© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1266.t1 |
| Gene name | |
| Location | scaffold_004:577965..580314 |
| Strand | - |
| Gene length (bp) | 2349 |
| Transcript length (bp) | 2163 |
| Coding sequence length (bp) | 2163 |
| Protein length (aa) | 721 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00493 | MCM | MCM P-loop domain | 2.8E-103 | 307 | 529 |
| PF17207 | MCM_OB | MCM OB domain | 4.1E-36 | 125 | 264 |
| PF17855 | MCM_lid | MCM AAA-lid domain | 2.2E-28 | 547 | 636 |
| PF14551 | MCM_N | MCM N-terminal domain | 9.1E-14 | 28 | 101 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0032508 | DNA duplex unwinding | Yes |
| GO:0005524 | ATP binding | Yes |
| GO:0003677 | DNA binding | Yes |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0071103 | DNA conformation change | No |
| GO:0043167 | ion binding | No |
| GO:0032392 | DNA geometric change | No |
| GO:0051276 | chromosome organization | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0003674 | molecular_function | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0009987 | cellular process | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0016043 | cellular component organization | No |
| GO:0043168 | anion binding | No |
| GO:0008150 | biological_process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0006996 | organelle organization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1266.t1 MDRRTPYTLSVLAPSVDGVEDSRSQIRAKLKEFVLEFQLDNAFIYRDQLRQNVLVKQYYCDIDIAHLISYNEELA HKLTTEPADLIPLFESALQDCTRRIVYPSQRDIQLPTHQLLLHSSATHISIRDLNATNISHLVRIPGIVIGASTI SSKATVMHVRCKNCGHHEDLQVDGGFSGVQLPRRCGRQQQPGDPQSEPCPLDPYVVSHEKCQFVDQQVLKLQEAP DQVPVGELPRHVLISADRYLANRVVPGSRCTVMGIFSIYQSSKGGKKDGAVAIRNPYLRAVGISTDLDHTAKGSA IFSEEEEQEFLELSRRPDLYEALAKSIAPSIYGNLDIKKAIVCLLMGGSKKLLPDGMKLRGDINVLLLGDPGTAK SQLLKFTEKVSPIAIYTSGKGSSAAGLTASVQRDHATREFYLEGGAMVLADGGVVCIDEFDKMRDEDRVAIHEAM EQQTISIAKAGITTILNSRTSVLAAANPIFGRYDDLKTPGENIDFQTTILSRFDMIFIVRDDHERSRDESIARHV MGVHMGGRGVEEQVEAEIPLDKMKRYISYCRTRCAPRLSDEAAEKLSSHFVTIRKQVHRAELDANTRSSIPITVR QLEAIVRITESLAKLSLSPVATEAHVDEAIRLFLASTMDAVTQGEGQGSKEMMEEASKIEDELKRRLPIGWSTSL ATLRREFVDGRGYTEQALNRALVVMQRRETVQIRSGGSQVYRHGV* |
