Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1302.t1
Gene name
Locationscaffold_004:681670..682850
Strand-
Gene length (bp)1180
Transcript length (bp)1119
Coding sequence length (bp)1119
Protein length (aa) 373

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00291 PALP Pyridoxal-phosphate dependent enzyme 5.4E-66 39 337

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1302.t1
MFRQSIRRFGTTALRAAEASTTSYNVRVSKAQGFTNGLTEAIGNTPLIRLKKLSEETGCNILGKAEFQNPGGSVK
DRAALFVVEDAERKGLLKPGGTVVEGTAGNTGIGLAHVCRSKGYKLVIYMPNTQSQGKIDLLRLLGAEVYPVPAV
AFDNPQNYNHQARRHAESLDNAVWTNQFDNTANRQAHIETTGPEIWAQTNGQIDAFTCATGTGGTLAGITRYLKT
VSDGKVKSFLADPPGSVLHSYIQSGGNLVERTGSSITEGIGQGRVTDNLQPDIGLLDGSLNIPDEKSIEMVYRCL
DEEGLYLGASSALNVVAAQEVAKKLGRGNTVVTILCDGAYRYADRLFSNTWLQSKGLRGAVPKHLERYVVLP*
Coding >Ani_SJS100_1|g1302.t1
ATGTTTCGTCAAAGTATCCGCCGGTTTGGCACAACGGCCCTCCGCGCTGCGGAGGCGTCAACAACTTCCTACAAT
GTCCGGGTGTCCAAAGCCCAAGGCTTCACCAACGGCCTTACGGAAGCAATTGGCAACACCCCCCTCATCCGTCTG
AAGAAGCTCTCCGAAGAAACCGGCTGCAACATTCTCGGCAAAGCCGAGTTCCAGAATCCCGGAGGCAGCGTCAAG
GACCGCGCGGCTCTCTTCGTCGTTGAGGATGCGGAGAGAAAGGGACTCCTGAAGCCCGGCGGTACGGTGGTAGAA
GGCACGGCAGGAAACACCGGAATCGGACTCGCCCACGTCTGCCGCTCCAAGGGCTACAAGTTGGTCATCTACATG
CCGAACACCCAATCGCAGGGCAAGATCGACTTGTTGCGTCTCCTCGGTGCCGAGGTCTACCCCGTCCCCGCCGTC
GCATTCGACAACCCGCAGAACTACAACCACCAGGCTCGTCGGCACGCCGAGTCCTTGGACAACGCCGTCTGGACG
AACCAGTTCGACAACACCGCCAACCGCCAGGCTCATATCGAGACGACTGGTCCGGAGATCTGGGCGCAGACGAAC
GGTCAGATTGACGCTTTTACTTGTGCTACGGGTACCGGTGGTACTTTGGCTGGTATCACGCGCTACTTGAAGACT
GTCAGTGATGGAAAGGTTAAGAGTTTCCTTGCCGATCCTCCGGGCAGTGTGCTGCACAGCTATATCCAGAGTGGC
GGGAACTTGGTTGAGCGCACCGGTAGCAGTATCACTGAGGGTATTGGCCAGGGCCGTGTCACGGATAACCTGCAG
CCGGATATTGGTCTGCTGGACGGATCGCTTAACATCCCTGACGAGAAGTCGATCGAGATGGTCTACCGCTGCTTG
GATGAGGAGGGTCTGTACCTCGGTGCTAGCTCCGCTTTGAATGTGGTGGCCGCGCAGGAAGTGGCGAAGAAGCTG
GGCAGGGGTAACACGGTCGTTACTATCTTGTGTGATGGTGCCTACCGCTATGCGGACCGGCTGTTCTCCAACACG
TGGCTGCAGAGTAAGGGACTGCGTGGCGCGGTTCCGAAGCACTTGGAGCGCTATGTTGTGCTTCCTTAG
Transcript >Ani_SJS100_1|g1302.t1
ATGTTTCGTCAAAGTATCCGCCGGTTTGGCACAACGGCCCTCCGCGCTGCGGAGGCGTCAACAACTTCCTACAAT
GTCCGGGTGTCCAAAGCCCAAGGCTTCACCAACGGCCTTACGGAAGCAATTGGCAACACCCCCCTCATCCGTCTG
AAGAAGCTCTCCGAAGAAACCGGCTGCAACATTCTCGGCAAAGCCGAGTTCCAGAATCCCGGAGGCAGCGTCAAG
