Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1294.t1
Gene name
Locationscaffold_004:662715..664193
Strand-
Gene length (bp)1478
Transcript length (bp)1125
Coding sequence length (bp)1125
Protein length (aa) 375

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04321 RmlD_sub_bind RmlD substrate binding domain 9.2E-57 64 357
PF01370 Epimerase NAD dependent epimerase/dehydratase family 5.8E-21 65 248
PF07993 NAD_binding_4 Male sterility protein 3.5E-08 110 231
PF02719 Polysacc_synt_2 Polysaccharide biosynthesis protein 3.3E-07 105 173
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 1.3E-08 102 244
PF16363 GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 9.0E-08 101 218

GO

GO Term Description Terminal node
GO:0006694 steroid biosynthetic process Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Yes
GO:1901576 organic substance biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0044238 primary metabolic process No
GO:0008202 steroid metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0006629 lipid metabolic process No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0009058 biosynthetic process No
GO:0016229 steroid dehydrogenase activity No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0008150 biological_process No
GO:1901362 organic cyclic compound biosynthetic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup1592
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g1269.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g9283.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g2305.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g9194.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g8545.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g2195.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g4099.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g2793.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g2125.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g308.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g7431.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g6681.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g104.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g935.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g3716.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g4760.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g1580.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g4797.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g5382.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g1294.t1 (this protein)
Aspergillus niger CBS 147371 Ani_SJS27_1|g40.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g8049.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g8498.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g334.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1294.t1
MQPHKSEVHSSPSSVAHRDRPSSPTHSSEKKLDKTSLLRVIIPFLLFSSTMSSTETQFGNMSTTVLVTGATGLLG
RQVFNTFKHSGCLVVGQGYSRAIPPTIQKADLEKEEDIKNLLNEAKPQIVIHCAANRSPDLCDQNPDQARRVNVD
ATRTLAEETARRGALLVYISTDYVFPGKEGEAPYEADAQTNPPNLYGQFKRDGEVAVLEATKDTGLGIVLRVPVL
YGTAKENSESAVNTLVDAVYKAQDESAGVKMDDWALRYPTNTEDVARVCRDIVIKYVKERQRIQELPKILQFSSE
DRMTKYEICEKLADVLGLSLVGMVRNKQGNDPNASVQRPYDTHLSTKALKELGIDLRTVDFVSWWRKHLGAYKH*
Coding >Ani_SJS100_1|g1294.t1
ATGCAGCCTCACAAATCAGAAGTACATTCATCTCCAAGTTCAGTTGCTCACCGTGACAGACCCTCATCTCCCACC
CACTCTTCCGAGAAGAAATTAGACAAAACATCTCTTCTGCGCGTCATTATCCCTTTTCTTTTGTTCTCTTCCACC
ATGTCCTCTACTGAAACGCAATTCGGAAACATGTCGACTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGT
CGACAGGTATTCAATACCTTCAAGCACTCCGGCTGTCTGGTCGTTGGTCAAGGCTATTCTAGAGCCATACCTCCC
ACGATACAGAAGGCCGATTTGGAAAAGGAGGAGGACATCAAGAATTTGTTGAACGAAGCGAAACCTCAGATAGTC
ATCCATTGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGAC
GCCACCCGCACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGTTTACATTTCGACCGACTATGTTTTC
CCTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGACGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAG
CGGGATGGCGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGGGATCGTGCTGCGGGTGCCCGTGTTG
TATGGGACTGCCAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAGGACGAG
AGTGCGGGCGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGT
GACATTGTGATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAGTTCTCGTCGGAG
GATCGGATGACCAAGTACGAGATCTGTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTGCGC
AACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAG
GAGCTCGGAATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGGCGGAAACACTTGGGAGCGTACAAGCATTAA
Transcript >Ani_SJS100_1|g1294.t1
ATGCAGCCTCACAAATCAGAAGTACATTCATCTCCAAGTTCAGTTGCTCACCGTGACAGACCCTCATCTCCCACC
CACTCTTCCGAGAAGAAATTAGACAAAACATCTCTTCTGCGCGTCATTATCCCTTTTCTTTTGTTCTCTTCCACC
ATGTCCTCTACTGAAACGCAATTCGGAAACATGTCGACTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGT
CGACAGGTATTCAATACCTTCAAGCACTCCGGCTGTCTGGTCGTTGGTCAAGGCTATTCTAGAGCCATACCTCCC
ACGATACAGAAGGCCGATTTGGAAAAGGAGGAGGACATCAAGAATTTGTTGAACGAAGCGAAACCTCAGATAGTC
ATCCATTGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGAC
GCCACCCGCACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGTTTACATTTCGACCGACTATGTTTTC
CCTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGACGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAG
CGGGATGGCGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGGGATCGTGCTGCGGGTGCCCGTGTTG
TATGGGACTGCCAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAGGACGAG
AGTGCGGGCGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGT
GACATTGTGATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAGTTCTCGTCGGAG
GATCGGATGACCAAGTACGAGATCTGTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTGCGC
AACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAG
GAGCTCGGAATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGGCGGAAACACTTGGGAGCGTACAAGCATTAA
Gene >Ani_SJS100_1|g1294.t1
ATGCAGCCTCACAAATCAGAAGTACATTCATCTCCAAGTTCAGTTGGTGATCAATTGTGCCTGGCCCATTACGCT
GTGTCTCGACCCATCCATCCCGATCAGCTCACCGTGACAGACCCTCATCTCCCACCCACTCTTCCGAGAAGAAAT
TAGACAGTAAGAGACCAACCCGTCGTTACGTCATGAAGATGCCCCGCAGTTGACCAGCTACCAGAAACATCTCTT
CTGCGCGTCATTATCCCTTTTCTTTTGTTCTCTTCCACCATGTCCTCTACTGAAACGCAATTCGGAAACATGTCG
ACTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGTCGACAGGTATTCAATACCTTCAAGCACTCCGGCTGT
CTGGTCGTTGGTCAAGGCTATTCTAGAGCCATACCTCCCACGATACAGAAGGCCGATTTGGAAAAGGAGGAGGAC
ATCAAGAATTTGTTGAACGAAGCGAAGTAAATCAATTCCCGACTACGGCTTCCGCCTGCATCTTACACTGAATAC
CCCCCCATCTCACACCCGCGTTGTACACGAATTGAATCTGACTGATGTCCGTGCCCCTGCAGACCTCAGATAGTC
ATCCATTGTACGCCACCTCCTGTTGGAAATGCAGCCAATCTGCATCGCCTTGCACGCTGACCGTTCCGCTCTAGG
TGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGACGCCACCCG
CACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGTTTACATTTCGACCGACTATGTTTTCCCTGGTAA
GGAGGGGGAGGCTCCCTACGAGGCCGACGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAGCGGGATGG
CGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGGGATCGTGCTGCGGGTGCCCGTGTTGTATGGGAC
TGCCAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAGGACGAGAGTGCGGG
CGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGTGACATTGT
GATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAGTTCTCGTCGGAGGATCGGAT
GACCAAGTACGAGATCTGTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTGCGCAACAAGCA
AGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAGGAGCTCGG
AATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGGTAAGTTGTTCTTTCCCTTATCAGGATGGTGCATAGTAG
AGAGGCTAACGCTCAGACGCAGGCGGAAACACTTGGGAGCGTACAAGCATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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