| Coding | >Ani_SJS100_1|g1266.t1 ATGGACAGACGCACCCCTTATACCCTGAGTGTCCTCGCTCCTAGCGTCGATGGTGTGGAAGACTCTCGCTCTCAG ATCCGAGCAAAATTAAAGGAGTTTGTGCTCGAATTCCAGCTTGACAATGCATTTATCTACCGTGACCAACTTCGC CAGAATGTTCTGGTCAAGCAATACTATTGCGATATTGATATCGCTCACTTGATCTCATACAACGAAGAGCTAGCA CACAAACTCACCACAGAGCCTGCCGACCTCATTCCCCTCTTTGAATCAGCACTCCAAGATTGTACCCGCCGCATC GTATACCCCTCCCAGAGAGACATCCAACTACCTACCCATCAGCTTCTGCTCCACTCCTCAGCTACACATATCTCG ATCCGTGACCTTAATGCTACCAACATCTCGCACCTTGTTCGTATCCCAGGTATCGTGATTGGAGCTTCGACGATA TCATCCAAGGCGACGGTGATGCACGTTCGGTGCAAGAACTGTGGACACCACGAAGATCTTCAGGTCGATGGTGGT TTCTCGGGTGTTCAACTCCCCAGAAGATGTGGCCGACAGCAACAGCCCGGCGACCCTCAGTCAGAACCCTGCCCC CTTGACCCATACGTTGTGTCGCACGAAAAATGTCAATTTGTCGACCAACAGGTTCTCAAGCTCCAGGAAGCGCCC GATCAAGTGCCCGTGGGTGAGCTTCCCAGGCATGTCCTTATCTCAGCAGACCGTTACCTGGCCAACCGAGTTGTG CCTGGTTCCCGTTGCACAGTGATGGGTATCTTTTCTATCTACCAGTCCTCCAAGGGTGGCAAGAAGGATGGCGCT GTGGCTATCCGCAACCCGTACTTACGGGCGGTGGGCATCAGCACCGATCTGGATCATACCGCCAAGGGTAGCGCC ATTTTCTCTGAAGAAGAAGAGCAGGAGTTCTTGGAACTGAGCCGCCGCCCTGACTTGTATGAGGCTCTTGCCAAA AGCATTGCCCCGTCGATCTATGGGAATCTGGACATCAAAAAGGCCATTGTCTGCCTGCTCATGGGTGGTTCCAAG AAGCTACTTCCCGATGGAATGAAGCTTCGTGGTGACATCAACGTCCTTCTTCTTGGTGACCCTGGTACGGCCAAG TCACAGTTGCTCAAGTTCACTGAGAAAGTCTCCCCAATTGCGATCTATACATCTGGTAAGGGTTCTTCGGCTGCA GGTTTGACGGCCTCGGTGCAGCGCGATCACGCCACTCGTGAGTTCTACCTGGAAGGAGGTGCCATGGTGCTCGCA GACGGTGGTGTTGTTTGTATCGATGAGTTCGACAAGATGAGAGATGAGGACCGTGTTGCTATTCACGAAGCCATG GAGCAGCAGACCATTTCCATCGCCAAGGCCGGAATTACTACTATCCTCAACTCTAGAACGTCTGTTCTAGCCGCA GCAAACCCTATCTTCGGTCGTTATGATGACTTGAAGACTCCCGGTGAAAACATCGACTTCCAGACGACCATTTTG TCTCGTTTCGATATGATCTTCATTGTTCGCGATGATCACGAGCGAAGCCGGGATGAAAGCATAGCCAGACACGTT ATGGGCGTGCATATGGGCGGTCGGGGTGTTGAAGAGCAAGTTGAGGCTGAGATTCCGCTGGACAAGATGAAGCGC TACATCAGCTATTGTCGCACTCGCTGTGCGCCCCGGCTCTCGGATGAAGCTGCTGAGAAGCTGTCGTCCCACTTT GTCACCATCAGAAAGCAAGTCCACCGTGCTGAGCTTGATGCCAACACCCGCTCTTCCATTCCCATTACCGTTCGT CAGCTTGAAGCTATCGTCCGTATCACCGAATCACTGGCCAAATTGAGTCTGTCGCCTGTCGCCACCGAGGCCCAT GTTGATGAAGCCATCCGTCTCTTCTTGGCCTCTACCATGGATGCTGTCACTCAGGGTGAGGGCCAAGGTAGCAAG GAGATGATGGAGGAAGCGAGCAAGATTGAAGACGAACTGAAGCGCCGCCTACCCATTGGGTGGAGCACCAGTCTG GCGACGCTGAGGCGCGAATTTGTCGACGGGAGAGGCTACACGGAACAAGCACTCAACCGGGCATTGGTGGTTATG CAAAGACGAGAAACCGTTCAGATCCGGTCTGGTGGCTCACAAGTATACCGACACGGTGTCTAG |
