Protein ID | Ani_SJS100_1|g1263.t1 |
Gene name | |
Location | scaffold_004:568928..571083 |
Strand | + |
Gene length (bp) | 2155 |
Transcript length (bp) | 1935 |
Coding sequence length (bp) | 1935 |
Protein length (aa) | 645 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09734 | Tau95 | RNA polymerase III transcription factor (TF)IIIC subunit HTH domain | 1.9E-41 | 197 | 348 |
PF17682 | Tau95_N | Tau95 Triple barrel domain | 9.3E-38 | 21 | 157 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1263.t1 MTDQHGARTAPFYQIPSRRIVSVEHPAIIRNLDKAVDTLKGDAGITKILHPPKPDSPAHLLLRPEDAMSRPLQST SLPSNNILLKVTVPKRTGRKRKKGSNEPFSGVAVSTVHTEPQRRSARELQRSLSDNVSKYQVEPVGLVNRTHVFR GMPDFVFSTGSSSFANRFREQILPFDYDKMKQFDLEMSKGAITDVDIIPPPSFSFGDIPFTYIYRQNPTVRQAID NSGNITTVNTQRVVKVLTHLVSYDVATVPTSPRANCPPIHTLDKTLQETISAVESLFQQRPAWTRRGLRNSLPTI EQRYALRHAIPYVGYIFRSGPWRDAIIKYGHDPRTDPSYRIYQTAMFRILPREAEVARDGYTGRRHAVARAGEVP QYLDETHHQHPDQPTETQQLPTTTHLFTGCLPLPRDGRMWMFCDVTDPTLRSILFPSDPPPAGFLREECDILTDG WFGNGTLAKTKTIMRAKVLALLDDKMLDDEVEFANILRLPDHATPESVMVDFWLDPAVASQREMMMATEVRGIIK GAPAWKERVGGGSGKKGAGRDEVGDEGDRKGKKRADRRVQFQDEVGGDGDGGGEMLSEGEEEAYEQEELAEAVAE AAASVGGEEDDEDEEEDEEQSDDGEDEDTEMGGVETTRATRRRA* |
Coding | >Ani_SJS100_1|g1263.t1 ATGACAGACCAACATGGCGCAAGGACAGCCCCATTCTACCAAATTCCCTCGCGTCGCATTGTCAGCGTTGAGCAC CCAGCCATTATCAGAAACCTTGACAAGGCCGTCGACACGCTGAAGGGCGATGCGGGTATAACCAAAATATTGCAC CCCCCGAAGCCTGATAGCCCGGCCCATCTGCTTCTCCGGCCGGAGGATGCCATGTCCAGGCCGCTTCAGTCGACC AGCTTACCGTCCAACAACATCCTTTTGAAGGTGACGGTACCAAAAAGAACAGGTCGCAAGCGAAAGAAGGGGTCA AATGAGCCCTTCAGCGGTGTTGCTGTGTCTACAGTGCATACGGAGCCACAACGGCGCAGTGCACGAGAACTGCAG CGGAGTCTAAGTGATAATGTATCCAAGTATCAGGTTGAGCCAGTGGGCTTGGTTAACCGGACACATGTGTTTCGA GGAATGCCGGACTTTGTCTTCTCTACCGGCTCCAGTTCCTTTGCCAACCGGTTCCGGGAGCAGATATTGCCATTT GACTACGACAAAATGAAACAATTCGACCTCGAAATGAGCAAAGGCGCCATCACTGACGTAGACATCATACCCCCA