Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1254.t1
Gene name
Locationscaffold_004:533641..535403
Strand+
Gene length (bp)1762
Transcript length (bp)1311
Coding sequence length (bp)1311
Protein length (aa) 437

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 2.3E-10 79 199

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1254.t1
MPRPIERNRCLEAKFAGHGELNVMGNDPAVRLVSEVPATVTGSSKSVLPLRKAPLLHQPVLGAPPEHALQDPQVA
KIFCHYMENLAAWYDLNDSRRHFKDIVPIRARRNPLLLSAILAFSAANLHRTRGDHIYLKLAEAYHYDSVRSLIS
LTKNIDQLPFGETLAAVCLLRSYEIITQNVSSQSHLQGCYSLLATRHVHLTADLLSAGYWNYLREDITVALIEHR
GLMITLSDQDAPPQPTDDMDFANYITFLLGRVINRCLAVDSPPLDIIEWKALKADIDQWRSALPPSFDTIQTPGL
KTRSNFPSIWTLRSWHVSTLHYYHTAMGILWLAQPAAWPLKALQRIDDMDCLRQRLDYHATEICALAISSESASV
WVNAFGPVAFCGTWLQSTPRRVELVEEVEKWGNVAGWPVSIITAALSPSSSSSSSSLNTTQ*
Coding >Ani_SJS100_1|g1254.t1
ATGCCCCGACCAATTGAACGAAACCGCTGTCTTGAAGCCAAGTTTGCAGGTCACGGAGAATTAAATGTGATGGGA
AACGACCCAGCTGTTCGCCTTGTCAGCGAAGTTCCCGCCACTGTTACTGGATCCAGCAAATCGGTACTGCCGCTT
CGCAAGGCACCGCTTCTTCATCAGCCCGTTCTGGGAGCTCCCCCCGAGCATGCCCTGCAAGATCCACAGGTTGCG
AAGATATTTTGTCACTATATGGAGAACCTTGCTGCGTGGTATGACCTGAACGATAGTAGGCGTCATTTCAAGGAC
ATCGTTCCGATCCGAGCGCGACGTAATCCGCTATTACTCAGTGCTATCCTCGCCTTTTCCGCTGCTAATCTGCAC
CGCACTCGGGGAGACCATATCTATCTAAAACTCGCAGAAGCTTATCACTATGACAGTGTTCGGAGTTTGATATCT
CTCACCAAGAACATCGATCAGCTCCCCTTTGGAGAGACCTTGGCTGCTGTTTGTCTTCTTCGCTCTTACGAAATA
ATAACACAAAATGTCAGCTCACAGAGTCATCTGCAAGGATGTTATTCTCTTTTGGCTACTCGGCATGTTCACCTC
ACCGCAGACTTACTCAGTGCTGGCTACTGGAACTATCTCCGCGAAGACATCACAGTAGCCCTCATTGAGCATCGA
GGACTCATGATCACTCTATCGGACCAAGATGCTCCTCCACAACCTACCGATGATATGGACTTTGCGAATTATATC
ACTTTTCTCCTGGGACGGGTTATAAACCGGTGTTTAGCTGTGGATTCTCCGCCTTTAGACATTATCGAGTGGAAA
GCCCTGAAGGCCGATATCGACCAGTGGAGATCCGCTCTACCCCCATCATTTGATACAATACAAACGCCAGGGCTA
AAAACACGGAGCAACTTTCCATCCATATGGACACTGAGAAGCTGGCACGTATCTACACTCCATTACTACCATACC
GCTATGGGTATTCTTTGGCTGGCCCAGCCGGCAGCGTGGCCCTTGAAAGCTTTACAGCGCATAGATGATATGGAT
TGCTTGCGTCAAAGACTTGACTATCATGCGACTGAAATCTGCGCGTTGGCCATTTCAAGTGAGAGTGCGTCTGTA
TGGGTCAATGCTTTTGGGCCGGTCGCCTTTTGTGGAACCTGGCTTCAAAGCACACCAAGGCGTGTGGAATTAGTC
GAGGAGGTAGAGAAATGGGGGAATGTTGCGGGATGGCCAGTATCAATCATTACAGCTGCACTGTCTCCCTCCTCC
TCCTCCTCCTCCTCCTCCCTGAATACCACCCAATAA
Transcript >Ani_SJS100_1|g1254.t1
ATGCCCCGACCAATTGAACGAAACCGCTGTCTTGAAGCCAAGTTTGCAGGTCACGGAGAATTAAATGTGATGGGA
AACGACCCAGCTGTTCGCCTTGTCAGCGAAGTTCCCGCCACTGTTACTGGATCCAGCAAATCGGTACTGCCGCTT
CGCAAGGCACCGCTTCTTCATCAGCCCGTTCTGGGAGCTCCCCCCGAGCATGCCCTGCAAGATCCACAGGTTGCG
AAGATATTTTGTCACTATATGGAGAACCTTGCTGCGTGGTATGACCTGAACGATAGTAGGCGTCATTTCAAGGAC
ATCGTTCCGATCCGAGCGCGACGTAATCCGCTATTACTCAGTGCTATCCTCGCCTTTTCCGCTGCTAATCTGCAC
CGCACTCGGGGAGACCATATCTATCTAAAACTCGCAGAAGCTTATCACTATGACAGTGTTCGGAGTTTGATATCT
CTCACCAAGAACATCGATCAGCTCCCCTTTGGAGAGACCTTGGCTGCTGTTTGTCTTCTTCGCTCTTACGAAATA
