© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1258.t1 |
| Gene name | |
| Location | scaffold_004:545860..546863 |
| Strand | + |
| Gene length (bp) | 1003 |
| Transcript length (bp) | 948 |
| Coding sequence length (bp) | 948 |
| Protein length (aa) | 316 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.4E-24 | 6 | 258 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 45 | 67 | 22 |
| 3 | 77 | 99 | 22 |
| 4 | 119 | 141 | 22 |
| 5 | 151 | 173 | 22 |
| 6 | 180 | 202 | 22 |
| 7 | 212 | 234 | 22 |
| 8 | 247 | 269 | 22 |
| 9 | 284 | 306 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1258.t1 MMFLSVSHEYYQFILGFSILGGLSASAVYTPSAACITHWFLKRRGLATGIATTGGGIGGIIFTNVFGILSNKIGF PWTIRILGFIFLASLMVSLLTLEARLPPSPSAGNKIDIRALKEPVFTMTSIAVIFAEIGLIVLVTYYPSYAQSHG ITGALSYQLMTIMSATSIFGRVIPGVLADIWGRFNVMFGTCAVCTILSFGLWFTAGTDKACILAFAALVGFWSGP AISLTPVCVAQISKTESYGKRFGTTIALMAFALLVAIPVAGEILKGQNRGKVETEYSGLIGFSGAAYAGACLFLF LAKGASVGWRVTKVF* |
| Coding | >Ani_SJS100_1|g1258.t1 ATGATGTTCCTCAGCGTCTCCCACGAATACTACCAGTTCATCTTGGGATTCAGCATTTTAGGTGGGCTCTCTGCA TCAGCAGTGTACACACCCAGTGCTGCGTGCATCACGCACTGGTTCCTCAAAAGACGTGGTCTAGCGACCGGGATC GCGACGACAGGGGGTGGCATTGGAGGAATTATCTTCACCAATGTGTTCGGTATCCTGAGCAATAAAATTGGGTTT CCCTGGACTATTCGCATCCTGGGATTTATATTCCTCGCTAGCCTAATGGTCAGCCTGCTTACTCTCGAAGCACGT CTCCCACCTAGTCCGTCAGCAGGGAACAAGATCGACATTCGCGCGCTCAAGGAGCCCGTCTTCACCATGACTTCC ATCGCCGTCATTTTCGCGGAAATCGGCTTGATAGTCCTAGTCACCTATTATCCGTCCTATGCACAATCGCACGGC ATCACTGGCGCCCTTTCCTACCAGCTCATGACGATCATGAGCGCAACATCTATCTTCGGCCGCGTCATTCCGGGA GTCTTAGCGGATATATGGGGCCGCTTCAACGTTATGTTTGGGACCTGTGCTGTATGTACTATTCTGTCCTTTGGT CTATGGTTTACGGCGGGCACCGACAAAGCTTGTATCCTGGCTTTCGCGGCATTAGTCGGGTTTTGGAGCGGACCA GCGATAAGTCTGACACCCGTCTGCGTGGCTCAAATCTCCAAAACTGAGAGCTATGGCAAACGATTCGGTACAACA ATCGCGCTGATGGCGTTTGCGTTGTTAGTTGCCATTCCTGTGGCTGGTGAGATCTTGAAGGGGCAGAATCGGGGG AAAGTAGAGACAGAGTATTCCGGCTTGATTGGGTTCAGTGGAGCGGCATATGCTGGAGCCTGTCTATTTCTGTTT CTGGCCAAGGGAGCCAGTGTTGGTTGGCGGGTTACAAAGGTATTTTGA |