CCATCCTTCAGCTTCGGAGACATCCCCTTCACCTACATCTACCGCCAAAACCCCACCGTCAGACAAGCCATCGAC AACTCGGGCAACATAACAACAGTCAACACACAACGAGTAGTCAAAGTACTAACCCACCTCGTATCCTACGACGTC GCCACAGTCCCGACCTCCCCTCGGGCCAACTGTCCTCCCATCCACACCCTGGACAAAACCCTCCAAGAAACCATC AGCGCCGTAGAATCCCTCTTCCAACAGCGCCCCGCCTGGACCCGACGAGGCCTACGCAACTCCCTCCCAACAATC GAACAACGCTACGCCCTCCGCCACGCAATCCCCTACGTCGGCTACATCTTCCGCTCAGGACCCTGGCGCGATGCC ATAATCAAATACGGCCACGACCCACGCACCGACCCCTCCTACCGAATTTACCAAACAGCCATGTTCCGGATCCTA CCACGCGAAGCCGAAGTCGCACGGGACGGCTACACAGGCCGTCGACACGCCGTGGCCCGCGCCGGCGAAGTACCC CAATACCTGGACGAAACTCATCACCAACACCCAGATCAACCTACAGAAACACAACAACTCCCCACAACAACCCAC CTCTTCACAGGGTGCTTGCCGCTCCCGCGCGACGGGCGGATGTGGATGTTCTGCGACGTGACGGACCCAACACTC CGGAGCATACTATTCCCATCTGATCCGCCACCGGCGGGGTTCCTGCGCGAGGAATGCGATATCCTGACGGATGGA TGGTTCGGGAACGGAACGCTAGCGAAGACGAAGACGATTATGCGGGCGAAGGTTCTTGCGCTGTTGGATGATAAG ATGCTGGATGATGAGGTCGAGTTTGCGAATATTCTGAGGTTGCCGGATCATGCGACGCCGGAGTCGGTCATGGTG GACTTTTGGCTGGATCCGGCGGTGGCGTCGCAGAGGGAGATGATGATGGCGACGGAGGTGAGGGGGATTATTAAG GGGGCACCGGCGTGGAAGGAGAGGGTTGGTGGTGGAAGTGGGAAGAAGGGGGCGGGGAGGGATGAGGTTGGGGAT GAGGGGGATAGGAAGGGGAAGAAGAGGGCGGATCGGAGGGTGCAGTTTCAGGATGAAGTGGGTGGTGATGGTGAT GGTGGCGGGGAGATGTTGAGTGAGGGGGAGGAAGAGGCTTATGAGCAGGAAGAGCTGGCGGAGGCTGTGGCGGAA GCGGCGGCGTCGGTTGGAGGAGAAGAGGATGATGAGGATGAAGAAGAGGATGAGGAACAGTCTGATGATGGGGAA GATGAGGATACGGAGATGGGTGGGGTTGAGACTACAAGAGCTACGAGACGAAGAGCTTAG |
Transcript | >Ani_SJS100_1|g1263.t1 ATGACAGACCAACATGGCGCAAGGACAGCCCCATTCTACCAAATTCCCTCGCGTCGCATTGTCAGCGTTGAGCAC CCAGCCATTATCAGAAACCTTGACAAGGCCGTCGACACGCTGAAGGGCGATGCGGGTATAACCAAAATATTGCAC CCCCCGAAGCCTGATAGCCCGGCCCATCTGCTTCTCCGGCCGGAGGATGCCATGTCCAGGCCGCTTCAGTCGACC AGCTTACCGTCCAACAACATCCTTTTGAAGGTGACGGTACCAAAAAGAACAGGTCGCAAGCGAAAGAAGGGGTCA AATGAGCCCTTCAGCGGTGTTGCTGTGTCTACAGTGCATACGGAGCCACAACGGCGCAGTGCACGAGAACTGCAG CGGAGTCTAAGTGATAATGTATCCAAGTATCAGGTTGAGCCAGTGGGCTTGGTTAACCGGACACATGTGTTTCGA