Protein ID | Ani_SJS100_1|g1294.t1 |
Gene name | |
Location | scaffold_004:662715..664193 |
Strand | - |
Gene length (bp) | 1478 |
Transcript length (bp) | 1125 |
Coding sequence length (bp) | 1125 |
Protein length (aa) | 375 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04321 | RmlD_sub_bind | RmlD substrate binding domain | 9.2E-57 | 64 | 357 |
PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 5.8E-21 | 65 | 248 |
PF07993 | NAD_binding_4 | Male sterility protein | 3.5E-08 | 110 | 231 |
PF02719 | Polysacc_synt_2 | Polysaccharide biosynthesis protein | 3.3E-07 | 105 | 173 |
PF01073 | 3Beta_HSD | 3-beta hydroxysteroid dehydrogenase/isomerase family | 1.3E-08 | 102 | 244 |
PF16363 | GDP_Man_Dehyd | GDP-mannose 4,6 dehydratase | 9.0E-08 | 101 | 218 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006694 | steroid biosynthetic process | Yes |
GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Yes |
GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | Yes |
GO:1901576 | organic substance biosynthetic process | No |
GO:1901360 | organic cyclic compound metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | No |
GO:0044238 | primary metabolic process | No |
GO:0008202 | steroid metabolic process | No |
GO:0008610 | lipid biosynthetic process | No |
GO:0003674 | molecular_function | No |
GO:0008152 | metabolic process | No |
GO:0006629 | lipid metabolic process | No |
GO:0016491 | oxidoreductase activity | No |
GO:0003824 | catalytic activity | No |
GO:0009058 | biosynthetic process | No |
GO:0016229 | steroid dehydrogenase activity | No |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | No |
GO:0008150 | biological_process | No |
GO:1901362 | organic cyclic compound biosynthetic process | No |
Orthofinder run ID | 3 |
Orthogroup | 1592 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1294.t1 MQPHKSEVHSSPSSVAHRDRPSSPTHSSEKKLDKTSLLRVIIPFLLFSSTMSSTETQFGNMSTTVLVTGATGLLG RQVFNTFKHSGCLVVGQGYSRAIPPTIQKADLEKEEDIKNLLNEAKPQIVIHCAANRSPDLCDQNPDQARRVNVD ATRTLAEETARRGALLVYISTDYVFPGKEGEAPYEADAQTNPPNLYGQFKRDGEVAVLEATKDTGLGIVLRVPVL YGTAKENSESAVNTLVDAVYKAQDESAGVKMDDWALRYPTNTEDVARVCRDIVIKYVKERQRIQELPKILQFSSE DRMTKYEICEKLADVLGLSLVGMVRNKQGNDPNASVQRPYDTHLSTKALKELGIDLRTVDFVSWWRKHLGAYKH* |
Coding | >Ani_SJS100_1|g1294.t1 ATGCAGCCTCACAAATCAGAAGTACATTCATCTCCAAGTTCAGTTGCTCACCGTGACAGACCCTCATCTCCCACC CACTCTTCCGAGAAGAAATTAGACAAAACATCTCTTCTGCGCGTCATTATCCCTTTTCTTTTGTTCTCTTCCACC ATGTCCTCTACTGAAACGCAATTCGGAAACATGTCGACTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGT CGACAGGTATTCAATACCTTCAAGCACTCCGGCTGTCTGGTCGTTGGTCAAGGCTATTCTAGAGCCATACCTCCC ACGATACAGAAGGCCGATTTGGAAAAGGAGGAGGACATCAAGAATTTGTTGAACGAAGCGAAACCTCAGATAGTC ATCCATTGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGAC GCCACCCGCACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGTTTACATTTCGACCGACTATGTTTTC CCTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGACGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAG CGGGATGGCGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGGGATCGTGCTGCGGGTGCCCGTGTTG TATGGGACTGCCAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAGGACGAG AGTGCGGGCGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGT GACATTGTGATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAGTTCTCGTCGGAG GATCGGATGACCAAGTACGAGATCTGTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTGCGC AACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAG GAGCTCGGAATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGGCGGAAACACTTGGGAGCGTACAAGCATTAA |