| Transcript | >Ani_SJS100_1|g1258.t1 ATGATGTTCCTCAGCGTCTCCCACGAATACTACCAGTTCATCTTGGGATTCAGCATTTTAGGTGGGCTCTCTGCA TCAGCAGTGTACACACCCAGTGCTGCGTGCATCACGCACTGGTTCCTCAAAAGACGTGGTCTAGCGACCGGGATC GCGACGACAGGGGGTGGCATTGGAGGAATTATCTTCACCAATGTGTTCGGTATCCTGAGCAATAAAATTGGGTTT CCCTGGACTATTCGCATCCTGGGATTTATATTCCTCGCTAGCCTAATGGTCAGCCTGCTTACTCTCGAAGCACGT CTCCCACCTAGTCCGTCAGCAGGGAACAAGATCGACATTCGCGCGCTCAAGGAGCCCGTCTTCACCATGACTTCC ATCGCCGTCATTTTCGCGGAAATCGGCTTGATAGTCCTAGTCACCTATTATCCGTCCTATGCACAATCGCACGGC ATCACTGGCGCCCTTTCCTACCAGCTCATGACGATCATGAGCGCAACATCTATCTTCGGCCGCGTCATTCCGGGA GTCTTAGCGGATATATGGGGCCGCTTCAACGTTATGTTTGGGACCTGTGCTGTATGTACTATTCTGTCCTTTGGT CTATGGTTTACGGCGGGCACCGACAAAGCTTGTATCCTGGCTTTCGCGGCATTAGTCGGGTTTTGGAGCGGACCA GCGATAAGTCTGACACCCGTCTGCGTGGCTCAAATCTCCAAAACTGAGAGCTATGGCAAACGATTCGGTACAACA ATCGCGCTGATGGCGTTTGCGTTGTTAGTTGCCATTCCTGTGGCTGGTGAGATCTTGAAGGGGCAGAATCGGGGG AAAGTAGAGACAGAGTATTCCGGCTTGATTGGGTTCAGTGGAGCGGCATATGCTGGAGCCTGTCTATTTCTGTTT CTGGCCAAGGGAGCCAGTGTTGGTTGGCGGGTTACAAAGGTATTTTGA |
| Gene | >Ani_SJS100_1|g1258.t1 ATGATGTTCCTCAGCGTCTCCCACGGTACGGTTGGATATCTCCAGCCCCGGTTTCATGGACTGACTTTTGCCTGG TCAAGAATACTACCAGTTCATCTTGGGATTCAGCATTTTAGGTGGGCTCTCTGCATCAGCAGTGTACACACCCAG TGCTGCGTGCATCACGCACTGGTTCCTCAAAAGACGTGGTCTAGCGACCGGGATCGCGACGACAGGGGGTGGCAT TGGAGGAATTATCTTCACCAATGTGTTCGGTATCCTGAGCAATAAAATTGGGTTTCCCTGGACTATTCGCATCCT GGGATTTATATTCCTCGCTAGCCTAATGGTCAGCCTGCTTACTCTCGAAGCACGTCTCCCACCTAGTCCGTCAGC AGGGAACAAGATCGACATTCGCGCGCTCAAGGAGCCCGTCTTCACCATGACTTCCATCGCCGTCATTTTCGCGGA AATCGGCTTGATAGTCCTAGTCACCTATTATCCGTCCTATGCACAATCGCACGGCATCACTGGCGCCCTTTCCTA CCAGCTCATGACGATCATGAGCGCAACATCTATCTTCGGCCGCGTCATTCCGGGAGTCTTAGCGGATATATGGGG CCGCTTCAACGTTATGTTTGGGACCTGTGCTGTATGTACTATTCTGTCCTTTGGTCTATGGTTTACGGCGGGCAC CGACAAAGCTTGTATCCTGGCTTTCGCGGCATTAGTCGGGTTTTGGAGCGGACCAGCGATAAGTCTGACACCCGT CTGCGTGGCTCAAATCTCCAAAACTGAGAGCTATGGCAAACGATTCGGTACAACAATCGCGCTGATGGCGTTTGC GTTGTTAGTTGCCATTCCTGTGGCTGGTGAGATCTTGAAGGGGCAGAATCGGGGGAAAGTAGAGACAGAGTATTC CGGCTTGATTGGGTTCAGTGGAGCGGCATATGCTGGAGCCTGTCTATTTCTGTTTCTGGCCAAGGGAGCCAGTGT TGGTTGGCGGGTTACAAAGGTATTTTGA |