GGAATGCCGGACTTTGTCTTCTCTACCGGCTCCAGTTCCTTTGCCAACCGGTTCCGGGAGCAGATATTGCCATTT GACTACGACAAAATGAAACAATTCGACCTCGAAATGAGCAAAGGCGCCATCACTGACGTAGACATCATACCCCCA CCATCCTTCAGCTTCGGAGACATCCCCTTCACCTACATCTACCGCCAAAACCCCACCGTCAGACAAGCCATCGAC AACTCGGGCAACATAACAACAGTCAACACACAACGAGTAGTCAAAGTACTAACCCACCTCGTATCCTACGACGTC GCCACAGTCCCGACCTCCCCTCGGGCCAACTGTCCTCCCATCCACACCCTGGACAAAACCCTCCAAGAAACCATC AGCGCCGTAGAATCCCTCTTCCAACAGCGCCCCGCCTGGACCCGACGAGGCCTACGCAACTCCCTCCCAACAATC GAACAACGCTACGCCCTCCGCCACGCAATCCCCTACGTCGGCTACATCTTCCGCTCAGGACCCTGGCGCGATGCC ATAATCAAATACGGCCACGACCCACGCACCGACCCCTCCTACCGAATTTACCAAACAGCCATGTTCCGGATCCTA CCACGCGAAGCCGAAGTCGCACGGGACGGCTACACAGGCCGTCGACACGCCGTGGCCCGCGCCGGCGAAGTACCC CAATACCTGGACGAAACTCATCACCAACACCCAGATCAACCTACAGAAACACAACAACTCCCCACAACAACCCAC CTCTTCACAGGGTGCTTGCCGCTCCCGCGCGACGGGCGGATGTGGATGTTCTGCGACGTGACGGACCCAACACTC CGGAGCATACTATTCCCATCTGATCCGCCACCGGCGGGGTTCCTGCGCGAGGAATGCGATATCCTGACGGATGGA TGGTTCGGGAACGGAACGCTAGCGAAGACGAAGACGATTATGCGGGCGAAGGTTCTTGCGCTGTTGGATGATAAG ATGCTGGATGATGAGGTCGAGTTTGCGAATATTCTGAGGTTGCCGGATCATGCGACGCCGGAGTCGGTCATGGTG GACTTTTGGCTGGATCCGGCGGTGGCGTCGCAGAGGGAGATGATGATGGCGACGGAGGTGAGGGGGATTATTAAG GGGGCACCGGCGTGGAAGGAGAGGGTTGGTGGTGGAAGTGGGAAGAAGGGGGCGGGGAGGGATGAGGTTGGGGAT GAGGGGGATAGGAAGGGGAAGAAGAGGGCGGATCGGAGGGTGCAGTTTCAGGATGAAGTGGGTGGTGATGGTGAT GGTGGCGGGGAGATGTTGAGTGAGGGGGAGGAAGAGGCTTATGAGCAGGAAGAGCTGGCGGAGGCTGTGGCGGAA GCGGCGGCGTCGGTTGGAGGAGAAGAGGATGATGAGGATGAAGAAGAGGATGAGGAACAGTCTGATGATGGGGAA GATGAGGATACGGAGATGGGTGGGGTTGAGACTACAAGAGCTACGAGACGAAGAGCTTAG |
Gene | >Ani_SJS100_1|g1263.t1 ATGACAGACCAACATGGCGCAAGGACAGCCCCATTCTACCAAATTCCCTCGCGTCGCATTGTCAGCGTTGAGCAC CCAGCCATTATCAGAAACCTTGACAAGGCCGTCGACACGCTGAAGGGCGATGCGGGTATAACCAAAGTACGTTAA TCCATCCCATTTATTACCGCTCAGGAAAAACTGACAAAGTACTTCAGATATTGCACCCCCCGAAGCCTGATAGCC CGGCCCATCTGCTTCTCCGGCCGGAGGATGCCATGTCCAGGCCGCTTCAGTCGACCAGCTTACCGTCCAACAACA