GACCGCGCGGCTCTCTTCGTCGTTGAGGATGCGGAGAGAAAGGGACTCCTGAAGCCCGGCGGTACGGTGGTAGAA
GGCACGGCAGGAAACACCGGAATCGGACTCGCCCACGTCTGCCGCTCCAAGGGCTACAAGTTGGTCATCTACATG
CCGAACACCCAATCGCAGGGCAAGATCGACTTGTTGCGTCTCCTCGGTGCCGAGGTCTACCCCGTCCCCGCCGTC
GCATTCGACAACCCGCAGAACTACAACCACCAGGCTCGTCGGCACGCCGAGTCCTTGGACAACGCCGTCTGGACG
AACCAGTTCGACAACACCGCCAACCGCCAGGCTCATATCGAGACGACTGGTCCGGAGATCTGGGCGCAGACGAAC
GGTCAGATTGACGCTTTTACTTGTGCTACGGGTACCGGTGGTACTTTGGCTGGTATCACGCGCTACTTGAAGACT
GTCAGTGATGGAAAGGTTAAGAGTTTCCTTGCCGATCCTCCGGGCAGTGTGCTGCACAGCTATATCCAGAGTGGC
GGGAACTTGGTTGAGCGCACCGGTAGCAGTATCACTGAGGGTATTGGCCAGGGCCGTGTCACGGATAACCTGCAG
CCGGATATTGGTCTGCTGGACGGATCGCTTAACATCCCTGACGAGAAGTCGATCGAGATGGTCTACCGCTGCTTG
GATGAGGAGGGTCTGTACCTCGGTGCTAGCTCCGCTTTGAATGTGGTGGCCGCGCAGGAAGTGGCGAAGAAGCTG
GGCAGGGGTAACACGGTCGTTACTATCTTGTGTGATGGTGCCTACCGCTATGCGGACCGGCTGTTCTCCAACACG
TGGCTGCAGAGTAAGGGACTGCGTGGCGCGGTTCCGAAGCACTTGGAGCGCTATGTTGTGCTTCCTTAG
Gene >Ani_SJS100_1|g1302.t1
ATGTTTCGTCAAAGTATCCGCCGGTTTGGCACAACGGCCCTCCGCGCTGCGGAGGCGTCAACAACTTCCTACAAT
GTCCGGGTGTCCAAAGCCCAAGGCTTCACCAACGGCCTTACGGAAGGTATGCACCCATACTTGTCTACCCACCGG
CAAATCAATCGCATAACTAACCCCCTCACCAGCAATTGGCAACACCCCCCTCATCCGTCTGAAGAAGCTCTCCGA
AGAAACCGGCTGCAACATTCTCGGCAAAGCCGAGTTCCAGAATCCCGGAGGCAGCGTCAAGGACCGCGCGGCTCT
CTTCGTCGTTGAGGATGCGGAGAGAAAGGGACTCCTGAAGCCCGGCGGTACGGTGGTAGAAGGCACGGCAGGAAA
CACCGGAATCGGACTCGCCCACGTCTGCCGCTCCAAGGGCTACAAGTTGGTCATCTACATGCCGAACACCCAATC
GCAGGGCAAGATCGACTTGTTGCGTCTCCTCGGTGCCGAGGTCTACCCCGTCCCCGCCGTCGCATTCGACAACCC
GCAGAACTACAACCACCAGGCTCGTCGGCACGCCGAGTCCTTGGACAACGCCGTCTGGACGAACCAGTTCGACAA
CACCGCCAACCGCCAGGCTCATATCGAGACGACTGGTCCGGAGATCTGGGCGCAGACGAACGGTCAGATTGACGC
TTTTACTTGTGCTACGGGTACCGGTGGTACTTTGGCTGGTATCACGCGCTACTTGAAGACTGTCAGTGATGGAAA
GGTTAAGAGTTTCCTTGCCGATCCTCCGGGCAGTGTGCTGCACAGCTATATCCAGAGTGGCGGGAACTTGGTTGA
GCGCACCGGTAGCAGTATCACTGAGGGTATTGGCCAGGGCCGTGTCACGGATAACCTGCAGCCGGATATTGGTCT
GCTGGACGGATCGCTTAACATCCCTGACGAGAAGTCGATCGAGATGGTCTACCGCTGCTTGGATGAGGAGGGTCT
GTACCTCGGTGCTAGCTCCGCTTTGAATGTGGTGGCCGCGCAGGAAGTGGCGAAGAAGCTGGGCAGGGGTAACAC
GGTCGTTACTATCTTGTGTGATGGTGCCTACCGCTATGCGGACCGGCTGTTCTCCAACACGTGGCTGCAGAGTAA
GGGACTGCGTGGCGCGGTTCCGAAGCACTTGGAGCGCTATGTTGTGCTTCCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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