Transcript | >Ani_SJS100_1|g1294.t1 ATGCAGCCTCACAAATCAGAAGTACATTCATCTCCAAGTTCAGTTGCTCACCGTGACAGACCCTCATCTCCCACC CACTCTTCCGAGAAGAAATTAGACAAAACATCTCTTCTGCGCGTCATTATCCCTTTTCTTTTGTTCTCTTCCACC ATGTCCTCTACTGAAACGCAATTCGGAAACATGTCGACTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGT CGACAGGTATTCAATACCTTCAAGCACTCCGGCTGTCTGGTCGTTGGTCAAGGCTATTCTAGAGCCATACCTCCC ACGATACAGAAGGCCGATTTGGAAAAGGAGGAGGACATCAAGAATTTGTTGAACGAAGCGAAACCTCAGATAGTC ATCCATTGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGAC GCCACCCGCACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGTTTACATTTCGACCGACTATGTTTTC CCTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGACGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAG CGGGATGGCGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGGGATCGTGCTGCGGGTGCCCGTGTTG TATGGGACTGCCAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAGGACGAG AGTGCGGGCGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGT GACATTGTGATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAGTTCTCGTCGGAG GATCGGATGACCAAGTACGAGATCTGTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTGCGC AACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAG GAGCTCGGAATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGGCGGAAACACTTGGGAGCGTACAAGCATTAA |
Gene | >Ani_SJS100_1|g1294.t1 ATGCAGCCTCACAAATCAGAAGTACATTCATCTCCAAGTTCAGTTGGTGATCAATTGTGCCTGGCCCATTACGCT GTGTCTCGACCCATCCATCCCGATCAGCTCACCGTGACAGACCCTCATCTCCCACCCACTCTTCCGAGAAGAAAT TAGACAGTAAGAGACCAACCCGTCGTTACGTCATGAAGATGCCCCGCAGTTGACCAGCTACCAGAAACATCTCTT CTGCGCGTCATTATCCCTTTTCTTTTGTTCTCTTCCACCATGTCCTCTACTGAAACGCAATTCGGAAACATGTCG ACTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGTCGACAGGTATTCAATACCTTCAAGCACTCCGGCTGT CTGGTCGTTGGTCAAGGCTATTCTAGAGCCATACCTCCCACGATACAGAAGGCCGATTTGGAAAAGGAGGAGGAC ATCAAGAATTTGTTGAACGAAGCGAAGTAAATCAATTCCCGACTACGGCTTCCGCCTGCATCTTACACTGAATAC CCCCCCATCTCACACCCGCGTTGTACACGAATTGAATCTGACTGATGTCCGTGCCCCTGCAGACCTCAGATAGTC ATCCATTGTACGCCACCTCCTGTTGGAAATGCAGCCAATCTGCATCGCCTTGCACGCTGACCGTTCCGCTCTAGG TGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGACGCCACCCG CACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGTTTACATTTCGACCGACTATGTTTTCCCTGGTAA GGAGGGGGAGGCTCCCTACGAGGCCGACGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAGCGGGATGG CGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGGGATCGTGCTGCGGGTGCCCGTGTTGTATGGGAC TGCCAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAGGACGAGAGTGCGGG CGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGTGACATTGT GATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAGTTCTCGTCGGAGGATCGGAT GACCAAGTACGAGATCTGTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTGCGCAACAAGCA AGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAGGAGCTCGG AATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGGTAAGTTGTTCTTTCCCTTATCAGGATGGTGCATAGTAG AGAGGCTAACGCTCAGACGCAGGCGGAAACACTTGGGAGCGTACAAGCATTAA |