TCCTTTTGAAGGTGACGGTACCAAAAAGAACAGGTCGCAAGCGAAAGAAGGGGTCAAATGAGCCCTTCAGCGGTG TTGCTGTGTCTACAGTGCATACGGAGCCACAACGGCGCAGTGCACGAGAACTGCAGCGGAGTCTAAGTGATAATG TATCCAAGTATCAGGTTGAGCCAGTGGGCTTGGTTAACCGGACACATGTGTTTCGAGGTGGGTCTACGGTCTACA TACATGTATCATTTTGCAATGATGCTAATACGAACAGGAATGCCGGACTTTGTCTTCTCTACCGGCTCCAGTTCC TTTGCCAACCGGTTCCGGGAGCAGATATTGCCATTTGACTGTACGAGTCCTGCCACCACATCACCCACTAACAGC AAACTAACTGGATACAGACGACAAAATGAAACAATTCGACCTCGAAATGAGCAAAGGCGCCATCACTGACGTAGA CATCATACCCCCACCATCCTTCAGCTTCGGAGACATCCCCTTCACCTACATGTAAGTCCCATCCCCATCACCTTC CCATCCCAACATACAACTAACGACAAACCAAAGCTACCGCCAAAACCCCACCGTCAGACAAGCCATCGACAACTC GGGCAACATAACAACAGTCAACACACAACGAGTAGTCAAAGTACTAACCCACCTCGTATCCTACGACGTCGCCAC AGTCCCGACCTCCCCTCGGGCCAACTGTCCTCCCATCCACACCCTGGACAAAACCCTCCAAGAAACCATCAGCGC CGTAGAATCCCTCTTCCAACAGCGCCCCGCCTGGACCCGACGAGGCCTACGCAACTCCCTCCCAACAATCGAACA ACGCTACGCCCTCCGCCACGCAATCCCCTACGTCGGCTACATCTTCCGCTCAGGACCCTGGCGCGATGCCATAAT CAAATACGGCCACGACCCACGCACCGACCCCTCCTACCGAATTTACCAAACAGCCATGTTCCGGATCCTACCACG CGAAGCCGAAGTCGCACGGGACGGCTACACAGGCCGTCGACACGCCGTGGCCCGCGCCGGCGAAGTACCCCAATA CCTGGACGAAACTCATCACCAACACCCAGATCAACCTACAGAAACACAACAACTCCCCACAACAACCCACCTCTT CACAGGGTGCTTGCCGCTCCCGCGCGACGGGCGGATGTGGATGTTCTGCGACGTGACGGACCCAACACTCCGGAG CATACTATTCCCATCTGATCCGCCACCGGCGGGGTTCCTGCGCGAGGAATGCGATATCCTGACGGATGGATGGTT CGGGAACGGAACGCTAGCGAAGACGAAGACGATTATGCGGGCGAAGGTTCTTGCGCTGTTGGATGATAAGATGCT GGATGATGAGGTCGAGTTTGCGAATATTCTGAGGTTGCCGGATCATGCGACGCCGGAGTCGGTCATGGTGGACTT TTGGCTGGATCCGGCGGTGGCGTCGCAGAGGGAGATGATGATGGCGACGGAGGTGAGGGGGATTATTAAGGGGGC ACCGGCGTGGAAGGAGAGGGTTGGTGGTGGAAGTGGGAAGAAGGGGGCGGGGAGGGATGAGGTTGGGGATGAGGG GGATAGGAAGGGGAAGAAGAGGGCGGATCGGAGGGTGCAGTTTCAGGATGAAGTGGGTGGTGATGGTGATGGTGG CGGGGAGATGTTGAGTGAGGGGGAGGAAGAGGCTTATGAGCAGGAAGAGCTGGCGGAGGCTGTGGCGGAAGCGGC GGCGTCGGTTGGAGGAGAAGAGGATGATGAGGATGAAGAAGAGGATGAGGAACAGTCTGATGATGGGGAAGATGA GGATACGGAGATGGGTGGGGTTGAGACTACAAGAGCTACGAGACGAAGAGCTTAG |