCGATATGGTAATCTACAACGTCAGTGTTGGGTTAACCAAAATCTCAAT TTTGCTGTTCTATCGACGAATTTTCTCCATCAACAAGTCTTTCCTATTTTGCAACTGGGTGGTCACCGGCCTCTC CTCAGGGGCCTGTATAGCTGCAGTCTTTGGGCTCATCTTCTCCTCCGACCCTGTAGATGCACAGTGGAAATTCTG GGAGCCCAGCACGACAATCCATAACAAGAGCTTCTGGATTGCTATGGGTGCAGTCAACATCCTTCTTGATGTAAC TATTCTGATACTGCCACAACCGGTGGTCTGGCGGTTGAAGCAGACACGCCGGTGTCGCATTATGCTTTCGCTAGT CTTCAGTTTGGGTGGCTTGTGAGTTGGTCGATCAATACACCTATTCCACAAGACTAATAATAGCTCCCCCTCAGC GTCTGCGTGACCAGTATTGTACGGCTGGTGTATATGGCCACGATTGATGTAACCGATCTAACATGTACGTGCTCC CCCTCGTTCTTTGGAAGACCATCCACGCTAACCACACCTCTTTTCCGTCAAGACACCTTCACCGTCTCCGGCATC TGGACCACGGTCGAAACAAACATGAGCATTATTTGTGCCTGTCTCCCGATGATTCCAAGCTTGTTCCAGCACATC CGTGAATCTCGATCGACCAAGGGGGCGAGCACAGGCTGGTGTGGCATTACACGCCTCCGCCCCTTTCACAGTTGG AAGTCCCTCTCTGGTATTCTTGGCTCAGTTCGATACCACGCAGTCGGCTCAAAACAGGAACTCTACAATGACGTC GAAGCGGCAAGCCCCAAGAGGGCTAGCAATTATTGGGGTGATGTGGCCCAAGTTCATGCCTACACTAAACTGCGG GGGAGTTAG |