ATAACACAAAATGTCAGCTCACAGAGTCATCTGCAAGGATGTTATTCTCTTTTGGCTACTCGGCATGTTCACCTC
ACCGCAGACTTACTCAGTGCTGGCTACTGGAACTATCTCCGCGAAGACATCACAGTAGCCCTCATTGAGCATCGA
GGACTCATGATCACTCTATCGGACCAAGATGCTCCTCCACAACCTACCGATGATATGGACTTTGCGAATTATATC
ACTTTTCTCCTGGGACGGGTTATAAACCGGTGTTTAGCTGTGGATTCTCCGCCTTTAGACATTATCGAGTGGAAA
GCCCTGAAGGCCGATATCGACCAGTGGAGATCCGCTCTACCCCCATCATTTGATACAATACAAACGCCAGGGCTA
AAAACACGGAGCAACTTTCCATCCATATGGACACTGAGAAGCTGGCACGTATCTACACTCCATTACTACCATACC
GCTATGGGTATTCTTTGGCTGGCCCAGCCGGCAGCGTGGCCCTTGAAAGCTTTACAGCGCATAGATGATATGGAT
TGCTTGCGTCAAAGACTTGACTATCATGCGACTGAAATCTGCGCGTTGGCCATTTCAAGTGAGAGTGCGTCTGTA
TGGGTCAATGCTTTTGGGCCGGTCGCCTTTTGTGGAACCTGGCTTCAAAGCACACCAAGGCGTGTGGAATTAGTC
GAGGAGGTAGAGAAATGGGGGAATGTTGCGGGATGGCCAGTATCAATCATTACAGCTGCACTGTCTCCCTCCTCC
TCCTCCTCCTCCTCCTCCCTGAATACCACCCAATAA
Gene >Ani_SJS100_1|g1254.t1
ATGCCCCGACCAATTGAACGAAACCGTAAGTGACCTGTTCCGTCCCTTAATGGAACCCCTGTCCTGATGTAACAT
AAGGCTGGTAAGGAACACTCGATCGAATACAATAAGTCTCCTTGCAATTTGATCCCATAACTGGTTGGGTAGGTA
ACCACTGCTAACTGGCAGTCTTGAAGCCAAGTTTGCAGGTCACGGAGAATTAAATGTTAGTATTGACTCCATATG
ACGCTTTCGACCGGCGGGTGCTGATCCACCGAACGCACAGGTGATGGGAAACGACCCAGCTGTTCGCCTTGTCAG
CGAAGTTCCCGCCACTGTTACTGGATCCAGCAAATCGGTACTGCCGCTTCGCAAGGCACCGCTTCTTCATCAGCC
CGTTCTGGGAGCTCGTTAAGTGCAACGGTAGACCCTGAAGCTGAATACCCGTCGGCTCAAGCCCCCGAGCATGCC
CTGCAAGATCCACAGGTTGCGAAGATATTTTGTCACTATATGGAGAACCTTGCTGCGTGGTATGACCTGAACGAT
AGTAGGCGTCATTTCAAGGACATCGTTCCGATCCGAGCGCGACGTAATCCGCTATTACTCAGTGCTATCCTCGCC
TTTTCCGCTGCTAATCTGCACCGCACTCGGGGAGACCATATCTATCTAAAACTCGCAGAAGCTTATCACTATGAC
AGTGTTCGGAGTTTGATATCTCTCACCAAGAACATCGATCAGCTCCCCTTTGGAGAGACCTTGGCTGCTGTTTGT
CTTCTTCGCTCTTACGAAATAATAACACGTTAGTAGATCCTACGACCTAGGGTTCCCCACCTCATCTTTTCATCT
GTCGCGGCTAAAGCTAACGGCATGATGGCTATCTATGATTAGAAAATGTCAGCTCACAGAGTCATCTGCAAGGAT
GTTATTCTCTTTTGGCTACTCGGCATGTTCACCTCACCGCAGACTTACTCAGTGCTGGCTACTGGAACTATCTCC
GCGAAGACATCACAGTAGCCCTCATTGAGCATCGAGGACTCATGATCACTCTATCGGACCAAGATGCTCCTCCAC
AACCTACCGATGATATGGACTTTGCGAATTATATCACTTTTCTCCTGGGACGGGTTATAAACCGGTGTTTAGCTG
TGGATTCTCCGCCTTTAGACATTATCGAGTGGAAAGCCCTGAAGGCCGATATCGACCAGTGGAGATCCGCTCTAC
CCCCATCATTTGATACAATACAAACGCCAGGGCTAAAAACACGGAGCAACTTTCCATCCATATGGACACTGAGAA
GCTGGCACGGTAATATTTCTTGTCACATCAACCCGTTTAACGTTTTGCTTCTGACGTACCCAGTATCTACACTCC
ATTACTACCATACCGCTATGGGTATTCTTTGGCTGGCCCAGCCGGCAGCGTGGCCCTTGAAAGCTTTACAGCGCA
TAGATGATATGGATTGCTTGCGTCAAAGACTTGACTATCATGCGACTGAAATCTGCGCGTTGGCCATTTCAAGTG
AGAGTGCGTCTGTATGGGTCAATGCTTTTGGGCCGGTCGCCTTTTGTAAGTCTCATTAAGCACACAAGCTCCCTT
ACTCTGGAGTAGGTCCTGATATGTCTCTGTAGGTGGAACCTGGCTTCAAAGCACACCAAGGCGTGTGGAATTAGT
CGAGGAGGTAGAGAAATGGGGGAATGTTGCGGGATGGCCAGTATCAATCATTACAGCTGCACTGTCTCCCTCCTC
CTCCTCCTCCTCCTCCTCCCTGAATACCACCCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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