| Transcript | >Ani_SJS100_1|g1266.t1 ATGGACAGACGCACCCCTTATACCCTGAGTGTCCTCGCTCCTAGCGTCGATGGTGTGGAAGACTCTCGCTCTCAG ATCCGAGCAAAATTAAAGGAGTTTGTGCTCGAATTCCAGCTTGACAATGCATTTATCTACCGTGACCAACTTCGC CAGAATGTTCTGGTCAAGCAATACTATTGCGATATTGATATCGCTCACTTGATCTCATACAACGAAGAGCTAGCA CACAAACTCACCACAGAGCCTGCCGACCTCATTCCCCTCTTTGAATCAGCACTCCAAGATTGTACCCGCCGCATC GTATACCCCTCCCAGAGAGACATCCAACTACCTACCCATCAGCTTCTGCTCCACTCCTCAGCTACACATATCTCG ATCCGTGACCTTAATGCTACCAACATCTCGCACCTTGTTCGTATCCCAGGTATCGTGATTGGAGCTTCGACGATA TCATCCAAGGCGACGGTGATGCACGTTCGGTGCAAGAACTGTGGACACCACGAAGATCTTCAGGTCGATGGTGGT TTCTCGGGTGTTCAACTCCCCAGAAGATGTGGCCGACAGCAACAGCCCGGCGACCCTCAGTCAGAACCCTGCCCC CTTGACCCATACGTTGTGTCGCACGAAAAATGTCAATTTGTCGACCAACAGGTTCTCAAGCTCCAGGAAGCGCCC GATCAAGTGCCCGTGGGTGAGCTTCCCAGGCATGTCCTTATCTCAGCAGACCGTTACCTGGCCAACCGAGTTGTG CCTGGTTCCCGTTGCACAGTGATGGGTATCTTTTCTATCTACCAGTCCTCCAAGGGTGGCAAGAAGGATGGCGCT GTGGCTATCCGCAACCCGTACTTACGGGCGGTGGGCATCAGCACCGATCTGGATCATACCGCCAAGGGTAGCGCC ATTTTCTCTGAAGAAGAAGAGCAGGAGTTCTTGGAACTGAGCCGCCGCCCTGACTTGTATGAGGCTCTTGCCAAA AGCATTGCCCCGTCGATCTATGGGAATCTGGACATCAAAAAGGCCATTGTCTGCCTGCTCATGGGTGGTTCCAAG AAGCTACTTCCCGATGGAATGAAGCTTCGTGGTGACATCAACGTCCTTCTTCTTGGTGACCCTGGTACGGCCAAG TCACAGTTGCTCAAGTTCACTGAGAAAGTCTCCCCAATTGCGATCTATACATCTGGTAAGGGTTCTTCGGCTGCA GGTTTGACGGCCTCGGTGCAGCGCGATCACGCCACTCGTGAGTTCTACCTGGAAGGAGGTGCCATGGTGCTCGCA GACGGTGGTGTTGTTTGTATCGATGAGTTCGACAAGATGAGAGATGAGGACCGTGTTGCTATTCACGAAGCCATG GAGCAGCAGACCATTTCCATCGCCAAGGCCGGAATTACTACTATCCTCAACTCTAGAACGTCTGTTCTAGCCGCA GCAAACCCTATCTTCGGTCGTTATGATGACTTGAAGACTCCCGGTGAAAACATCGACTTCCAGACGACCATTTTG TCTCGTTTCGATATGATCTTCATTGTTCGCGATGATCACGAGCGAAGCCGGGATGAAAGCATAGCCAGACACGTT ATGGGCGTGCATATGGGCGGTCGGGGTGTTGAAGAGCAAGTTGAGGCTGAGATTCCGCTGGACAAGATGAAGCGC TACATCAGCTATTGTCGCACTCGCTGTGCGCCCCGGCTCTCGGATGAAGCTGCTGAGAAGCTGTCGTCCCACTTT GTCACCATCAGAAAGCAAGTCCACCGTGCTGAGCTTGATGCCAACACCCGCTCTTCCATTCCCATTACCGTTCGT CAGCTTGAAGCTATCGTCCGTATCACCGAATCACTGGCCAAATTGAGTCTGTCGCCTGTCGCCACCGAGGCCCAT GTTGATGAAGCCATCCGTCTCTTCTTGGCCTCTACCATGGATGCTGTCACTCAGGGTGAGGGCCAAGGTAGCAAG GAGATGATGGAGGAAGCGAGCAAGATTGAAGACGAACTGAAGCGCCGCCTACCCATTGGGTGGAGCACCAGTCTG GCGACGCTGAGGCGCGAATTTGTCGACGGGAGAGGCTACACGGAACAAGCACTCAACCGGGCATTGGTGGTTATG CAAAGACGAGAAACCGTTCAGATCCGGTCTGGTGGCTCACAAGTATACCGACACGGTGTCTAG |
