Protein ID | Ani_SJS100_1|g128.t1 |
Gene name | |
Location | scaffold_001:428729..429255 |
Strand | - |
Gene length (bp) | 526 |
Transcript length (bp) | 390 |
Coding sequence length (bp) | 390 |
Protein length (aa) | 130 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02036 | SCP2 | SCP-2 sterol transfer family | 3.1E-27 | 21 | 121 |
PF14864 | Alkyl_sulf_C | Alkyl sulfatase C-terminal | 4.3E-08 | 12 | 122 |
Orthofinder run ID | 3 |
Orthogroup | 1581 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g128.t1 MSLKNDAFPSSAAFDAINSTLQADAAERKEAINKAKAVVAFNIKNDKGKEESWYLDLKDKGVVGKGAAPEGGKAD VTLSLSDADFSALVSGKANAQRLFMGGKLKIKGNIMKATKMEPVLKKAQGKAKL* |
Coding | >Ani_SJS100_1|g128.t1 ATGTCTCTCAAGAACGACGCTTTCCCTTCTTCTGCCGCCTTCGACGCCATCAACTCGACTCTGCAGGCTGATGCT GCCGAGCGCAAAGAGGCCATCAACAAGGCTAAAGCGGTGGTCGCCTTCAACATCAAGAACGACAAGGGCAAAGAA GAGAGCTGGTATCTCGACCTCAAGGACAAGGGTGTTGTGGGCAAGGGTGCTGCTCCCGAAGGAGGAAAGGCTGAT GTGACTCTCTCTCTTTCGGATGCCGACTTCAGCGCCCTCGTAAGCGGCAAGGCCAATGCCCAGAGGCTCTTTATG GGTGGGAAGCTCAAGATCAAGGGCAACATTATGAAGGCGACCAAGATGGAGCCTGTCCTGAAGAAGGCCCAGGGC AAGGCTAAGCTATAG |
Transcript | >Ani_SJS100_1|g128.t1 ATGTCTCTCAAGAACGACGCTTTCCCTTCTTCTGCCGCCTTCGACGCCATCAACTCGACTCTGCAGGCTGATGCT GCCGAGCGCAAAGAGGCCATCAACAAGGCTAAAGCGGTGGTCGCCTTCAACATCAAGAACGACAAGGGCAAAGAA GAGAGCTGGTATCTCGACCTCAAGGACAAGGGTGTTGTGGGCAAGGGTGCTGCTCCCGAAGGAGGAAAGGCTGAT GTGACTCTCTCTCTTTCGGATGCCGACTTCAGCGCCCTCGTAAGCGGCAAGGCCAATGCCCAGAGGCTCTTTATG GGTGGGAAGCTCAAGATCAAGGGCAACATTATGAAGGCGACCAAGATGGAGCCTGTCCTGAAGAAGGCCCAGGGC AAGGCTAAGCTATAG |
Gene | >Ani_SJS100_1|g128.t1 ATGTCTCTCAAGAACGGTACGTCTATCCTCTCATCGCCATCCTAATGGTGAGCTGTGGCTGAACATCGTCAACCC CCCCTACAGACGCTTTCCCTTCTTCTGCCGCCTTCGACGCCATCAACTCGACTCTGCAGGCTGATGCTGCCGAGC GCAAAGAGGCCATCAACAAGGCTAAAGCGGTGGTCGCCTTCAACATCAAGAACGACAAGGGCAAAGAAGAGAGCT GGTATCTCGACCTCAAGGACAAGGGTGTTGTGGGCAAGGGTGCTGCTCCCGAAGGAGGAAAGGCTGATGGTGAGT TCAAACAATTATTCGCACCAGATGACGGATCCGATGCTGATGAGGCATCGATGTTATTGCAGTGACTCTCTCTCT TTCGGATGCCGACTTCAGCGCCCTCGTAAGCGGCAAGGCCAATGCCCAGAGGCTCTTTATGGGTGGGAAGCTCAA GATCAAGGGCAACATTATGAAGGCGACCAAGATGGAGCCTGTCCTGAAGAAGGCCCAGGGCAAGGCTAAGCTATA G |