| Gene | >Ani_SJS100_1|g1266.t1 ATGGACAGACGCACCCCTTATACCCTGAGTGTCCTCGCTCCTAGCGTCGATGGTGTGGAAGACTCTCGCTCTCAG ATCCGAGCAAAATTAAAGGAGTTTGTGCTCGAATTCCAGCTTGACAATGCATTTATCTACCGGTATGTTTGGCGC TGGGCCAGATACAGTGAAGGTTAAAGTAAACAAAAGCTAAGGTGGATGACAGTGACCAACTTCGCCAGAATGTTC TGGTCAAGCAATACTATTGCGATATTGATATCGCTCACTTGATCTCATACAACGAAGAGCTAGCACACAAACTCA CCACAGAGCCTGCCGACCTCATTCCCCTCGTGAGTATTCGTCCATCATCTTTGGACCTTATCCTGACTAACCATG CATTTTAGTTTGAATCAGCACTCCAAGATTGTACCCGCCGCATCGTATACCCCTCCCAGAGAGACATCCAACTAC CTACCCATCAGCTTCTGCTCCACTCCTCAGCTACACATATCTCGATCCGTGACCTTAATGCTACCAACATCTCGC ACCTTGTTCGTATCCCAGGTATCGTGATTGGAGCTTCGACGATATCATCCAAGGCGACGGTGATGCACGTTCGGT GCAAGAACTGTGGACACCACGAAGATCTTCAGGTCGATGGTGGTTTCTCGGGTGTTCAACTCCCCAGAAGATGTG GCCGACAGCAACAGCCCGGCGACCCTCAGTCAGAACCCTGCCCCCTTGACCCATACGTTGTGTCGCACGAAAAAT GTCAATTTGTCGACCAACAGGTTCTCAAGCTCCAGGAAGCGCCCGATCAAGTGCCCGTGGGTGAGCTTCCCAGGC ATGTCCTTATCTCAGCAGACCGTTACCTGGCCAACCGAGTTGTGCCTGGTTCCCGTTGCACAGTGATGGGTATCT TTTCTATCTACCAGTCCTCCAAGGGTGGCAAGAAGGATGGCGCTGTGGCTATCCGCAACCCGTACTTACGGGCGG TGGGCATCAGCACCGATCTGGATCATACCGCCAAGGGTAGCGCCATTTTCTCTGAAGAAGAAGAGCAGGAGTTCT TGGAACTGAGCCGCCGCCCTGACTTGTATGAGGCTCTTGCCAAAAGCATTGCCCCGTCGATCTATGGGAATCTGG ACATCAAAAAGGCCATTGTCTGCCTGCTCATGGGTGGTTCCAAGAAGCTACTTCCCGATGGAATGAAGCTTCGTG GTGACATCAACGTCCTTCTTCTTGGTGACCCTGGTACGGCCAAGTCACAGTTGCTCAAGTTCACTGAGAAAGTCT CCCCAATTGCGATCTATACATCTGGTAAGGGTTCTTCGGCTGCAGGTTTGACGGCCTCGGTGCAGCGCGATCACG CCACTCGTGAGTTCTACCTGGAAGGAGGTGCCATGGTGCTCGCAGACGGTGGTGTTGTTTGTATCGATGAGTTCG ACAAGATGAGAGATGAGGACCGTGTTGCTATTCACGAAGCCATGGAGCAGCAGACCATTTCCATCGCCAAGGCCG GAATTACTACTATCCTCAACTCTAGAACGTCTGTTCTAGCCGCAGCAAACCCTATCTTCGGTCGTTATGATGACT TGAAGACTCCCGGTGAAAACATCGACTTCCAGACGACCATTTTGTCTCGTTTCGATATGATCTTCATTGTTCGCG ATGATCACGAGCGAAGCCGGGATGAAAGCATAGCCAGACACGTTATGGGCGTGCATATGGGCGGTCGGGGTGTTG AAGAGCAAGTTGAGGCTGAGATTCCGCTGGACAAGATGAAGCGCTACATCAGCTATTGTCGCACGTAAGTTGTCC TCCTTCGTCATCGTATACTCCACATATGAATCACGAACGCTAATATATCATTACAGTCGCTGTGCGCCCCGGCTC TCGGATGAAGCTGCTGAGAAGCTGTCGTCCCACTTTGTCACCATCAGAAAGCAAGTCCACCGTGCTGAGCTTGAT GCCAACACCCGCTCTTCCATTCCCATTACCGTTCGTCAGCTTGAAGCTATCGTCCGTATCACCGAATCACTGGCC AAATTGAGTCTGTCGCCTGTCGCCACCGAGGCCCATGTTGATGAAGCCATCCGTCTCTTCTTGGCCTCTACCATG GATGCTGTCACTCAGGGTGAGGGCCAAGGTAGCAAGGAGATGATGGAGGAAGCGAGCAAGATTGAAGACGAACTG AAGCGCCGCCTACCCATTGGGTGGAGCACCAGTCTGGCGACGCTGAGGCGCGAATTTGTCGACGGGAGAGGCTAC ACGGAACAAGCACTCAACCGGGCATTGGTGGTTATGCAAAGACGAGAAACCGTTCAGATCCGGTCTGGTGGCTCA CAAGTATACCGACACGGTGTCTAG |